RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 TMEM262E9PQX1 116 aa15□□□□□ -0.01
COL18A1-204ENST00000400337 SUMO2P61956 95 aaKnown RBP15□□□□□ -0.01
COL18A1-204ENST00000400337 LHFPL4Q7Z7J7 247 aa15□□□□□ -0.01
COL18A1-204ENST00000400337 SSBP4Q9BWG4 385 aaPredicted RBP15□□□□□ -0.01
COL18A1-204ENST00000400337 FABP5P3A8MUU1 101 aa15□□□□□ -0.01
COL18A1-204ENST00000400337 ORMDL3Q8N138 153 aa15□□□□□ -0.01
COL18A1-204ENST00000400337 OCC1Q8TAD7 63 aa15□□□□□ -0.01
COL18A1-204ENST00000400337 MBD3L1Q8WWY6 194 aa15□□□□□ -0.01
COL18A1-204ENST00000400337 MPDZO75970 2070 aa15□□□□□ -0.01
COL18A1-204ENST00000400337 TRAV5A0A0B4J249 113 aa15□□□□□ -0.01
COL18A1-204ENST00000400337 HOXA5P20719 270 aa15□□□□□ -0.01
COL18A1-204ENST00000400337 SLC50A1Q9BRV3 221 aa15□□□□□ -0.01
COL18A1-204ENST00000400337 A0A1B0GW15 77 aa14.99□□□□□ -0.01
COL18A1-204ENST00000400337 HGFACQ04756 655 aa14.99□□□□□ -0.01
COL18A1-204ENST00000400337 NMSQ5H8A3 153 aa14.99□□□□□ -0.01
COL18A1-204ENST00000400337 CYTL1Q9NRR1 136 aa14.99□□□□□ -0.01
COL18A1-204ENST00000400337 PRSS22Q9GZN4 317 aa14.99□□□□□ -0.01
COL18A1-204ENST00000400337 PPP1R17O96001 155 aa14.99□□□□□ -0.01
COL18A1-204ENST00000400337 IGHG3P01860 377 aa14.99□□□□□ -0.01
COL18A1-204ENST00000400337 KIR3DL3Q8N743 410 aa14.99□□□□□ -0.01
COL18A1-204ENST00000400337 LINC01587Q99440 93 aa14.99□□□□□ -0.01
COL18A1-204ENST00000400337 TRAV3A0A0B4J244 114 aa14.99□□□□□ -0.01
COL18A1-204ENST00000400337 PRB4P10163 310 aaPredicted RBP14.99□□□□□ -0.01
COL18A1-204ENST00000400337 Q6P435 159 aa14.99□□□□□ -0.01
COL18A1-204ENST00000400337 Q6ZS92 163 aa14.99□□□□□ -0.01
COL18A1-204ENST00000400337 SCGB3A1Q96QR1 104 aa14.99□□□□□ -0.01
COL18A1-204ENST00000400337 VDAC2P45880 294 aaPredicted RBP14.99□□□□□ -0.01
COL18A1-204ENST00000400337 GGTLC1Q9BX51 225 aa14.99□□□□□ -0.01
COL18A1-204ENST00000400337 ZNF257Q9Y2Q1 563 aa14.99□□□□□ -0.01
COL18A1-204ENST00000400337 KLRD1Q13241 179 aa14.98□□□□□ -0.01
COL18A1-204ENST00000400337 ZNF418Q8TF45 676 aaPredicted RBP14.98□□□□□ -0.01
COL18A1-204ENST00000400337 MYOD1P15172 320 aa14.98□□□□□ -0.01
COL18A1-204ENST00000400337 PLAURQ03405 335 aa14.98□□□□□ -0.01
COL18A1-204ENST00000400337 PSG8Q9UQ74 426 aa14.98□□□□□ -0.01
COL18A1-204ENST00000400337 SNAI2O43623 268 aa14.98□□□□□ -0.01
COL18A1-204ENST00000400337 LOC105371267A0A1B0GV96 52 aa14.98□□□□□ -0.01
COL18A1-204ENST00000400337 SERF1AO75920 110 aa14.98□□□□□ -0.01
COL18A1-204ENST00000400337 EFNA4P52798 201 aa14.98□□□□□ -0.01
COL18A1-204ENST00000400337 FOXL2NBQ6ZUU3 175 aa14.98□□□□□ -0.01
COL18A1-204ENST00000400337 PEMTQ9UBM1 199 aa14.98□□□□□ -0.01
COL18A1-204ENST00000400337 FER1L5A0AVI2 2057 aa14.98□□□□□ -0.01
COL18A1-204ENST00000400337 PKDREJQ9NTG1 2253 aa14.97□□□□□ -0.01
COL18A1-204ENST00000400337 ZNF474Q6S9Z5 364 aaPredicted RBP14.97□□□□□ -0.01
COL18A1-204ENST00000400337 COQ2Q96H96 371 aa14.97□□□□□ -0.01
COL18A1-204ENST00000400337 FOXC2Q99958 501 aa14.97□□□□□ -0.01
COL18A1-204ENST00000400337 PAX1P15863 534 aa14.97□□□□□ -0.01
COL18A1-204ENST00000400337 VMO1Q7Z5L0 202 aa14.97□□□□□ -0.01
COL18A1-204ENST00000400337 ST6GALNAC6Q969X2 333 aa14.97□□□□□ -0.01
COL18A1-204ENST00000400337 ASCL2Q99929 193 aa14.97□□□□□ -0.01
COL18A1-204ENST00000400337 GSN-AS1Q9NRJ2 163 aa14.97□□□□□ -0.01
COL18A1-204ENST00000400337 PHF3Q92576 2039 aaKnown RBP14.97□□□□□ -0.01
COL18A1-204ENST00000400337 IGHV1-3A0A0C4DH29 117 aa14.97□□□□□ -0.01
COL18A1-204ENST00000400337 ATP5LO75964 103 aa14.97□□□□□ -0.01
COL18A1-204ENST00000400337 C8orf46Q8TAG6 207 aa14.97□□□□□ -0.01
COL18A1-204ENST00000400337 OSTCQ9NRP0 149 aa14.97□□□□□ -0.01
COL18A1-204ENST00000400337 DIDO1Q9BTC0 2240 aaKnown RBP14.97□□□□□ -0.01
COL18A1-204ENST00000400337 GBF1Q92538 1859 aa14.97□□□□□ -0.01
COL18A1-204ENST00000400337 WNT2P09544 360 aa14.96□□□□□ -0.01
COL18A1-204ENST00000400337 ADMP35318 185 aa14.96□□□□□ -0.01
COL18A1-204ENST00000400337 IGKV1D-17A0A075B6S4 117 aa14.96□□□□□ -0.01
COL18A1-204ENST00000400337 LINC00473A8K010 186 aa14.96□□□□□ -0.01
COL18A1-204ENST00000400337 SMIM13P0DJ93 91 aa14.96□□□□□ -0.01
COL18A1-204ENST00000400337 SPATA31B1PQ5VZV4 182 aa14.96□□□□□ -0.01
COL18A1-204ENST00000400337 GAFA1Q96PS6 74 aa14.96□□□□□ -0.01
COL18A1-204ENST00000400337 LINC00205P59089 165 aa14.96□□□□□ -0.02
COL18A1-204ENST00000400337 CD7P09564 240 aa14.95□□□□□ -0.02
COL18A1-204ENST00000400337 FBLN7Q53RD9 439 aa14.95□□□□□ -0.02
COL18A1-204ENST00000400337 TMEM170AQ8WVE7 144 aa14.95□□□□□ -0.02
COL18A1-204ENST00000400337 BEX4Q9NWD9 120 aaPredicted RBP14.95□□□□□ -0.02
COL18A1-204ENST00000400337 CACNA1BQ00975 2339 aa14.95□□□□□ -0.02
COL18A1-204ENST00000400337 GNLYP22749 145 aa14.95□□□□□ -0.02
COL18A1-204ENST00000400337 LDLRAD2Q5SZI1 272 aa14.95□□□□□ -0.02
COL18A1-204ENST00000400337 TMEM219Q86XT9 240 aa14.95□□□□□ -0.02
COL18A1-204ENST00000400337 C1QL4Q86Z23 238 aa14.95□□□□□ -0.02
COL18A1-204ENST00000400337 COPS9Q8WXC6 57 aa14.95□□□□□ -0.02
COL18A1-204ENST00000400337 RFNGQ9Y644 331 aa14.95□□□□□ -0.02
COL18A1-204ENST00000400337 TRBV6-6A0A0A6YYG2 114 aa14.95□□□□□ -0.02
COL18A1-204ENST00000400337 EMP1P54849 157 aa14.95□□□□□ -0.02
COL18A1-204ENST00000400337 SAMD13Q5VXD3 122 aa14.95□□□□□ -0.02
COL18A1-204ENST00000400337 TEX38Q6PEX7 206 aa14.95□□□□□ -0.02
COL18A1-204ENST00000400337 ST6GALNAC3Q8NDV1 305 aa14.95□□□□□ -0.02
COL18A1-204ENST00000400337 TMEM8BA6NDV4 472 aa14.95□□□□□ -0.02
COL18A1-204ENST00000400337 CA1P00915 261 aaPredicted RBP14.95□□□□□ -0.02
COL18A1-204ENST00000400337 CD5P06127 495 aa14.95□□□□□ -0.02
COL18A1-204ENST00000400337 RNASE1P07998 156 aaKnown RBP14.95□□□□□ -0.02
COL18A1-204ENST00000400337 STAG3L3P0CL85 134 aa14.95□□□□□ -0.02
COL18A1-204ENST00000400337 PPIFP30405 207 aaKnown RBP14.95□□□□□ -0.02
COL18A1-204ENST00000400337 PAX8Q06710 450 aa14.95□□□□□ -0.02
COL18A1-204ENST00000400337 SLC25A48Q6ZT89 311 aaKnown RBP14.95□□□□□ -0.02
COL18A1-204ENST00000400337 MBNL3Q9NUK0 354 aaKnown RBP14.95□□□□□ -0.02
COL18A1-204ENST00000400337 TMEM50AO95807 157 aa14.94□□□□□ -0.02
COL18A1-204ENST00000400337 TPTE2P1Q5T6R2 138 aa14.94□□□□□ -0.02
COL18A1-204ENST00000400337 RPP25LQ8N5L8 163 aaKnown RBP14.94□□□□□ -0.02
COL18A1-204ENST00000400337 TMEM167AQ8TBQ9 72 aa14.94□□□□□ -0.02
COL18A1-204ENST00000400337 TRAV41A0A0B4J266 112 aa14.94□□□□□ -0.02
COL18A1-204ENST00000400337 C20orf204Q6ZNR8 217 aa14.94□□□□□ -0.02
COL18A1-204ENST00000400337 C11orf44Q8N8P7 122 aa14.94□□□□□ -0.02
COL18A1-204ENST00000400337 HEATR1Q9H583 2144 aaKnown RBP14.93□□□□□ -0.02
COL18A1-204ENST00000400337 TMEM14EPQ6UXP3 125 aa14.93□□□□□ -0.02
COL18A1-204ENST00000400337 TMEM101Q96IK0 257 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms