RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 ST8SIA2Q92186 375 aa6.29□□□□□ -1.4
USP16-202ENST00000399973 OR10C1Q96KK4 312 aa6.29□□□□□ -1.4
USP16-202ENST00000399973 SDHCQ99643 169 aaPredicted RBP6.29□□□□□ -1.4
USP16-202ENST00000399973 GGTLC1Q9BX51 225 aa6.29□□□□□ -1.4
USP16-202ENST00000399973 CACFD1Q9UGQ2 172 aa6.29□□□□□ -1.4
USP16-202ENST00000399973 FLVCR2Q9UPI3 526 aa6.29□□□□□ -1.4
USP16-202ENST00000399973 LOC102724200A0A096LPH7 203 aaPredicted RBP6.28□□□□□ -1.4
USP16-202ENST00000399973 APOHP02749 345 aaPredicted RBP6.28□□□□□ -1.4
USP16-202ENST00000399973 SLC25A4P12235 298 aa6.28□□□□□ -1.4
USP16-202ENST00000399973 ANXA7P20073 488 aaKnown RBP6.28□□□□□ -1.4
USP16-202ENST00000399973 OR10J1P30954 320 aa6.28□□□□□ -1.4
USP16-202ENST00000399973 ODF3L2Q3SX64 289 aa6.28□□□□□ -1.4
USP16-202ENST00000399973 ETFRF1Q6IPR1 90 aa6.28□□□□□ -1.4
USP16-202ENST00000399973 PRSS54Q6PEW0 395 aa6.28□□□□□ -1.4
USP16-202ENST00000399973 NOXA1Q86UR1 476 aa6.28□□□□□ -1.4
USP16-202ENST00000399973 WFDC3Q8IUB2 231 aa6.28□□□□□ -1.4
USP16-202ENST00000399973 OR1S2Q8NGQ3 325 aa6.28□□□□□ -1.4
USP16-202ENST00000399973 OR4X1Q8NH49 305 aa6.28□□□□□ -1.4
USP16-202ENST00000399973 MUC7Q8TAX7 377 aa6.28□□□□□ -1.4
USP16-202ENST00000399973 NARS2Q96I59 477 aaKnown RBP6.28□□□□□ -1.4
USP16-202ENST00000399973 SLC35E1Q96K37 410 aa6.28□□□□□ -1.4
USP16-202ENST00000399973 METTL26Q96S19 204 aa6.28□□□□□ -1.4
USP16-202ENST00000399973 MAGT1Q9H0U3 335 aa6.28□□□□□ -1.4
USP16-202ENST00000399973 TMEM231Q9H6L2 316 aa6.28□□□□□ -1.4
USP16-202ENST00000399973 RABAC1Q9UI14 185 aa6.28□□□□□ -1.4
USP16-202ENST00000399973 TMED3Q9Y3Q3 217 aa6.28□□□□□ -1.4
USP16-202ENST00000399973 TRAV30A0A087WSZ9 112 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 C9orf170A2RU37 121 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 H3BP45 60 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 DNASE2O00115 360 aaPredicted RBP6.27□□□□□ -1.41
USP16-202ENST00000399973 WRBO00258 174 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 ADAP1O75689 374 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 SCGB1D2O95969 90 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 IGKV1-17P01599 117 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 IL4P05112 153 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 IGLC1P0CG04 106 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 RPL35AP18077 110 aaKnown RBP6.27□□□□□ -1.41
USP16-202ENST00000399973 NPPCP23582 126 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 BTCP35070 178 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 UBE2MP61081 183 aaKnown RBP6.27□□□□□ -1.41
USP16-202ENST00000399973 ZNF124Q15973 351 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 C4orf48Q5BLP8 95 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 GGNBP1Q5YKI7 109 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 ZFAND6Q6FIF0 208 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 LINC00322Q6ZN03 302 aaPredicted RBP6.27□□□□□ -1.41
USP16-202ENST00000399973 LYG2Q86SG7 212 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 APRG1Q8IVJ8 170 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 LRTM2Q8N967 370 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 STXBP6Q8NFX7 210 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 COQ8AQ8NI60 647 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 Q8WTZ3 238 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 NPIPB3Q92617 1050 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 CITED4Q96RK1 184 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 C7orf50Q9BRJ6 194 aaKnown RBP6.27□□□□□ -1.41
USP16-202ENST00000399973 C20orf85Q9H1P6 137 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 MAP6D1Q9H9H5 199 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 U3KQ87 197 aa6.27□□□□□ -1.41
USP16-202ENST00000399973 A0A1W2PS18 150 aa6.26□□□□□ -1.41
USP16-202ENST00000399973 ZFP92A6NM28 416 aa6.26□□□□□ -1.41
USP16-202ENST00000399973 C3orf84H3BNL1 204 aa6.26□□□□□ -1.41
USP16-202ENST00000399973 LYRM1O43325 122 aa6.26□□□□□ -1.41
USP16-202ENST00000399973 MED6O75586 246 aa6.26□□□□□ -1.41
USP16-202ENST00000399973 DFFBO76075 338 aa6.26□□□□□ -1.41
USP16-202ENST00000399973 OR4E1P0C645 316 aa6.26□□□□□ -1.41
USP16-202ENST00000399973 P2RY1P47900 373 aa6.26□□□□□ -1.41
USP16-202ENST00000399973 APOC4P55056 127 aa6.26□□□□□ -1.41
USP16-202ENST00000399973 RAB11AP62491 216 aa6.26□□□□□ -1.41
USP16-202ENST00000399973 PAFAH1B2P68402 229 aa6.26□□□□□ -1.41
USP16-202ENST00000399973 DHRS2Q13268 280 aa6.26□□□□□ -1.41
USP16-202ENST00000399973 GRAMD2BQ96HH9 432 aa6.26□□□□□ -1.41
USP16-202ENST00000399973 PBDC1Q9BVG4 233 aa6.26□□□□□ -1.41
USP16-202ENST00000399973 VSIRQ9H7M9 311 aa6.26□□□□□ -1.41
USP16-202ENST00000399973 TRAV6A0A075B6T7 132 aa6.25□□□□□ -1.41
USP16-202ENST00000399973 MPTX1A8MV57 137 aa6.25□□□□□ -1.41
USP16-202ENST00000399973 FAM90A26D6RGX4 464 aa6.25□□□□□ -1.41
USP16-202ENST00000399973 SYNGR2O43760 224 aa6.25□□□□□ -1.41
USP16-202ENST00000399973 SSSCA1O60232 199 aa6.25□□□□□ -1.41
USP16-202ENST00000399973 PITX3O75364 302 aa6.25□□□□□ -1.41
USP16-202ENST00000399973 TOMM40O96008 361 aa6.25□□□□□ -1.41
USP16-202ENST00000399973 IFNA21P01568 189 aa6.25□□□□□ -1.41
USP16-202ENST00000399973 HNRNPCP07910 306 aaKnown RBP eCLIP6.25□□□□□ -1.41
USP16-202ENST00000399973 SLC25A6P12236 298 aa6.25□□□□□ -1.41
USP16-202ENST00000399973 LYL1P12980 280 aa6.25□□□□□ -1.41
USP16-202ENST00000399973 USF2Q15853 346 aaPredicted RBP6.25□□□□□ -1.41
USP16-202ENST00000399973 DEFB135Q30KP9 77 aa6.25□□□□□ -1.41
USP16-202ENST00000399973 CNPY1Q3B7I2 92 aa6.25□□□□□ -1.41
USP16-202ENST00000399973 SPANXN5Q5MJ07 72 aa6.25□□□□□ -1.41
USP16-202ENST00000399973 FAM90A2PQ658T7 463 aa6.25□□□□□ -1.41
USP16-202ENST00000399973 LILRB2Q8N423 598 aa6.25□□□□□ -1.41
USP16-202ENST00000399973 CIB3Q96Q77 187 aaPredicted RBP6.25□□□□□ -1.41
USP16-202ENST00000399973 MS4A6AQ9H2W1 248 aa6.25□□□□□ -1.41
USP16-202ENST00000399973 EDA2RQ9HAV5 297 aa6.25□□□□□ -1.41
USP16-202ENST00000399973 SMCO3A2RU48 225 aa6.24□□□□□ -1.41
USP16-202ENST00000399973 CCSO14618 274 aa6.24□□□□□ -1.41
USP16-202ENST00000399973 CD5P06127 495 aa6.24□□□□□ -1.41
USP16-202ENST00000399973 ZNF688P0C7X2 276 aa6.24□□□□□ -1.41
USP16-202ENST00000399973 RD3LP0DJH9 198 aa6.24□□□□□ -1.41
USP16-202ENST00000399973 PSG1P11464 419 aa6.24□□□□□ -1.41
USP16-202ENST00000399973 CRYBB3P26998 211 aa6.24□□□□□ -1.41
USP16-202ENST00000399973 NKX2-1P43699 371 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms