RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 LOC285556D6RIA3 1793 aa9.97□□□□□ -0.81
CACNA1C-213ENST00000399629 SYNJ2BPP57105 145 aa9.97□□□□□ -0.81
CACNA1C-213ENST00000399629 DLX4Q92988 240 aaPredicted RBP9.97□□□□□ -0.81
CACNA1C-213ENST00000399629 COL4A1P02462 1669 aa9.97□□□□□ -0.81
CACNA1C-213ENST00000399629 PRDM13Q9H4Q3 707 aa9.97□□□□□ -0.81
CACNA1C-213ENST00000399629 SRSF1Q07955 248 aaKnown RBP eCLIP9.97□□□□□ -0.81
CACNA1C-213ENST00000399629 OR5A1Q8NGJ0 315 aa9.97□□□□□ -0.81
CACNA1C-213ENST00000399629 SBF2Q86WG5 1849 aa9.96□□□□□ -0.81
CACNA1C-213ENST00000399629 BUB1B-PAK6H3BSN5 160 aa9.96□□□□□ -0.81
CACNA1C-213ENST00000399629 LINC00271P0C7V0 271 aa9.96□□□□□ -0.81
CACNA1C-213ENST00000399629 PLP1P60201 277 aa9.96□□□□□ -0.81
CACNA1C-213ENST00000399629 NABP1Q96AH0 204 aa9.96□□□□□ -0.81
CACNA1C-213ENST00000399629 SCN2AQ99250 2005 aa9.96□□□□□ -0.81
CACNA1C-213ENST00000399629 ZNF236Q9UL36 1845 aa9.96□□□□□ -0.81
CACNA1C-213ENST00000399629 J3QLI3 93 aa9.96□□□□□ -0.81
CACNA1C-213ENST00000399629 ZNF506Q5JVG8 444 aa9.96□□□□□ -0.81
CACNA1C-213ENST00000399629 TMEM144Q7Z5S9 345 aa9.96□□□□□ -0.81
CACNA1C-213ENST00000399629 TRGC2P03986 189 aa9.96□□□□□ -0.82
CACNA1C-213ENST00000399629 CYSLTR1Q9Y271 337 aa9.96□□□□□ -0.82
CACNA1C-213ENST00000399629 PKIAP61925 76 aa9.96□□□□□ -0.82
CACNA1C-213ENST00000399629 SS18Q15532 418 aa9.96□□□□□ -0.82
CACNA1C-213ENST00000399629 GGNQ86UU5 652 aa9.96□□□□□ -0.82
CACNA1C-213ENST00000399629 C10orf126Q8N4M7 172 aa9.96□□□□□ -0.82
CACNA1C-213ENST00000399629 E7EQL1 145 aa9.96□□□□□ -0.82
CACNA1C-213ENST00000399629 CXCL2P19875 107 aa9.96□□□□□ -0.82
CACNA1C-213ENST00000399629 TMEM155Q4W5P6 130 aa9.95□□□□□ -0.82
CACNA1C-213ENST00000399629 TTC9CQ8N5M4 171 aa9.95□□□□□ -0.82
CACNA1C-213ENST00000399629 PSG8Q9UQ74 426 aa9.95□□□□□ -0.82
CACNA1C-213ENST00000399629 PSG1P11464 419 aa9.95□□□□□ -0.82
CACNA1C-213ENST00000399629 PRSS33Q8NF86 280 aa9.95□□□□□ -0.82
CACNA1C-213ENST00000399629 A0A0G2JMZ2 1700 aa9.95□□□□□ -0.82
CACNA1C-213ENST00000399629 LRRC37A2A6NM11 1700 aa9.95□□□□□ -0.82
CACNA1C-213ENST00000399629 ERCC8Q13216 396 aa9.95□□□□□ -0.82
CACNA1C-213ENST00000399629 C1orf122Q6ZSJ8 110 aa9.95□□□□□ -0.82
CACNA1C-213ENST00000399629 RMI2Q96E14 147 aa9.95□□□□□ -0.82
CACNA1C-213ENST00000399629 LYZL4Q96KX0 146 aa9.95□□□□□ -0.82
CACNA1C-213ENST00000399629 TRBV6-7A0A0A0MS04 114 aa9.95□□□□□ -0.82
CACNA1C-213ENST00000399629 EVI2AP22794 236 aa9.95□□□□□ -0.82
CACNA1C-213ENST00000399629 FGFBP3Q8TAT2 258 aa9.95□□□□□ -0.82
CACNA1C-213ENST00000399629 IL36BQ9NZH7 164 aa9.95□□□□□ -0.82
CACNA1C-213ENST00000399629 IGKV2-40A0A087WW87 121 aaPredicted RBP9.95□□□□□ -0.82
CACNA1C-213ENST00000399629 RAMP3O60896 148 aa9.95□□□□□ -0.82
CACNA1C-213ENST00000399629 WISP1O95388 367 aa9.95□□□□□ -0.82
CACNA1C-213ENST00000399629 IGKV2D-40P01614 121 aaPredicted RBP9.95□□□□□ -0.82
CACNA1C-213ENST00000399629 ATOH7Q8N100 152 aa9.95□□□□□ -0.82
CACNA1C-213ENST00000399629 SDHCQ99643 169 aaPredicted RBP9.94□□□□□ -0.82
CACNA1C-213ENST00000399629 RNF5Q99942 180 aa9.94□□□□□ -0.82
CACNA1C-213ENST00000399629 DICER1Q9UPY3 1922 aaKnown RBP9.94□□□□□ -0.82
CACNA1C-213ENST00000399629 OR10W1Q8NGF6 305 aa9.94□□□□□ -0.82
CACNA1C-213ENST00000399629 C5orf64Q2M2E5 130 aa9.94□□□□□ -0.82
CACNA1C-213ENST00000399629 IGHV3-64A0A075B6Q5 118 aa9.94□□□□□ -0.82
CACNA1C-213ENST00000399629 A0A0U1RRA0 63 aa9.94□□□□□ -0.82
CACNA1C-213ENST00000399629 INS-IGF2F8WCM5 200 aa9.94□□□□□ -0.82
CACNA1C-213ENST00000399629 NBL1P41271 181 aa9.94□□□□□ -0.82
CACNA1C-213ENST00000399629 SLC17A3O00476 420 aa9.94□□□□□ -0.82
CACNA1C-213ENST00000399629 CA1P00915 261 aaPredicted RBP9.94□□□□□ -0.82
CACNA1C-213ENST00000399629 HEPN1Q6WQI6 88 aa9.94□□□□□ -0.82
CACNA1C-213ENST00000399629 ZFC3H1O60293 1989 aaKnown RBP9.94□□□□□ -0.82
CACNA1C-213ENST00000399629 OTOFQ9HC10 1997 aa9.93□□□□□ -0.82
CACNA1C-213ENST00000399629 SRRM4A7MD48 611 aaKnown RBP9.93□□□□□ -0.82
CACNA1C-213ENST00000399629 PRB4P10163 310 aaPredicted RBP9.93□□□□□ -0.82
CACNA1C-213ENST00000399629 LHFPL4Q7Z7J7 247 aa9.93□□□□□ -0.82
CACNA1C-213ENST00000399629 EPDR1Q9UM22 224 aa9.93□□□□□ -0.82
CACNA1C-213ENST00000399629 NAPSAO96009 420 aa9.93□□□□□ -0.82
CACNA1C-213ENST00000399629 UCP1P25874 307 aa9.93□□□□□ -0.82
CACNA1C-213ENST00000399629 PAX2Q02962 417 aa9.93□□□□□ -0.82
CACNA1C-213ENST00000399629 GAFA1Q96PS6 74 aa9.93□□□□□ -0.82
CACNA1C-213ENST00000399629 REG4Q9BYZ8 158 aa9.93□□□□□ -0.82
CACNA1C-213ENST00000399629 IFT22Q9H7X7 185 aa9.93□□□□□ -0.82
CACNA1C-213ENST00000399629 IGHV1-69DA0A0B4J2H0 117 aa9.93□□□□□ -0.82
CACNA1C-213ENST00000399629 IGHV1-69P01742 117 aa9.93□□□□□ -0.82
CACNA1C-213ENST00000399629 DANCRP0C864 163 aa9.93□□□□□ -0.82
CACNA1C-213ENST00000399629 CFHR3Q02985 330 aa9.93□□□□□ -0.82
CACNA1C-213ENST00000399629 SLC25A48Q6ZT89 311 aaKnown RBP9.93□□□□□ -0.82
CACNA1C-213ENST00000399629 MYOFQ9NZM1 2061 aa9.93□□□□□ -0.82
CACNA1C-213ENST00000399629 SCN8AQ9UQD0 1980 aa9.93□□□□□ -0.82
CACNA1C-213ENST00000399629 IGHV4-39P01824 125 aa9.93□□□□□ -0.82
CACNA1C-213ENST00000399629 SELLP14151 372 aa9.93□□□□□ -0.82
CACNA1C-213ENST00000399629 ATP5G3P48201 142 aa9.93□□□□□ -0.82
CACNA1C-213ENST00000399629 DEFB131AP59861 70 aa9.93□□□□□ -0.82
CACNA1C-213ENST00000399629 MORN3Q6PF18 240 aaPredicted RBP9.93□□□□□ -0.82
CACNA1C-213ENST00000399629 NPDC1Q9NQX5 325 aaPredicted RBP9.93□□□□□ -0.82
CACNA1C-213ENST00000399629 CHTOPQ9Y3Y2 248 aaKnown RBP9.92□□□□□ -0.82
CACNA1C-213ENST00000399629 IZUMO1RA6ND01 250 aa9.92□□□□□ -0.82
CACNA1C-213ENST00000399629 SRRM5B3KS81 715 aa9.92□□□□□ -0.82
CACNA1C-213ENST00000399629 F2Z2F3 143 aa9.92□□□□□ -0.82
CACNA1C-213ENST00000399629 ZNF561-AS1K7EIQ3 104 aa9.92□□□□□ -0.82
CACNA1C-213ENST00000399629 PYYP10082 97 aa9.92□□□□□ -0.82
CACNA1C-213ENST00000399629 CBLN1P23435 193 aa9.92□□□□□ -0.82
CACNA1C-213ENST00000399629 TMEM95Q3KNT9 176 aa9.92□□□□□ -0.82
CACNA1C-213ENST00000399629 LYPD2Q6UXB3 125 aa9.92□□□□□ -0.82
CACNA1C-213ENST00000399629 TRAV2A0A0B4J234 112 aa9.92□□□□□ -0.82
CACNA1C-213ENST00000399629 GZMBP10144 247 aa9.92□□□□□ -0.82
CACNA1C-213ENST00000399629 DUTP33316 252 aaKnown RBP9.92□□□□□ -0.82
CACNA1C-213ENST00000399629 OR2K2Q8NGT1 345 aa9.92□□□□□ -0.82
CACNA1C-213ENST00000399629 FLVCR1-AS1Q8TAF5 88 aa9.92□□□□□ -0.82
CACNA1C-213ENST00000399629 MESP1Q9BRJ9 268 aa9.92□□□□□ -0.82
CACNA1C-213ENST00000399629 UQCR10Q9UDW1 63 aa9.92□□□□□ -0.82
CACNA1C-213ENST00000399629 PIKFYVEQ9Y2I7 2098 aa9.92□□□□□ -0.82
CACNA1C-213ENST00000399629 HBDP02042 147 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms