RNA–Protein interactions for RNA: ENST00000399595.5

CACNA1C-206, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-206ENST00000399595 A0A1W2PRE2 83 aa9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 SOCS3O14543 225 aa9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 SEC61GP60059 68 aa9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 SPTA1P02549 2419 aa9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 NBL1P41271 181 aa9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 MPV17L2Q567V2 206 aa9.38□□□□□ -0.91
CACNA1C-206ENST00000399595 PFN2P35080 140 aa9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 ACTL10Q5JWF8 245 aa9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 LAMB1P07942 1786 aa9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 STRCQ7RTU9 1775 aa9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 SELLP14151 372 aa9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 TCF15Q12870 199 aa9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 ZIC1Q15915 447 aa9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 KLF14Q8TD94 323 aaPredicted RBP9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 OTORQ9NRC9 128 aa9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 MRPS18AQ9NVS2 196 aaKnown RBP9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 DICER1Q9UPY3 1922 aaKnown RBP9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 MYOD1P15172 320 aa9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 MPLKIPQ8TAP9 179 aa9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 IFI27L2Q9H2X8 130 aa9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 DLL3Q9NYJ7 618 aa9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 RNF223E7ERA6 249 aa9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 MMP23AO75900 390 aa9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 PRSS23O95084 383 aa9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 EGR2P11161 476 aaPredicted RBP9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 RNF183Q96D59 192 aa9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 CHAC1Q9BUX1 264 aa9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 SMPXQ9UHP9 88 aa9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 ATG2BQ96BY7 2078 aa9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 NXPH4O95158 308 aa9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 DEFB130BP0DP73 79 aa9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 DEFB130AP0DP74 79 aa9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 CACNG8Q8WXS5 425 aa9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 C1orf159Q96HA4 380 aa9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 ASCL2Q99929 193 aa9.37□□□□□ -0.91
CACNA1C-206ENST00000399595 PSG4Q00888 419 aa9.36□□□□□ -0.91
CACNA1C-206ENST00000399595 ZNF638Q14966 1978 aaKnown RBP9.36□□□□□ -0.91
CACNA1C-206ENST00000399595 TRBV5-5A0A0J9YX44 114 aa9.36□□□□□ -0.91
CACNA1C-206ENST00000399595 HEPN1Q6WQI6 88 aa9.36□□□□□ -0.91
CACNA1C-206ENST00000399595 PLEKHB2Q96CS7 222 aa9.36□□□□□ -0.91
CACNA1C-206ENST00000399595 SLC25A38Q96DW6 304 aa9.36□□□□□ -0.91
CACNA1C-206ENST00000399595 NRTNQ99748 197 aa9.36□□□□□ -0.91
CACNA1C-206ENST00000399595 SMIM2Q9BVW6 85 aa9.36□□□□□ -0.91
CACNA1C-206ENST00000399595 PLAC1Q9HBJ0 212 aa9.36□□□□□ -0.91
CACNA1C-206ENST00000399595 DPM3Q9P2X0 92 aa9.36□□□□□ -0.91
CACNA1C-206ENST00000399595 ZNF561-AS1K7EIQ3 104 aa9.36□□□□□ -0.91
CACNA1C-206ENST00000399595 EFEMP2O95967 443 aa9.36□□□□□ -0.91
CACNA1C-206ENST00000399595 ID3Q02535 119 aa9.36□□□□□ -0.91
CACNA1C-206ENST00000399595 ERCC8Q13216 396 aa9.36□□□□□ -0.91
CACNA1C-206ENST00000399595 ZIC4Q8N9L1 334 aa9.36□□□□□ -0.91
CACNA1C-206ENST00000399595 JPT1Q9UK76 154 aa9.36□□□□□ -0.91
CACNA1C-206ENST00000399595 TMEM158Q8WZ71 300 aa9.36□□□□□ -0.91
CACNA1C-206ENST00000399595 SHANK3Q9BYB0 1731 aa9.36□□□□□ -0.91
CACNA1C-206ENST00000399595 MYO18AQ92614 2054 aaKnown RBP9.35□□□□□ -0.91
CACNA1C-206ENST00000399595 TAF1P21675 1872 aa9.35□□□□□ -0.91
CACNA1C-206ENST00000399595 B4DSR2 109 aa9.35□□□□□ -0.91
CACNA1C-206ENST00000399595 KLF17Q5JT82 389 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-206ENST00000399595 FAM201AQ5SY85 155 aa9.35□□□□□ -0.91
CACNA1C-206ENST00000399595 PLPPR1Q8TBJ4 325 aa9.35□□□□□ -0.91
CACNA1C-206ENST00000399595 NABP1Q96AH0 204 aa9.35□□□□□ -0.91
CACNA1C-206ENST00000399595 TTC3P53804 2025 aa9.35□□□□□ -0.91
CACNA1C-206ENST00000399595 FOXS1O43638 330 aa9.35□□□□□ -0.91
CACNA1C-206ENST00000399595 CT83Q5H943 113 aa9.35□□□□□ -0.91
CACNA1C-206ENST00000399595 SPXQ9BT56 116 aa9.35□□□□□ -0.91
CACNA1C-206ENST00000399595 SHROOM3Q8TF72 1996 aa9.35□□□□□ -0.91
CACNA1C-206ENST00000399595 MSGN1A6NI15 193 aa9.35□□□□□ -0.91
CACNA1C-206ENST00000399595 UBE2BP63146 152 aa9.35□□□□□ -0.91
CACNA1C-206ENST00000399595 SCARF2Q96GP6 870 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-206ENST00000399595 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-206ENST00000399595 CXCL1P09341 107 aa9.35□□□□□ -0.91
CACNA1C-206ENST00000399595 CMC4P56277 68 aaPredicted RBP9.35□□□□□ -0.91
CACNA1C-206ENST00000399595 Q6ZT83 130 aa9.35□□□□□ -0.91
CACNA1C-206ENST00000399595 ECM29Q5VYK3 1845 aa9.34□□□□□ -0.91
CACNA1C-206ENST00000399595 NUP205Q92621 2012 aa9.34□□□□□ -0.91
CACNA1C-206ENST00000399595 RPL34P49207 117 aaKnown RBP9.34□□□□□ -0.91
CACNA1C-206ENST00000399595 KNTC1P50748 2209 aa9.34□□□□□ -0.91
CACNA1C-206ENST00000399595 GVINP1Q7Z2Y8 2422 aa9.34□□□□□ -0.91
CACNA1C-206ENST00000399595 LINC01356Q8N9X3 169 aa9.34□□□□□ -0.91
CACNA1C-206ENST00000399595 OSR1Q8TAX0 266 aaPredicted RBP9.34□□□□□ -0.91
CACNA1C-206ENST00000399595 FAM231BA6NCW3 169 aa9.34□□□□□ -0.91
CACNA1C-206ENST00000399595 PILRAQ9UKJ1 303 aa9.34□□□□□ -0.91
CACNA1C-206ENST00000399595 FABP5P3A8MUU1 101 aa9.34□□□□□ -0.91
CACNA1C-206ENST00000399595 ARPC1AQ92747 370 aa9.34□□□□□ -0.91
CACNA1C-206ENST00000399595 GAGE7O76087 117 aa9.34□□□□□ -0.91
CACNA1C-206ENST00000399595 GAGE12FP0CL80 117 aa9.34□□□□□ -0.91
CACNA1C-206ENST00000399595 GAGE12GP0CL81 117 aa9.34□□□□□ -0.91
CACNA1C-206ENST00000399595 GAGE12IP0CL82 117 aa9.34□□□□□ -0.91
CACNA1C-206ENST00000399595 AZU1P20160 251 aa9.34□□□□□ -0.91
CACNA1C-206ENST00000399595 ZNFX1Q9P2E3 1918 aaKnown RBP9.34□□□□□ -0.92
CACNA1C-206ENST00000399595 FAM90A10PA6NDY2 464 aa9.33□□□□□ -0.92
CACNA1C-206ENST00000399595 FAM90A20PA6NIJ5 464 aa9.33□□□□□ -0.92
CACNA1C-206ENST00000399595 FAM90A8PA6NJQ4 464 aa9.33□□□□□ -0.92
CACNA1C-206ENST00000399595 FAM90A13PP0C7W8 464 aa9.33□□□□□ -0.92
CACNA1C-206ENST00000399595 FAM90A24PP0C7X0 464 aa9.33□□□□□ -0.92
CACNA1C-206ENST00000399595 SLC25A16P16260 332 aa9.33□□□□□ -0.92
CACNA1C-206ENST00000399595 PMVKQ15126 192 aa9.33□□□□□ -0.92
CACNA1C-206ENST00000399595 RASL10AQ92737 203 aa9.33□□□□□ -0.92
CACNA1C-206ENST00000399595 CDK5RAP2Q96SN8 1893 aa9.33□□□□□ -0.92
CACNA1C-206ENST00000399595 CRLF1O75462 422 aa9.33□□□□□ -0.92
CACNA1C-206ENST00000399595 IGLV3-16A0A075B6K0 115 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms