RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 PLXNB1O43157 2135 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 CD99P14209 185 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 SUB1P53999 127 aaKnown RBP eCLIP4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 ZNF345Q14585 488 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 OR8B8Q15620 311 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 CLEC12BQ2HXU8 276 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 FA2HQ7L5A8 372 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 LINC01551Q86U37 167 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 ZNF695Q8IW36 515 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 OR2K2Q8NGT1 345 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 TM2D1Q9BX74 207 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 MBNL3Q9NUK0 354 aaKnown RBP4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 PRNDQ9UKY0 176 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 ZFP30Q9Y2G7 519 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 DEDDO75618 318 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 CDS2O95674 445 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 IFNA17P01571 189 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 PGA5P0DJD9 388 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 PSG1P11464 419 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 PSG2P11465 335 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 RAB5AP20339 215 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 MDKP21741 143 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 CTRLP40313 264 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 FAM201AQ5SY85 155 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 TPTE2P1Q5T6R2 138 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 RPRMLQ8N4K4 120 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 SUMF2Q8NBJ7 301 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 PTPRBP23467 1997 aa4.96□□□□□ -1.61
TRAPPC13-202ENST00000399438 C3orf85A0A1B0GTC6 90 aa4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 LOC102725191A0A1B0GVB3 256 aa4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 ZNF727A8MUV8 499 aa4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 TSPAN15O95858 294 aa4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 CTSDP07339 412 aaPredicted RBP4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 PIK3CD-AS1Q5SR53 167 aa4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 NCMAPQ5T1S8 102 aa4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 WDR86Q86TI4 376 aa4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 OR10G7Q8NGN6 311 aa4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 IGFBPL1Q8WX77 278 aa4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 NRIP2Q9BQI9 281 aa4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 TNRC6AQ8NDV7 1962 aaKnown RBP4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 PTPRQQ9UMZ3 2332 aa4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 MPPED1O15442 326 aa4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 MPV17P39210 176 aa4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 CYCSP99999 105 aaKnown RBP4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 PLP2Q04941 152 aa4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 SRSF9Q13242 221 aaKnown RBP eCLIP4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 ZNF343Q6P1L6 599 aa4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 Q6ZRM9 215 aa4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 PNKDQ8N490 385 aa4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 FDCSPQ8NFU4 85 aa4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 OR5C1Q8NGR4 320 aa4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 LEAP2Q969E1 77 aa4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 GPR82Q96P67 336 aa4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 ERG28Q9UKR5 140 aa4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 CENPEQ02224 2701 aa4.96□□□□□ -1.62
TRAPPC13-202ENST00000399438 ZNF724A8MTY0 619 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 CRYBA1P05813 215 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 MED14OSP0DP75 135 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 GNG5P63218 68 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 ZNF816Q0VGE8 651 aaPredicted RBP4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 IL15RAQ13261 267 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 SLC10A1Q14973 349 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 ZFAND6Q6FIF0 208 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 FOXL2NBQ6ZUU3 175 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 MKXQ8IYA7 352 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 OR1J1Q8NGS3 322 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 RXFP4Q8TDU9 374 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 MBD6Q96DN6 1003 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 TMEM126AQ9H061 195 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 MRPL27Q9P0M9 148 aaKnown RBP4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 ANAPC10Q9UM13 185 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 CUBNO60494 3623 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 CHD3Q12873 2000 aaKnown RBP4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 IGHV3OR15-7A0A075B7D8 119 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 DYNLT3P51808 116 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 PCBD1P61457 104 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 PRB3Q04118 309 aaPredicted RBP4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 DEFB109BQ30KR1 87 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 SPRNQ5BIV9 151 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 OR2G3Q8NGZ4 309 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 AQP10Q96PS8 301 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 HSPB9Q9BQS6 159 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 TRAPPC2LQ9UL33 140 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 ZFYVE26Q68DK2 2539 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 FAM236DA0A1B0GTK5 79 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 FAM236CP0DP71 79 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 RPL7P18124 248 aaKnown RBP4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 LMO1P25800 156 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 SRSF4Q08170 494 aaKnown RBP4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 AKR1C8PQ5T2L2 129 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 LCN15Q6UWW0 184 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 SVBPQ8N300 66 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 OR1L1Q8NH94 360 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 SLC25A40Q8TBP6 338 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 PRSS22Q9GZN4 317 aa4.95□□□□□ -1.62
TRAPPC13-202ENST00000399438 TRBV6-7A0A0A0MS04 114 aa4.94□□□□□ -1.62
TRAPPC13-202ENST00000399438 TRGV5A0A0B4J1U4 118 aa4.94□□□□□ -1.62
TRAPPC13-202ENST00000399438 KRASP01116 189 aa4.94□□□□□ -1.62
TRAPPC13-202ENST00000399438 CD55P08174 381 aa4.94□□□□□ -1.62
TRAPPC13-202ENST00000399438 ATP6V0CP27449 155 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms