RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 GINS3Q9BRX5 216 aa8.78□□□□□ -1
SMIM11A-201ENST00000399292 HIPK2Q9H2X6 1198 aa8.78□□□□□ -1
SMIM11A-201ENST00000399292 V9GYH0 126 aa8.78□□□□□ -1
SMIM11A-201ENST00000399292 LOC102724200A0A096LPH7 203 aaPredicted RBP8.77□□□□□ -1.01
SMIM11A-201ENST00000399292 PIGBOS1A0A0B4J2F0 54 aa8.77□□□□□ -1.01
SMIM11A-201ENST00000399292 OR4C46A6NHA9 309 aa8.77□□□□□ -1.01
SMIM11A-201ENST00000399292 CLN5O75503 358 aa8.77□□□□□ -1.01
SMIM11A-201ENST00000399292 LYL1P12980 280 aa8.77□□□□□ -1.01
SMIM11A-201ENST00000399292 VAMP1P23763 118 aa8.77□□□□□ -1.01
SMIM11A-201ENST00000399292 SUPT4H1P63272 117 aaKnown RBP8.77□□□□□ -1.01
SMIM11A-201ENST00000399292 SRPXP78539 464 aa8.77□□□□□ -1.01
SMIM11A-201ENST00000399292 ZNF79Q15937 498 aa8.77□□□□□ -1.01
SMIM11A-201ENST00000399292 SPANXN2Q5MJ10 180 aa8.77□□□□□ -1.01
SMIM11A-201ENST00000399292 CASC10Q5T4H9 136 aa8.77□□□□□ -1.01
SMIM11A-201ENST00000399292 ZNF600Q6ZNG1 722 aa8.77□□□□□ -1.01
SMIM11A-201ENST00000399292 LYZL2Q7Z4W2 148 aa8.77□□□□□ -1.01
SMIM11A-201ENST00000399292 TMED4Q7Z7H5 227 aa8.77□□□□□ -1.01
SMIM11A-201ENST00000399292 LGI3Q8N145 548 aa8.77□□□□□ -1.01
SMIM11A-201ENST00000399292 OR4X1Q8NH49 305 aa8.77□□□□□ -1.01
SMIM11A-201ENST00000399292 DEDD2Q8WXF8 326 aa8.77□□□□□ -1.01
SMIM11A-201ENST00000399292 RNF2Q99496 336 aa8.77□□□□□ -1.01
SMIM11A-201ENST00000399292 GGTLC1Q9BX51 225 aa8.77□□□□□ -1.01
SMIM11A-201ENST00000399292 KRTAP3-1Q9BYR8 98 aa8.77□□□□□ -1.01
SMIM11A-201ENST00000399292 FNDC4Q9H6D8 234 aaPredicted RBP8.77□□□□□ -1.01
SMIM11A-201ENST00000399292 EDA2RQ9HAV5 297 aa8.77□□□□□ -1.01
SMIM11A-201ENST00000399292 NDUFA13Q9P0J0 144 aa8.77□□□□□ -1.01
SMIM11A-201ENST00000399292 PUS1Q9Y606 427 aaKnown RBP eCLIP8.77□□□□□ -1.01
SMIM11A-201ENST00000399292 IGHV3-49A0A0A0MS15 119 aa8.76□□□□□ -1.01
SMIM11A-201ENST00000399292 A0A0B4J2A0 478 aa8.76□□□□□ -1.01
SMIM11A-201ENST00000399292 RPS10-NUDT3A0A1W2PQS6 291 aa8.76□□□□□ -1.01
SMIM11A-201ENST00000399292 SCGB2A1O75556 95 aa8.76□□□□□ -1.01
SMIM11A-201ENST00000399292 BMI1P35226 326 aa8.76□□□□□ -1.01
SMIM11A-201ENST00000399292 CCR6P51684 374 aa8.76□□□□□ -1.01
SMIM11A-201ENST00000399292 C2orf83Q53S99 150 aa8.76□□□□□ -1.01
SMIM11A-201ENST00000399292 TMEM128Q5BJH2 165 aa8.76□□□□□ -1.01
SMIM11A-201ENST00000399292 NOXA1Q86UR1 476 aa8.76□□□□□ -1.01
SMIM11A-201ENST00000399292 RNASEH2CQ8TDP1 164 aaKnown RBP8.76□□□□□ -1.01
SMIM11A-201ENST00000399292 SLC25A21Q9BQT8 299 aaPredicted RBP8.76□□□□□ -1.01
SMIM11A-201ENST00000399292 KRTAP17-1Q9BYP8 105 aa8.76□□□□□ -1.01
SMIM11A-201ENST00000399292 RETNQ9HD89 108 aa8.76□□□□□ -1.01
SMIM11A-201ENST00000399292 UBQLN2Q9UHD9 624 aa8.76□□□□□ -1.01
SMIM11A-201ENST00000399292 SHPKQ9UHJ6 478 aa8.76□□□□□ -1.01
SMIM11A-201ENST00000399292 IGHV3OR16-13A0A075B7E8 117 aa8.75□□□□□ -1.01
SMIM11A-201ENST00000399292 TRAV30A0A087WSZ9 112 aa8.75□□□□□ -1.01
SMIM11A-201ENST00000399292 IGHV3-74A0A0B4J1X5 117 aa8.75□□□□□ -1.01
SMIM11A-201ENST00000399292 NXPH3O95157 252 aa8.75□□□□□ -1.01
SMIM11A-201ENST00000399292 CD5P06127 495 aa8.75□□□□□ -1.01
SMIM11A-201ENST00000399292 CMC4P56277 68 aaPredicted RBP8.75□□□□□ -1.01
SMIM11A-201ENST00000399292 PAFAH1B2P68402 229 aa8.75□□□□□ -1.01
SMIM11A-201ENST00000399292 SMCO1Q147U7 214 aa8.75□□□□□ -1.01
SMIM11A-201ENST00000399292 NMSQ5H8A3 153 aa8.75□□□□□ -1.01
SMIM11A-201ENST00000399292 SLC24A4Q8NFF2 622 aa8.75□□□□□ -1.01
SMIM11A-201ENST00000399292 FAM110AQ9BQ89 295 aa8.75□□□□□ -1.01
SMIM11A-201ENST00000399292 MRPL36Q9P0J6 103 aaKnown RBP8.75□□□□□ -1.01
SMIM11A-201ENST00000399292 U3KQ87 197 aa8.75□□□□□ -1.01
SMIM11A-201ENST00000399292 IGKV3-7A0A075B6H7 116 aa8.74□□□□□ -1.01
SMIM11A-201ENST00000399292 A0A1B0GU03 582 aa8.74□□□□□ -1.01
SMIM11A-201ENST00000399292 IFNA10P01566 189 aa8.74□□□□□ -1.01
SMIM11A-201ENST00000399292 APOHP02749 345 aaPredicted RBP8.74□□□□□ -1.01
SMIM11A-201ENST00000399292 SLC25A4P12235 298 aa8.74□□□□□ -1.01
SMIM11A-201ENST00000399292 NPPCP23582 126 aa8.74□□□□□ -1.01
SMIM11A-201ENST00000399292 TFPI2P48307 235 aa8.74□□□□□ -1.01
SMIM11A-201ENST00000399292 TNFRSF9Q07011 255 aa8.74□□□□□ -1.01
SMIM11A-201ENST00000399292 FAM90A2PQ658T7 463 aa8.74□□□□□ -1.01
SMIM11A-201ENST00000399292 ETFRF1Q6IPR1 90 aa8.74□□□□□ -1.01
SMIM11A-201ENST00000399292 TCF24Q7RTU0 167 aa8.74□□□□□ -1.01
SMIM11A-201ENST00000399292 GBGT1Q8N5D6 347 aa8.74□□□□□ -1.01
SMIM11A-201ENST00000399292 VSIRQ9H7M9 311 aa8.74□□□□□ -1.01
SMIM11A-201ENST00000399292 HSPB7Q9UBY9 170 aa8.74□□□□□ -1.01
SMIM11A-201ENST00000399292 DUXBA0A1W2PPF3 345 aa8.73□□□□□ -1.01
SMIM11A-201ENST00000399292 A0A1W2PS18 150 aa8.73□□□□□ -1.01
SMIM11A-201ENST00000399292 NPY1RP25929 384 aa8.73□□□□□ -1.01
SMIM11A-201ENST00000399292 INPP1P49441 399 aa8.73□□□□□ -1.01
SMIM11A-201ENST00000399292 APOC4P55056 127 aa8.73□□□□□ -1.01
SMIM11A-201ENST00000399292 ATP5IP56385 69 aaPredicted RBP8.73□□□□□ -1.01
SMIM11A-201ENST00000399292 RPL11P62913 178 aaKnown RBP8.73□□□□□ -1.01
SMIM11A-201ENST00000399292 ODF3L2Q3SX64 289 aa8.73□□□□□ -1.01
SMIM11A-201ENST00000399292 TIGITQ495A1 244 aa8.73□□□□□ -1.01
SMIM11A-201ENST00000399292 PRSS54Q6PEW0 395 aa8.73□□□□□ -1.01
SMIM11A-201ENST00000399292 LILRB2Q8N423 598 aa8.73□□□□□ -1.01
SMIM11A-201ENST00000399292 OR1S1Q8NH92 325 aa8.73□□□□□ -1.01
SMIM11A-201ENST00000399292 DTD1Q8TEA8 209 aa8.73□□□□□ -1.01
SMIM11A-201ENST00000399292 Q8WTZ3 238 aa8.73□□□□□ -1.01
SMIM11A-201ENST00000399292 ST8SIA2Q92186 375 aa8.73□□□□□ -1.01
SMIM11A-201ENST00000399292 C8orf49Q96NF6 230 aa8.73□□□□□ -1.01
SMIM11A-201ENST00000399292 METTL26Q96S19 204 aa8.73□□□□□ -1.01
SMIM11A-201ENST00000399292 SRRQ9GZT4 340 aa8.73□□□□□ -1.01
SMIM11A-201ENST00000399292 RBKSQ9H477 322 aa8.73□□□□□ -1.01
SMIM11A-201ENST00000399292 TMEM231Q9H6L2 316 aa8.73□□□□□ -1.01
SMIM11A-201ENST00000399292 CSMD3Q7Z407 3707 aa8.73□□□□□ -1.01
SMIM11A-201ENST00000399292 TENM2Q9NT68 2774 aa8.73□□□□□ -1.01
SMIM11A-201ENST00000399292 IGHV3-66A0A0C4DH42 116 aa8.72□□□□□ -1.01
SMIM11A-201ENST00000399292 NAP1L6A6NFF2 107 aa8.72□□□□□ -1.01
SMIM11A-201ENST00000399292 DNASE2O00115 360 aaPredicted RBP8.72□□□□□ -1.01
SMIM11A-201ENST00000399292 UBE2CO00762 179 aa8.72□□□□□ -1.01
SMIM11A-201ENST00000399292 DFFBO76075 338 aa8.72□□□□□ -1.01
SMIM11A-201ENST00000399292 IGKV1-17P01599 117 aa8.72□□□□□ -1.01
SMIM11A-201ENST00000399292 OR10J1P30954 320 aa8.72□□□□□ -1.01
SMIM11A-201ENST00000399292 RND2P52198 227 aa8.72□□□□□ -1.01
SMIM11A-201ENST00000399292 BAK1Q16611 211 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms