RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 H0Y8X5 98 aa10.65□□□□□ -0.7
CCBE1-201ENST00000398179 M0R381 172 aa10.65□□□□□ -0.7
CCBE1-201ENST00000398179 IGLV3-10A0A075B6K4 115 aa10.65□□□□□ -0.7
CCBE1-201ENST00000398179 LYZL2Q7Z4W2 148 aa10.65□□□□□ -0.7
CCBE1-201ENST00000398179 C4orf45Q96LM5 186 aa10.65□□□□□ -0.7
CCBE1-201ENST00000398179 DKK4Q9UBT3 224 aa10.65□□□□□ -0.7
CCBE1-201ENST00000398179 SLC25A29Q8N8R3 303 aa10.65□□□□□ -0.71
CCBE1-201ENST00000398179 PRO1854Q9UHT4 67 aa10.65□□□□□ -0.71
CCBE1-201ENST00000398179 FAM166AQ6J272 317 aa10.64□□□□□ -0.71
CCBE1-201ENST00000398179 Q6ZVH6 145 aa10.64□□□□□ -0.71
CCBE1-201ENST00000398179 TRGV9Q99603 122 aa10.64□□□□□ -0.71
CCBE1-201ENST00000398179 LINC00526Q96FQ7 95 aa10.64□□□□□ -0.71
CCBE1-201ENST00000398179 LY96Q9Y6Y9 160 aa10.64□□□□□ -0.71
CCBE1-201ENST00000398179 IGHV3-43A0A0B4J1X8 118 aa10.64□□□□□ -0.71
CCBE1-201ENST00000398179 ARL14EPLP0DKL9 152 aa10.64□□□□□ -0.71
CCBE1-201ENST00000398179 IGHV3-43DP0DP04 118 aa10.64□□□□□ -0.71
CCBE1-201ENST00000398179 CYTL1Q9NRR1 136 aa10.64□□□□□ -0.71
CCBE1-201ENST00000398179 BADQ92934 168 aa10.64□□□□□ -0.71
CCBE1-201ENST00000398179 TRAV1-1A0A0B4J248 108 aa10.64□□□□□ -0.71
CCBE1-201ENST00000398179 EDIL3O43854 480 aa10.64□□□□□ -0.71
CCBE1-201ENST00000398179 CTGFP29279 349 aa10.64□□□□□ -0.71
CCBE1-201ENST00000398179 PILRAQ9UKJ1 303 aa10.64□□□□□ -0.71
CCBE1-201ENST00000398179 WNT9BO14905 357 aa10.63□□□□□ -0.71
CCBE1-201ENST00000398179 LYZP61626 148 aa10.63□□□□□ -0.71
CCBE1-201ENST00000398179 TMEM52BQ4KMG9 183 aa10.63□□□□□ -0.71
CCBE1-201ENST00000398179 TMUB1Q9BVT8 246 aa10.63□□□□□ -0.71
CCBE1-201ENST00000398179 NAV1Q8NEY1 1877 aa10.63□□□□□ -0.71
CCBE1-201ENST00000398179 NUMA1Q14980 2115 aa10.63□□□□□ -0.71
CCBE1-201ENST00000398179 SRSF12Q8WXF0 261 aaKnown RBP10.63□□□□□ -0.71
CCBE1-201ENST00000398179 PROCRQ9UNN8 238 aa10.63□□□□□ -0.71
CCBE1-201ENST00000398179 SCN11AQ9UI33 1791 aa10.63□□□□□ -0.71
CCBE1-201ENST00000398179 CRPP02741 224 aa10.63□□□□□ -0.71
CCBE1-201ENST00000398179 TRAV3A0A0B4J244 114 aa10.62□□□□□ -0.71
CCBE1-201ENST00000398179 PPP1R32Q7Z5V6 425 aa10.62□□□□□ -0.71
CCBE1-201ENST00000398179 AGPAT4-IT1Q9H0P7 198 aa10.62□□□□□ -0.71
CCBE1-201ENST00000398179 C4AP0C0L4 1744 aa10.62□□□□□ -0.71
CCBE1-201ENST00000398179 C4BP0C0L5 1744 aa10.62□□□□□ -0.71
CCBE1-201ENST00000398179 EGR2P11161 476 aaPredicted RBP10.62□□□□□ -0.71
CCBE1-201ENST00000398179 SLC25A1P53007 311 aa10.62□□□□□ -0.71
CCBE1-201ENST00000398179 FOXF1Q12946 379 aa10.62□□□□□ -0.71
CCBE1-201ENST00000398179 A6NED7 52 aa10.62□□□□□ -0.71
CCBE1-201ENST00000398179 FKBP2P26885 142 aaKnown RBP10.62□□□□□ -0.71
CCBE1-201ENST00000398179 GZMMP51124 257 aa10.62□□□□□ -0.71
CCBE1-201ENST00000398179 ZNF260Q3ZCT1 412 aa10.62□□□□□ -0.71
CCBE1-201ENST00000398179 CFHR4Q92496 578 aa10.62□□□□□ -0.71
CCBE1-201ENST00000398179 MRPS18BQ9Y676 258 aaKnown RBP10.62□□□□□ -0.71
CCBE1-201ENST00000398179 EPPINO95925 133 aa10.62□□□□□ -0.71
CCBE1-201ENST00000398179 NOVP48745 357 aa10.62□□□□□ -0.71
CCBE1-201ENST00000398179 FOXE3Q13461 319 aa10.62□□□□□ -0.71
CCBE1-201ENST00000398179 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.62□□□□□ -0.71
CCBE1-201ENST00000398179 SARAFQ96BY9 339 aa10.62□□□□□ -0.71
CCBE1-201ENST00000398179 ALS2Q96Q42 1657 aa10.62□□□□□ -0.71
CCBE1-201ENST00000398179 DEFB127Q9H1M4 99 aa10.62□□□□□ -0.71
CCBE1-201ENST00000398179 LOXHD1Q8IVV2 1947 aa10.62□□□□□ -0.71
CCBE1-201ENST00000398179 MRPS18AQ9NVS2 196 aaKnown RBP10.61□□□□□ -0.71
CCBE1-201ENST00000398179 NBR2O15453 112 aa10.61□□□□□ -0.71
CCBE1-201ENST00000398179 PROP1O75360 226 aa10.61□□□□□ -0.71
CCBE1-201ENST00000398179 LOXL1Q08397 574 aaPredicted RBP10.61□□□□□ -0.71
CCBE1-201ENST00000398179 SRXN1Q9BYN0 137 aa10.61□□□□□ -0.71
CCBE1-201ENST00000398179 A0A0A6YYD5 115 aa10.61□□□□□ -0.71
CCBE1-201ENST00000398179 LGALS9BQ3B8N2 356 aa10.61□□□□□ -0.71
CCBE1-201ENST00000398179 LGALS9CQ6DKI2 356 aa10.61□□□□□ -0.71
CCBE1-201ENST00000398179 APRG1Q8IVJ8 170 aa10.61□□□□□ -0.71
CCBE1-201ENST00000398179 FAM110DQ8TAY7 271 aaPredicted RBP10.61□□□□□ -0.71
CCBE1-201ENST00000398179 ZNF708P17019 499 aa10.61□□□□□ -0.71
CCBE1-201ENST00000398179 NBL1P41271 181 aa10.61□□□□□ -0.71
CCBE1-201ENST00000398179 CCL20P78556 96 aa10.61□□□□□ -0.71
CCBE1-201ENST00000398179 PKD1L3Q7Z443 1732 aa10.61□□□□□ -0.71
CCBE1-201ENST00000398179 IGHV3-13P01766 116 aa10.61□□□□□ -0.71
CCBE1-201ENST00000398179 ZIC1Q15915 447 aa10.61□□□□□ -0.71
CCBE1-201ENST00000398179 SPSB3Q6PJ21 355 aa10.61□□□□□ -0.71
CCBE1-201ENST00000398179 RPP25Q9BUL9 199 aaKnown RBP10.61□□□□□ -0.71
CCBE1-201ENST00000398179 C4orf26Q17RF5 130 aa10.6□□□□□ -0.71
CCBE1-201ENST00000398179 FAM78AQ5JUQ0 283 aa10.6□□□□□ -0.71
CCBE1-201ENST00000398179 SMKR1H3BMG3 65 aa10.6□□□□□ -0.71
CCBE1-201ENST00000398179 Q6ZS49 121 aa10.6□□□□□ -0.71
CCBE1-201ENST00000398179 TRPT1Q86TN4 253 aaKnown RBP10.6□□□□□ -0.71
CCBE1-201ENST00000398179 DLL1O00548 723 aa10.6□□□□□ -0.71
CCBE1-201ENST00000398179 CELA2AP08217 269 aa10.6□□□□□ -0.71
CCBE1-201ENST00000398179 TMEM229AB2RXF0 380 aa10.6□□□□□ -0.71
CCBE1-201ENST00000398179 AMTNQ6UX39 209 aa10.6□□□□□ -0.71
CCBE1-201ENST00000398179 PATE1Q8WXA2 126 aa10.6□□□□□ -0.71
CCBE1-201ENST00000398179 USP54Q70EL1 1684 aa10.6□□□□□ -0.71
CCBE1-201ENST00000398179 FAM90A7PA6NKC0 464 aa10.59□□□□□ -0.71
CCBE1-201ENST00000398179 FAM90A22PA8MWA6 464 aa10.59□□□□□ -0.71
CCBE1-201ENST00000398179 FAM90A12PA8MX19 464 aa10.59□□□□□ -0.71
CCBE1-201ENST00000398179 FAM90A23PA8MXZ1 464 aa10.59□□□□□ -0.71
CCBE1-201ENST00000398179 GNB2P62879 340 aa10.59□□□□□ -0.71
CCBE1-201ENST00000398179 TMEM91Q6ZNR0 172 aa10.59□□□□□ -0.71
CCBE1-201ENST00000398179 SLC25A45Q8N413 288 aa10.59□□□□□ -0.71
CCBE1-201ENST00000398179 PRR15LQ9BU68 103 aa10.59□□□□□ -0.71
CCBE1-201ENST00000398179 SLC25A28Q96A46 364 aa10.59□□□□□ -0.71
CCBE1-201ENST00000398179 KLK13Q9UKR3 277 aa10.59□□□□□ -0.71
CCBE1-201ENST00000398179 MP68P56378 58 aa10.59□□□□□ -0.71
CCBE1-201ENST00000398179 GATA1P15976 413 aaPredicted RBP10.59□□□□□ -0.71
CCBE1-201ENST00000398179 RPS19BP1Q86WX3 136 aaKnown RBP10.59□□□□□ -0.71
CCBE1-201ENST00000398179 C20orf78Q9BR46 151 aa10.59□□□□□ -0.71
CCBE1-201ENST00000398179 FGF22Q9HCT0 170 aa10.59□□□□□ -0.71
CCBE1-201ENST00000398179 HAMPP81172 84 aa10.59□□□□□ -0.71
CCBE1-201ENST00000398179 HIGD1CA8MV81 97 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms