RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 SYS1-DBNDD2H3BUS1 97 aa13.01□□□□□ -0.33
CHMP1A-201ENST00000397901 SEC11AP67812 179 aa13.01□□□□□ -0.33
CHMP1A-201ENST00000397901 PRR20EP86478 221 aa13.01□□□□□ -0.33
CHMP1A-201ENST00000397901 PRR20CP86479 221 aa13.01□□□□□ -0.33
CHMP1A-201ENST00000397901 PRR20DP86480 221 aa13.01□□□□□ -0.33
CHMP1A-201ENST00000397901 PRR20BP86481 221 aa13.01□□□□□ -0.33
CHMP1A-201ENST00000397901 PRR20AP86496 221 aa13.01□□□□□ -0.33
CHMP1A-201ENST00000397901 GUSBP1Q15486 140 aa13.01□□□□□ -0.33
CHMP1A-201ENST00000397901 MS4A6AQ9H2W1 248 aa13.01□□□□□ -0.33
CHMP1A-201ENST00000397901 TNCP24821 2201 aa13.01□□□□□ -0.33
CHMP1A-201ENST00000397901 GPR183P32249 361 aa13.01□□□□□ -0.33
CHMP1A-201ENST00000397901 MBNL2Q5VZF2 373 aaKnown RBP13.01□□□□□ -0.33
CHMP1A-201ENST00000397901 FDCSPQ8NFU4 85 aa13.01□□□□□ -0.33
CHMP1A-201ENST00000397901 AP1S3Q96PC3 154 aa13.01□□□□□ -0.33
CHMP1A-201ENST00000397901 NABP2Q9BQ15 211 aa13.01□□□□□ -0.33
CHMP1A-201ENST00000397901 GCM1Q9NP62 436 aa13.01□□□□□ -0.33
CHMP1A-201ENST00000397901 TMEM14BQ9NUH8 114 aa13.01□□□□□ -0.33
CHMP1A-201ENST00000397901 SMPXQ9UHP9 88 aa13.01□□□□□ -0.33
CHMP1A-201ENST00000397901 INTS1Q8N201 2190 aaKnown RBP13.01□□□□□ -0.33
CHMP1A-201ENST00000397901 ICE1Q9Y2F5 2266 aa13.01□□□□□ -0.33
CHMP1A-201ENST00000397901 EP300Q09472 2414 aaPredicted RBP13.01□□□□□ -0.33
CHMP1A-201ENST00000397901 A0A087X0K7 114 aa13□□□□□ -0.33
CHMP1A-201ENST00000397901 WT1P19544 449 aaPredicted RBP13□□□□□ -0.33
CHMP1A-201ENST00000397901 CCL11P51671 97 aa13□□□□□ -0.33
CHMP1A-201ENST00000397901 DUX4L9Q6RFH8 374 aaPredicted RBP13□□□□□ -0.33
CHMP1A-201ENST00000397901 OR2V2Q96R30 315 aa13□□□□□ -0.33
CHMP1A-201ENST00000397901 FOXA2Q9Y261 457 aaPredicted RBP13□□□□□ -0.33
CHMP1A-201ENST00000397901 OR2J3O76001 311 aa13□□□□□ -0.33
CHMP1A-201ENST00000397901 IGHG3P01860 377 aa13□□□□□ -0.33
CHMP1A-201ENST00000397901 RPL8P62917 257 aaKnown RBP13□□□□□ -0.33
CHMP1A-201ENST00000397901 FAM120AOSQ5T036 256 aa13□□□□□ -0.33
CHMP1A-201ENST00000397901 IGFL2Q6UWQ7 119 aa13□□□□□ -0.33
CHMP1A-201ENST00000397901 FNDC4Q9H6D8 234 aaPredicted RBP13□□□□□ -0.33
CHMP1A-201ENST00000397901 ZNF835Q9Y2P0 537 aa13□□□□□ -0.33
CHMP1A-201ENST00000397901 A0A1B0GV72 72 aa12.99□□□□□ -0.33
CHMP1A-201ENST00000397901 GNG7O60262 68 aa12.99□□□□□ -0.33
CHMP1A-201ENST00000397901 C17orf58Q2M2W7 97 aa12.99□□□□□ -0.33
CHMP1A-201ENST00000397901 ASPHD1Q5U4P2 390 aa12.99□□□□□ -0.33
CHMP1A-201ENST00000397901 ZNF841Q6ZN19 808 aa12.99□□□□□ -0.33
CHMP1A-201ENST00000397901 CFAP47Q6ZTR5 3102 aa12.99□□□□□ -0.33
CHMP1A-201ENST00000397901 IGLV1-44P01699 117 aa12.99□□□□□ -0.33
CHMP1A-201ENST00000397901 SMIM17P0DL12 118 aa12.99□□□□□ -0.33
CHMP1A-201ENST00000397901 PPIAL4GP0DN37 164 aa12.99□□□□□ -0.33
CHMP1A-201ENST00000397901 MZT1Q08AG7 82 aa12.99□□□□□ -0.33
CHMP1A-201ENST00000397901 PSG3Q16557 428 aa12.99□□□□□ -0.33
CHMP1A-201ENST00000397901 CR1LQ2VPA4 569 aa12.99□□□□□ -0.33
CHMP1A-201ENST00000397901 C1orf162Q8NEQ5 155 aaPredicted RBP12.99□□□□□ -0.33
CHMP1A-201ENST00000397901 ZNF503Q96F45 646 aa12.99□□□□□ -0.33
CHMP1A-201ENST00000397901 ZC2HC1AQ96GY0 325 aa12.99□□□□□ -0.33
CHMP1A-201ENST00000397901 PMCHL2Q9BQD1 86 aa12.99□□□□□ -0.33
CHMP1A-201ENST00000397901 IGKV1OR2-108A0A075B7D4 117 aa12.98□□□□□ -0.33
CHMP1A-201ENST00000397901 C9orf118A6NHY6 69 aa12.98□□□□□ -0.33
CHMP1A-201ENST00000397901 K7EP34 96 aa12.98□□□□□ -0.33
CHMP1A-201ENST00000397901 SPRY3O43610 288 aa12.98□□□□□ -0.33
CHMP1A-201ENST00000397901 IGLV2-8P01709 118 aa12.98□□□□□ -0.33
CHMP1A-201ENST00000397901 MGST1P10620 155 aaKnown RBP12.98□□□□□ -0.33
CHMP1A-201ENST00000397901 S100A7AQ86SG5 101 aa12.98□□□□□ -0.33
CHMP1A-201ENST00000397901 PLEKHA3Q9HB20 300 aa12.98□□□□□ -0.33
CHMP1A-201ENST00000397901 GGTLC3B5MD39 225 aa12.98□□□□□ -0.33
CHMP1A-201ENST00000397901 MFAP2P55001 183 aa12.98□□□□□ -0.33
CHMP1A-201ENST00000397901 MLANAQ16655 118 aa12.98□□□□□ -0.33
CHMP1A-201ENST00000397901 TMEM167BQ9NRX6 74 aa12.98□□□□□ -0.33
CHMP1A-201ENST00000397901 NHLRC2Q8NBF2 726 aa12.97□□□□□ -0.33
CHMP1A-201ENST00000397901 ZNRD1Q9P1U0 126 aa12.97□□□□□ -0.33
CHMP1A-201ENST00000397901 SLC25A10Q9UBX3 287 aaPredicted RBP12.97□□□□□ -0.33
CHMP1A-201ENST00000397901 H3BRM9 83 aa12.97□□□□□ -0.33
CHMP1A-201ENST00000397901 GOSR1O95249 250 aa12.97□□□□□ -0.33
CHMP1A-201ENST00000397901 HTR1DP28221 377 aa12.97□□□□□ -0.33
CHMP1A-201ENST00000397901 GDF5OSQ5U4N7 250 aa12.97□□□□□ -0.33
CHMP1A-201ENST00000397901 DEFB108BQ8NET1 73 aa12.97□□□□□ -0.33
CHMP1A-201ENST00000397901 URB1-AS1Q96HZ7 61 aa12.97□□□□□ -0.33
CHMP1A-201ENST00000397901 CACNA1GO43497 2377 aa12.96□□□□□ -0.33
CHMP1A-201ENST00000397901 DSCAMO60469 2012 aa12.96□□□□□ -0.33
CHMP1A-201ENST00000397901 PPIAL4DF5H284 164 aa12.96□□□□□ -0.33
CHMP1A-201ENST00000397901 CA1P00915 261 aaPredicted RBP12.96□□□□□ -0.33
CHMP1A-201ENST00000397901 PPOXP50336 477 aa12.96□□□□□ -0.33
CHMP1A-201ENST00000397901 Q5PR19 223 aa12.96□□□□□ -0.33
CHMP1A-201ENST00000397901 IGF2-ASQ6U949 168 aa12.96□□□□□ -0.33
CHMP1A-201ENST00000397901 BHLHA15Q7RTS1 189 aaPredicted RBP12.96□□□□□ -0.33
CHMP1A-201ENST00000397901 ITLN1Q8WWA0 313 aa12.96□□□□□ -0.33
CHMP1A-201ENST00000397901 KBTBD11-OT1A0A1B0GTJ5 212 aa12.96□□□□□ -0.34
CHMP1A-201ENST00000397901 LEPROTL1O95214 131 aa12.96□□□□□ -0.34
CHMP1A-201ENST00000397901 IGKV1-16P04430 117 aa12.96□□□□□ -0.34
CHMP1A-201ENST00000397901 CGB3P0DN86 165 aa12.96□□□□□ -0.34
CHMP1A-201ENST00000397901 CGB7P0DN87 165 aa12.96□□□□□ -0.34
CHMP1A-201ENST00000397901 CEACAM3P40198 252 aa12.96□□□□□ -0.34
CHMP1A-201ENST00000397901 TMEM97Q5BJF2 176 aa12.96□□□□□ -0.34
CHMP1A-201ENST00000397901 OR9G1Q8NH87 305 aa12.96□□□□□ -0.34
CHMP1A-201ENST00000397901 CHCHD1Q96BP2 118 aaKnown RBP12.96□□□□□ -0.34
CHMP1A-201ENST00000397901 IGF2BP2-AS1Q96M15 143 aa12.96□□□□□ -0.34
CHMP1A-201ENST00000397901 PRR33A8MZF0 331 aa12.95□□□□□ -0.34
CHMP1A-201ENST00000397901 BPIFA4PQ86YQ2 179 aa12.95□□□□□ -0.34
CHMP1A-201ENST00000397901 ZNF71Q9NQZ8 489 aaPredicted RBP12.95□□□□□ -0.34
CHMP1A-201ENST00000397901 ZNF292O60281 2723 aa12.95□□□□□ -0.34
CHMP1A-201ENST00000397901 A6NDN8 102 aa12.95□□□□□ -0.34
CHMP1A-201ENST00000397901 SRRM4A7MD48 611 aaKnown RBP12.95□□□□□ -0.34
CHMP1A-201ENST00000397901 M0R1B8 84 aa12.95□□□□□ -0.34
CHMP1A-201ENST00000397901 TMEM108Q6UXF1 575 aa12.95□□□□□ -0.34
CHMP1A-201ENST00000397901 C2orf91Q6ZV80 131 aa12.95□□□□□ -0.34
CHMP1A-201ENST00000397901 OR5A1Q8NGJ0 315 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms