RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 TIMD4Q96H15 378 aa8.45□□□□□ -1.06
CPSF1P1-201ENST00000397477 BET1LQ9NYM9 111 aa8.45□□□□□ -1.06
CPSF1P1-201ENST00000397477 LRBAP50851 2863 aa8.45□□□□□ -1.06
CPSF1P1-201ENST00000397477 TET2Q6N021 2002 aaPredicted RBP8.45□□□□□ -1.06
CPSF1P1-201ENST00000397477 COL27A1Q8IZC6 1860 aaPredicted RBP8.44□□□□□ -1.06
CPSF1P1-201ENST00000397477 A0A1W2PPI3 338 aa8.44□□□□□ -1.06
CPSF1P1-201ENST00000397477 ZNF253O75346 499 aa8.44□□□□□ -1.06
CPSF1P1-201ENST00000397477 HIST1H1BP16401 226 aaKnown RBP8.44□□□□□ -1.06
CPSF1P1-201ENST00000397477 CDKN1AP38936 164 aa8.44□□□□□ -1.06
CPSF1P1-201ENST00000397477 ZNF137PP52743 207 aa8.44□□□□□ -1.06
CPSF1P1-201ENST00000397477 MFAP2P55001 183 aa8.44□□□□□ -1.06
CPSF1P1-201ENST00000397477 OR8B3Q8NGG8 313 aa8.44□□□□□ -1.06
CPSF1P1-201ENST00000397477 BTF3L4Q96K17 158 aa8.44□□□□□ -1.06
CPSF1P1-201ENST00000397477 TMEM68Q96MH6 324 aa8.44□□□□□ -1.06
CPSF1P1-201ENST00000397477 OR8B2Q96RD0 313 aa8.44□□□□□ -1.06
CPSF1P1-201ENST00000397477 MRPL36Q9P0J6 103 aaKnown RBP8.44□□□□□ -1.06
CPSF1P1-201ENST00000397477 CBY1Q9Y3M2 126 aa8.44□□□□□ -1.06
CPSF1P1-201ENST00000397477 LSM4Q9Y4Z0 139 aaKnown RBP8.44□□□□□ -1.06
CPSF1P1-201ENST00000397477 HIVEP3Q5T1R4 2406 aa8.44□□□□□ -1.06
CPSF1P1-201ENST00000397477 B9A039 149 aa8.44□□□□□ -1.06
CPSF1P1-201ENST00000397477 K7EN84 100 aa8.44□□□□□ -1.06
CPSF1P1-201ENST00000397477 TEX36Q5VZQ5 186 aa8.44□□□□□ -1.06
CPSF1P1-201ENST00000397477 HSPB9Q9BQS6 159 aa8.44□□□□□ -1.06
CPSF1P1-201ENST00000397477 GGTLC3B5MD39 225 aa8.44□□□□□ -1.06
CPSF1P1-201ENST00000397477 OR1L4Q8NGR5 311 aa8.44□□□□□ -1.06
CPSF1P1-201ENST00000397477 VN1R17PQ8TDU5 208 aa8.44□□□□□ -1.06
CPSF1P1-201ENST00000397477 RAB1CQ92928 201 aa8.44□□□□□ -1.06
CPSF1P1-201ENST00000397477 CLEC7AQ9BXN2 247 aa8.44□□□□□ -1.06
CPSF1P1-201ENST00000397477 PAM16Q9Y3D7 125 aa8.44□□□□□ -1.06
CPSF1P1-201ENST00000397477 IGHV2-26A0A0B4J1V2 119 aa8.43□□□□□ -1.06
CPSF1P1-201ENST00000397477 SHISA9B4DS77 424 aa8.43□□□□□ -1.06
CPSF1P1-201ENST00000397477 MC5RP33032 325 aa8.43□□□□□ -1.06
CPSF1P1-201ENST00000397477 AMTP48728 403 aa8.43□□□□□ -1.06
CPSF1P1-201ENST00000397477 TDGF1P3P51864 188 aa8.43□□□□□ -1.06
CPSF1P1-201ENST00000397477 ZNF672Q499Z4 452 aaPredicted RBP8.43□□□□□ -1.06
CPSF1P1-201ENST00000397477 C2orf83Q53S99 150 aa8.43□□□□□ -1.06
CPSF1P1-201ENST00000397477 OR2D3Q8NGH3 330 aa8.43□□□□□ -1.06
CPSF1P1-201ENST00000397477 C1orf159Q96HA4 380 aa8.43□□□□□ -1.06
CPSF1P1-201ENST00000397477 GPR6P46095 362 aaPredicted RBP8.43□□□□□ -1.06
CPSF1P1-201ENST00000397477 SIGLECL1Q8N7X8 197 aa8.43□□□□□ -1.06
CPSF1P1-201ENST00000397477 IL36BQ9NZH7 164 aa8.43□□□□□ -1.06
CPSF1P1-201ENST00000397477 ZNF257Q9Y2Q1 563 aa8.43□□□□□ -1.06
CPSF1P1-201ENST00000397477 COL12A1Q99715 3063 aa8.43□□□□□ -1.06
CPSF1P1-201ENST00000397477 TMEM11P17152 192 aa8.43□□□□□ -1.06
CPSF1P1-201ENST00000397477 C14orf144Q96I85 54 aa8.43□□□□□ -1.06
CPSF1P1-201ENST00000397477 TBX15Q96SF7 602 aa8.43□□□□□ -1.06
CPSF1P1-201ENST00000397477 SSBP4Q9BWG4 385 aaPredicted RBP8.43□□□□□ -1.06
CPSF1P1-201ENST00000397477 UBTD1Q9HAC8 227 aa8.43□□□□□ -1.06
CPSF1P1-201ENST00000397477 NDUFA4L2Q9NRX3 87 aa8.43□□□□□ -1.06
CPSF1P1-201ENST00000397477 NUPR1O60356 82 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 GGCTO75223 188 aaKnown RBP8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 HYPMO75409 117 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 DDTP30046 118 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 MAS1LP35410 378 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 SP5Q6BEB4 398 aaPredicted RBP8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 UNQ6494/PRO21346Q6UXR6 183 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 ZNF833PQ6ZTB9 187 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 OR5AN1Q8NGI8 311 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 RAB1BQ9H0U4 201 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 IGHV3OR16-10A0A075B7F0 116 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 TIMM23O14925 209 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 SERF1AO75920 110 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 SRIP30626 198 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 PRR20EP86478 221 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 PRR20CP86479 221 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 PRR20DP86480 221 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 PRR20BP86481 221 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 PRR20AP86496 221 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 PAX5Q02548 391 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 CR1LQ2VPA4 569 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 FAM19A2Q8N3H0 131 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 RASL11BQ9BPW5 248 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 TMSB15BA0A087X1C1 80 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 PRSS46E5RG02 174 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 F2Z2F3 143 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 K7ENP7 123 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 ACTL10Q5JWF8 245 aa8.42□□□□□ -1.06
CPSF1P1-201ENST00000397477 NOTCH2Q04721 2471 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 TRAV8-1A0A0A6YYK1 113 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 ISLRO14498 428 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 TAS2R60P59551 318 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 Q56UQ5 140 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 PRNTQ86SH4 94 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 PPP1R27Q86WC6 154 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 ST6GALNAC3Q8NDV1 305 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 TMEM167AQ8TBQ9 72 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 VKORC1Q9BQB6 163 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 TXNDC17Q9BRA2 123 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 NOTCH3Q9UM47 2321 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 NDUFS7O75251 213 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 FCN3O75636 299 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 TMPRSS3P57727 454 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 TPPP2P59282 170 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 PKIAP61925 76 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 LCN2P80188 198 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 IQCJQ1A5X6 159 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 TMEM155Q4W5P6 130 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 ATOH7Q8N100 152 aa8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 SRSF12Q8WXF0 261 aaKnown RBP8.41□□□□□ -1.06
CPSF1P1-201ENST00000397477 PERPQ96FX8 193 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms