RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 CXorf58Q96LI9 332 aa13.14□□□□□ -0.31
TSPAN4-205ENST00000397406 CLN5O75503 358 aa13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 IGHV3-23P01764 117 aa13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 FCGR2BP31994 310 aaPredicted RBP13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 ATP5G2Q06055 141 aa13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 LCNL1Q6ZST4 164 aa13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 RNF152Q8N8N0 203 aa13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 WIPF2Q8TF74 440 aaPredicted RBP13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 GNPNAT1Q96EK6 184 aaPredicted RBP13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 PSMG3Q9BT73 122 aaPredicted RBP13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 GGTLC1Q9BX51 225 aa13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 SLC25A32Q9H2D1 315 aa13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 TIMM9Q9Y5J7 89 aa13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 PKD1L1Q8TDX9 2849 aa13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 AGPAT2O15120 278 aa13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 ELANEP08246 267 aa13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 SEC11BP0C7V7 166 aa13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 IGLC1P0CG04 106 aa13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 KRTAP10-3P60369 221 aa13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 KIAA0141Q14154 515 aaPredicted RBP13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 ALKAL2Q6UX46 152 aa13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 KLHDC1Q8N7A1 406 aa13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 ZNF680Q8NEM1 530 aa13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 MYOZ3Q8TDC0 251 aa13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 TMED6Q8WW62 240 aa13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 EEF1AKMT3Q96AZ1 226 aa13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 USMG5Q96IX5 58 aa13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 CCDC140Q96MF4 163 aa13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 TXN2Q99757 166 aa13.13□□□□□ -0.31
TSPAN4-205ENST00000397406 MGAM2Q2M2H8 2515 aa13.12□□□□□ -0.31
TSPAN4-205ENST00000397406 TRBV7-1A0A0A6YYK4 115 aa13.12□□□□□ -0.31
TSPAN4-205ENST00000397406 OR10J1P30954 320 aa13.12□□□□□ -0.31
TSPAN4-205ENST00000397406 NPBWR1P48145 328 aa13.12□□□□□ -0.31
TSPAN4-205ENST00000397406 CAMLGP49069 296 aa13.12□□□□□ -0.31
TSPAN4-205ENST00000397406 PRR31Q5SQ13 230 aa13.12□□□□□ -0.31
TSPAN4-205ENST00000397406 COMMD1Q8N668 190 aa13.12□□□□□ -0.31
TSPAN4-205ENST00000397406 TRGV9Q99603 122 aa13.12□□□□□ -0.31
TSPAN4-205ENST00000397406 PLA2G2EQ9NZK7 142 aa13.12□□□□□ -0.31
TSPAN4-205ENST00000397406 SLC45A2Q9UMX9 530 aa13.12□□□□□ -0.31
TSPAN4-205ENST00000397406 MEGF8Q7Z7M0 2845 aa13.12□□□□□ -0.31
TSPAN4-205ENST00000397406 TCRBV4S1A1TA0A5B7 111 aa13.11□□□□□ -0.31
TSPAN4-205ENST00000397406 ZFP92A6NM28 416 aa13.11□□□□□ -0.31
TSPAN4-205ENST00000397406 C17orf112F2Z3M2 114 aa13.11□□□□□ -0.31
TSPAN4-205ENST00000397406 RPLP1P05386 114 aaKnown RBP13.11□□□□□ -0.31
TSPAN4-205ENST00000397406 RAB31Q13636 194 aa13.11□□□□□ -0.31
TSPAN4-205ENST00000397406 Q56UQ5 140 aa13.11□□□□□ -0.31
TSPAN4-205ENST00000397406 EIF5AL1Q6IS14 154 aaKnown RBP13.11□□□□□ -0.31
TSPAN4-205ENST00000397406 SHISA2Q6UWI4 295 aa13.11□□□□□ -0.31
TSPAN4-205ENST00000397406 TMEM182Q6ZP80 229 aaPredicted RBP13.11□□□□□ -0.31
TSPAN4-205ENST00000397406 CYP2G1PQ6ZSU1 146 aa13.11□□□□□ -0.31
TSPAN4-205ENST00000397406 OR4F5Q8NH21 305 aa13.11□□□□□ -0.31
TSPAN4-205ENST00000397406 ATP6V0BQ99437 205 aa13.11□□□□□ -0.31
TSPAN4-205ENST00000397406 A0A0G2JLM5 398 aa13.1□□□□□ -0.31
TSPAN4-205ENST00000397406 GNG7O60262 68 aa13.1□□□□□ -0.31
TSPAN4-205ENST00000397406 IGKV1-17P01599 117 aa13.1□□□□□ -0.31
TSPAN4-205ENST00000397406 LINC00869P0C866 280 aa13.1□□□□□ -0.31
TSPAN4-205ENST00000397406 RPL29P47914 159 aaKnown RBP13.1□□□□□ -0.31
TSPAN4-205ENST00000397406 PRR20EP86478 221 aa13.1□□□□□ -0.31
TSPAN4-205ENST00000397406 PRR20CP86479 221 aa13.1□□□□□ -0.31
TSPAN4-205ENST00000397406 PRR20DP86480 221 aa13.1□□□□□ -0.31
TSPAN4-205ENST00000397406 PRR20BP86481 221 aa13.1□□□□□ -0.31
TSPAN4-205ENST00000397406 PRR20AP86496 221 aa13.1□□□□□ -0.31
TSPAN4-205ENST00000397406 ZNF90Q03938 601 aa13.1□□□□□ -0.31
TSPAN4-205ENST00000397406 ZNF709Q8N972 641 aa13.1□□□□□ -0.31
TSPAN4-205ENST00000397406 OR5AU1Q8NGC0 362 aa13.1□□□□□ -0.31
TSPAN4-205ENST00000397406 OR2G3Q8NGZ4 309 aa13.1□□□□□ -0.31
TSPAN4-205ENST00000397406 PXMP4Q9Y6I8 212 aa13.1□□□□□ -0.31
TSPAN4-205ENST00000397406 TRAV30A0A087WSZ9 112 aa13.09□□□□□ -0.31
TSPAN4-205ENST00000397406 OR2T8A6NH00 312 aa13.09□□□□□ -0.31
TSPAN4-205ENST00000397406 IFNA7P01567 189 aa13.09□□□□□ -0.31
TSPAN4-205ENST00000397406 SERF2P84101 59 aa13.09□□□□□ -0.31
TSPAN4-205ENST00000397406 TIGITQ495A1 244 aa13.09□□□□□ -0.31
TSPAN4-205ENST00000397406 TCTEX1D4Q5JR98 221 aa13.09□□□□□ -0.31
TSPAN4-205ENST00000397406 FAM74A1Q5RGS3 127 aa13.09□□□□□ -0.31
TSPAN4-205ENST00000397406 MIC13Q5XKP0 118 aa13.09□□□□□ -0.31
TSPAN4-205ENST00000397406 ZNF343Q6P1L6 599 aa13.09□□□□□ -0.31
TSPAN4-205ENST00000397406 ZNF491Q8N8L2 437 aa13.09□□□□□ -0.31
TSPAN4-205ENST00000397406 KCNIP2Q9NS61 270 aa13.09□□□□□ -0.31
TSPAN4-205ENST00000397406 CMYA5Q8N3K9 4069 aa13.08□□□□□ -0.32
TSPAN4-205ENST00000397406 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.08□□□□□ -0.32
TSPAN4-205ENST00000397406 CLPSL1A2RUU4 121 aa13.08□□□□□ -0.32
TSPAN4-205ENST00000397406 RGS13O14921 159 aa13.08□□□□□ -0.32
TSPAN4-205ENST00000397406 IGHV3-11P01762 117 aa13.08□□□□□ -0.32
TSPAN4-205ENST00000397406 CTSGP08311 255 aa13.08□□□□□ -0.32
TSPAN4-205ENST00000397406 GATA2P23769 480 aaPredicted RBP13.08□□□□□ -0.32
TSPAN4-205ENST00000397406 GPR183P32249 361 aa13.08□□□□□ -0.32
TSPAN4-205ENST00000397406 ADMP35318 185 aa13.08□□□□□ -0.32
TSPAN4-205ENST00000397406 PROK1P58294 105 aa13.08□□□□□ -0.32
TSPAN4-205ENST00000397406 CLEC19AQ6UXS0 136 aa13.08□□□□□ -0.32
TSPAN4-205ENST00000397406 ZNF767PQ75MW2 155 aa13.08□□□□□ -0.32
TSPAN4-205ENST00000397406 STPG3Q8N7X2 389 aa13.08□□□□□ -0.32
TSPAN4-205ENST00000397406 BPIFCQ8NFQ6 507 aa13.08□□□□□ -0.32
TSPAN4-205ENST00000397406 WFDC12Q8WWY7 111 aa13.08□□□□□ -0.32
TSPAN4-205ENST00000397406 GAR1Q9NY12 217 aaKnown RBP13.08□□□□□ -0.32
TSPAN4-205ENST00000397406 UBQLN2Q9UHD9 624 aa13.08□□□□□ -0.32
TSPAN4-205ENST00000397406 RNF114Q9Y508 228 aa13.08□□□□□ -0.32
TSPAN4-205ENST00000397406 WIPF1O43516 503 aa13.07□□□□□ -0.32
TSPAN4-205ENST00000397406 YIF1AO95070 293 aa13.07□□□□□ -0.32
TSPAN4-205ENST00000397406 CLEC3BP05452 202 aa13.07□□□□□ -0.32
TSPAN4-205ENST00000397406 SULT1A2P50226 295 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms