RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 TAS2R20P59543 309 aa6.31□□□□□ -1.4
CAPN3-208ENST00000397204 C12orf74Q32Q52 190 aa6.31□□□□□ -1.4
CAPN3-208ENST00000397204 UBE2NLQ5JXB2 153 aa6.31□□□□□ -1.4
CAPN3-208ENST00000397204 STXBP6Q8NFX7 210 aa6.31□□□□□ -1.4
CAPN3-208ENST00000397204 DCANP1Q8TF63 244 aa6.31□□□□□ -1.4
CAPN3-208ENST00000397204 TMEM230Q96A57 120 aa6.31□□□□□ -1.4
CAPN3-208ENST00000397204 RAB40CQ96S21 281 aa6.31□□□□□ -1.4
CAPN3-208ENST00000397204 C1QTNF4Q9BXJ3 329 aa6.31□□□□□ -1.4
CAPN3-208ENST00000397204 AGRNO00468 2067 aa6.3□□□□□ -1.4
CAPN3-208ENST00000397204 TRAV30A0A087WSZ9 112 aa6.3□□□□□ -1.4
CAPN3-208ENST00000397204 A0A0B4J293 547 aa6.3□□□□□ -1.4
CAPN3-208ENST00000397204 HELTA6NFD8 242 aa6.3□□□□□ -1.4
CAPN3-208ENST00000397204 PRSS29PA6NIE9 313 aa6.3□□□□□ -1.4
CAPN3-208ENST00000397204 KNCNA6PVL3 124 aa6.3□□□□□ -1.4
CAPN3-208ENST00000397204 CLN5O75503 358 aa6.3□□□□□ -1.4
CAPN3-208ENST00000397204 ATG12O94817 140 aa6.3□□□□□ -1.4
CAPN3-208ENST00000397204 IFNA17P01571 189 aa6.3□□□□□ -1.4
CAPN3-208ENST00000397204 AMBPP02760 352 aa6.3□□□□□ -1.4
CAPN3-208ENST00000397204 P2RY1P47900 373 aa6.3□□□□□ -1.4
CAPN3-208ENST00000397204 NUTF2P61970 127 aaKnown RBP6.3□□□□□ -1.4
CAPN3-208ENST00000397204 LGALS9BQ3B8N2 356 aa6.3□□□□□ -1.4
CAPN3-208ENST00000397204 ACTL10Q5JWF8 245 aa6.3□□□□□ -1.4
CAPN3-208ENST00000397204 SLC35G3Q8N808 338 aa6.3□□□□□ -1.4
CAPN3-208ENST00000397204 SAMD12Q8N8I0 201 aa6.3□□□□□ -1.4
CAPN3-208ENST00000397204 OR4X1Q8NH49 305 aa6.3□□□□□ -1.4
CAPN3-208ENST00000397204 GPX8Q8TED1 209 aa6.3□□□□□ -1.4
CAPN3-208ENST00000397204 MRGPRFQ96AM1 343 aa6.3□□□□□ -1.4
CAPN3-208ENST00000397204 NDUFAF3Q9BU61 184 aa6.3□□□□□ -1.4
CAPN3-208ENST00000397204 Q9H521 79 aa6.3□□□□□ -1.4
CAPN3-208ENST00000397204 SEPSECSQ9HD40 501 aaKnown RBP6.3□□□□□ -1.4
CAPN3-208ENST00000397204 ABCA13Q86UQ4 5058 aa6.3□□□□□ -1.4
CAPN3-208ENST00000397204 SMIM31A0A1B0GVY4 71 aa6.29□□□□□ -1.4
CAPN3-208ENST00000397204 RTL8CO15255 209 aa6.29□□□□□ -1.4
CAPN3-208ENST00000397204 SCGB1D2O95969 90 aa6.29□□□□□ -1.4
CAPN3-208ENST00000397204 ZNF688P0C7X2 276 aa6.29□□□□□ -1.4
CAPN3-208ENST00000397204 RNASE2P10153 161 aaKnown RBP6.29□□□□□ -1.4
CAPN3-208ENST00000397204 C4BPBP20851 252 aa6.29□□□□□ -1.4
CAPN3-208ENST00000397204 RPS19P39019 145 aaKnown RBP6.29□□□□□ -1.4
CAPN3-208ENST00000397204 ETV6P41212 452 aa6.29□□□□□ -1.4
CAPN3-208ENST00000397204 PPP5CP53041 499 aa6.29□□□□□ -1.4
CAPN3-208ENST00000397204 RND3P61587 244 aa6.29□□□□□ -1.4
CAPN3-208ENST00000397204 DHRS2Q13268 280 aa6.29□□□□□ -1.4
CAPN3-208ENST00000397204 Q8WTZ3 238 aa6.29□□□□□ -1.4
CAPN3-208ENST00000397204 ZNF486Q96H40 463 aaPredicted RBP6.29□□□□□ -1.4
CAPN3-208ENST00000397204 FAM210BQ96KR6 192 aa6.29□□□□□ -1.4
CAPN3-208ENST00000397204 PDCD10Q9BUL8 212 aa6.29□□□□□ -1.4
CAPN3-208ENST00000397204 CDIP1Q9H305 208 aa6.29□□□□□ -1.4
CAPN3-208ENST00000397204 SCPEP1Q9HB40 452 aa6.29□□□□□ -1.4
CAPN3-208ENST00000397204 CLEC5AQ9NY25 188 aa6.29□□□□□ -1.4
CAPN3-208ENST00000397204 M0R2N4 97 aa6.28□□□□□ -1.4
CAPN3-208ENST00000397204 IFNA10P01566 189 aa6.28□□□□□ -1.4
CAPN3-208ENST00000397204 IFNA21P01568 189 aa6.28□□□□□ -1.4
CAPN3-208ENST00000397204 IGKV1-17P01599 117 aa6.28□□□□□ -1.4
CAPN3-208ENST00000397204 IGKV1-5P01602 117 aa6.28□□□□□ -1.4
CAPN3-208ENST00000397204 P0C879 139 aa6.28□□□□□ -1.4
CAPN3-208ENST00000397204 OPRK1P41145 380 aa6.28□□□□□ -1.4
CAPN3-208ENST00000397204 SNRPD3P62318 126 aaKnown RBP6.28□□□□□ -1.4
CAPN3-208ENST00000397204 IZUMO4Q1ZYL8 232 aa6.28□□□□□ -1.4
CAPN3-208ENST00000397204 SPINK9Q5DT21 86 aa6.28□□□□□ -1.4
CAPN3-208ENST00000397204 NEU1Q99519 415 aa6.28□□□□□ -1.4
CAPN3-208ENST00000397204 FNDC4Q9H6D8 234 aaPredicted RBP6.28□□□□□ -1.4
CAPN3-208ENST00000397204 ENY2Q9NPA8 101 aa6.28□□□□□ -1.4
CAPN3-208ENST00000397204 MRPL36Q9P0J6 103 aaKnown RBP6.28□□□□□ -1.4
CAPN3-208ENST00000397204 PFDN2Q9UHV9 154 aa6.28□□□□□ -1.4
CAPN3-208ENST00000397204 CELA1Q9UNI1 258 aa6.28□□□□□ -1.4
CAPN3-208ENST00000397204 LINC00854A0A1B0GVQ3 168 aa6.27□□□□□ -1.41
CAPN3-208ENST00000397204 RPS10-NUDT3A0A1W2PQS6 291 aa6.27□□□□□ -1.41
CAPN3-208ENST00000397204 TMEM189A5PLL7 270 aa6.27□□□□□ -1.41
CAPN3-208ENST00000397204 SMIM9A6NGZ8 99 aa6.27□□□□□ -1.41
CAPN3-208ENST00000397204 H3BMM0 161 aa6.27□□□□□ -1.41
CAPN3-208ENST00000397204 APOA1P02647 267 aa6.27□□□□□ -1.41
CAPN3-208ENST00000397204 SPART-AS1P0CW21 52 aa6.27□□□□□ -1.41
CAPN3-208ENST00000397204 PGAM2P15259 253 aa6.27□□□□□ -1.41
CAPN3-208ENST00000397204 RCVRNP35243 200 aa6.27□□□□□ -1.41
CAPN3-208ENST00000397204 HTR2BP41595 481 aa6.27□□□□□ -1.41
CAPN3-208ENST00000397204 AKR1C2P52895 323 aa6.27□□□□□ -1.41
CAPN3-208ENST00000397204 YPEL3P61236 119 aaPredicted RBP6.27□□□□□ -1.41
CAPN3-208ENST00000397204 NEDD8Q15843 81 aa6.27□□□□□ -1.41
CAPN3-208ENST00000397204 BSXQ3C1V8 233 aa6.27□□□□□ -1.41
CAPN3-208ENST00000397204 TIGITQ495A1 244 aa6.27□□□□□ -1.41
CAPN3-208ENST00000397204 PSMG4Q5JS54 123 aa6.27□□□□□ -1.41
CAPN3-208ENST00000397204 SOHLH1Q5JUK2 328 aa6.27□□□□□ -1.41
CAPN3-208ENST00000397204 ZNF767PQ75MW2 155 aa6.27□□□□□ -1.41
CAPN3-208ENST00000397204 OR1S2Q8NGQ3 325 aa6.27□□□□□ -1.41
CAPN3-208ENST00000397204 GLMPQ8WWB7 406 aa6.27□□□□□ -1.41
CAPN3-208ENST00000397204 RRNAD1Q96FB5 475 aaKnown RBP6.27□□□□□ -1.41
CAPN3-208ENST00000397204 XCL2Q9UBD3 114 aa6.27□□□□□ -1.41
CAPN3-208ENST00000397204 C3orf85A0A1B0GTC6 90 aa6.26□□□□□ -1.41
CAPN3-208ENST00000397204 FAM90A26D6RGX4 464 aa6.26□□□□□ -1.41
CAPN3-208ENST00000397204 B3GALNT1O75752 331 aa6.26□□□□□ -1.41
CAPN3-208ENST00000397204 IGLC1P0CG04 106 aa6.26□□□□□ -1.41
CAPN3-208ENST00000397204 SLC25A4P12235 298 aa6.26□□□□□ -1.41
CAPN3-208ENST00000397204 HOXA1P49639 335 aaPredicted RBP6.26□□□□□ -1.41
CAPN3-208ENST00000397204 PIGPP57054 158 aa6.26□□□□□ -1.41
CAPN3-208ENST00000397204 SPCS3P61009 180 aa6.26□□□□□ -1.41
CAPN3-208ENST00000397204 RNF212Q495C1 297 aa6.26□□□□□ -1.41
CAPN3-208ENST00000397204 AARDQ4LEZ3 155 aa6.26□□□□□ -1.41
CAPN3-208ENST00000397204 MZT2AQ6P582 158 aa6.26□□□□□ -1.41
CAPN3-208ENST00000397204 Q6ZR54 194 aa6.26□□□□□ -1.41
CAPN3-208ENST00000397204 OR52E5Q8NH55 327 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms