RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 RELBQ01201 579 aa11.82□□□□□ -0.52
TM9SF1-202ENST00000396854 PIFOQ8TCI5 191 aa11.82□□□□□ -0.52
TM9SF1-202ENST00000396854 C22orf15Q8WYQ4 148 aa11.82□□□□□ -0.52
TM9SF1-202ENST00000396854 RITA1Q96K30 269 aa11.82□□□□□ -0.52
TM9SF1-202ENST00000396854 RHOVQ96L33 236 aa11.82□□□□□ -0.52
TM9SF1-202ENST00000396854 PFDN5Q99471 154 aa11.82□□□□□ -0.52
TM9SF1-202ENST00000396854 NAV3Q8IVL0 2385 aa11.82□□□□□ -0.52
TM9SF1-202ENST00000396854 MDFIC2A0A1B0GVS7 189 aa11.81□□□□□ -0.52
TM9SF1-202ENST00000396854 C11orf94C9JXX5 98 aa11.81□□□□□ -0.52
TM9SF1-202ENST00000396854 PDE6DO43924 150 aa11.81□□□□□ -0.52
TM9SF1-202ENST00000396854 IGLV2-23P01705 113 aa11.81□□□□□ -0.52
TM9SF1-202ENST00000396854 FAM106CPP0CH98 169 aa11.81□□□□□ -0.52
TM9SF1-202ENST00000396854 FABP4P15090 132 aa11.81□□□□□ -0.52
TM9SF1-202ENST00000396854 CD24P25063 80 aa11.81□□□□□ -0.52
TM9SF1-202ENST00000396854 VDAC2P45880 294 aaPredicted RBP11.81□□□□□ -0.52
TM9SF1-202ENST00000396854 FBLN7Q53RD9 439 aa11.81□□□□□ -0.52
TM9SF1-202ENST00000396854 TMEM183AQ8IXX5 376 aa11.81□□□□□ -0.52
TM9SF1-202ENST00000396854 NECAP1Q8NC96 275 aa11.81□□□□□ -0.52
TM9SF1-202ENST00000396854 OR4A16Q8NH70 328 aa11.81□□□□□ -0.52
TM9SF1-202ENST00000396854 ZNF48Q96MX3 618 aaPredicted RBP11.81□□□□□ -0.52
TM9SF1-202ENST00000396854 MXRA5Q9NR99 2828 aa11.81□□□□□ -0.52
TM9SF1-202ENST00000396854 PRSS46E5RG02 174 aa11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 PPP5D1E7EU14 171 aa11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 GGCTO75223 188 aaKnown RBP11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 IL6RP08887 468 aaPredicted RBP11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 NPPCP23582 126 aa11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 OPRK1P41145 380 aa11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 FAM3BP58499 235 aaPredicted RBP11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 HES1Q14469 280 aa11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 COA6Q5JTJ3 125 aaKnown RBP11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 SSX9Q7RTT3 188 aa11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 HIST1H2BLQ99880 126 aa11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 GSX1Q9H4S2 264 aaPredicted RBP11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 CDC42EP3Q9UKI2 254 aa11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 C15orf61A6NNL5 157 aa11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 GATCO43716 136 aaKnown RBP11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 TYMSP04818 313 aa11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 DEFA4P12838 97 aa11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 OR4A47Q6IF82 309 aa11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 Q6YL49 198 aa11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 VKORC1L1Q8N0U8 176 aa11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 NPBQ8NG41 125 aa11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 PACRGQ96M98 296 aaPredicted RBP11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 ELOVL1Q9BW60 279 aa11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 KCNIP2Q9NS61 270 aa11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 BET1LQ9NYM9 111 aa11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 FOXA2Q9Y261 457 aaPredicted RBP11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 SONP18583 2426 aaKnown RBP11.8□□□□□ -0.52
TM9SF1-202ENST00000396854 NDUFA3O95167 84 aa11.79□□□□□ -0.52
TM9SF1-202ENST00000396854 IFNA10P01566 189 aa11.79□□□□□ -0.52
TM9SF1-202ENST00000396854 SAA1P0DJI8 122 aaPredicted RBP11.79□□□□□ -0.52
TM9SF1-202ENST00000396854 TMEM11P17152 192 aa11.79□□□□□ -0.52
TM9SF1-202ENST00000396854 SCGB2A2Q13296 93 aa11.79□□□□□ -0.52
TM9SF1-202ENST00000396854 TMEM14BQ9NUH8 114 aa11.79□□□□□ -0.52
TM9SF1-202ENST00000396854 TCF19Q9Y242 345 aa11.79□□□□□ -0.52
TM9SF1-202ENST00000396854 F6UZH7 168 aa11.79□□□□□ -0.52
TM9SF1-202ENST00000396854 H3BUX3 64 aa11.79□□□□□ -0.52
TM9SF1-202ENST00000396854 CNTFRP26992 372 aa11.79□□□□□ -0.52
TM9SF1-202ENST00000396854 IER3P46695 156 aa11.79□□□□□ -0.52
TM9SF1-202ENST00000396854 VMA21Q3ZAQ7 101 aa11.79□□□□□ -0.52
TM9SF1-202ENST00000396854 GCSAMLQ5JQS6 135 aa11.79□□□□□ -0.52
TM9SF1-202ENST00000396854 TREML4Q6UXN2 200 aa11.79□□□□□ -0.52
TM9SF1-202ENST00000396854 OR1P1Q8NH06 330 aa11.79□□□□□ -0.52
TM9SF1-202ENST00000396854 VSTM2AQ8TAG5 236 aa11.79□□□□□ -0.52
TM9SF1-202ENST00000396854 TMEM170AQ8WVE7 144 aa11.79□□□□□ -0.52
TM9SF1-202ENST00000396854 TXNDC17Q9BRA2 123 aa11.79□□□□□ -0.52
TM9SF1-202ENST00000396854 HEYLQ9NQ87 328 aaPredicted RBP11.79□□□□□ -0.52
TM9SF1-202ENST00000396854 TNCP24821 2201 aa11.79□□□□□ -0.52
TM9SF1-202ENST00000396854 HIVEP2P31629 2446 aa11.78□□□□□ -0.52
TM9SF1-202ENST00000396854 TRAV3A0A0B4J244 114 aa11.78□□□□□ -0.52
TM9SF1-202ENST00000396854 A0A1W2PPV4 95 aa11.78□□□□□ -0.52
TM9SF1-202ENST00000396854 NBR2O15453 112 aa11.78□□□□□ -0.52
TM9SF1-202ENST00000396854 CRYGBP07316 175 aa11.78□□□□□ -0.52
TM9SF1-202ENST00000396854 GNB1P62873 340 aa11.78□□□□□ -0.52
TM9SF1-202ENST00000396854 PSG5Q15238 335 aa11.78□□□□□ -0.52
TM9SF1-202ENST00000396854 MMDQ15546 238 aa11.78□□□□□ -0.52
TM9SF1-202ENST00000396854 TEX45Q8NA69 505 aa11.78□□□□□ -0.52
TM9SF1-202ENST00000396854 OR4A5Q8NH83 315 aa11.78□□□□□ -0.52
TM9SF1-202ENST00000396854 OR5R1Q8NH85 324 aa11.78□□□□□ -0.52
TM9SF1-202ENST00000396854 RNASEH2CQ8TDP1 164 aaKnown RBP11.78□□□□□ -0.52
TM9SF1-202ENST00000396854 ACY3Q96HD9 319 aa11.78□□□□□ -0.52
TM9SF1-202ENST00000396854 ZMAT5Q9UDW3 170 aaKnown RBP11.78□□□□□ -0.52
TM9SF1-202ENST00000396854 A6NDX4 124 aa11.77□□□□□ -0.52
TM9SF1-202ENST00000396854 RRHO14718 337 aa11.77□□□□□ -0.52
TM9SF1-202ENST00000396854 ACTL10Q5JWF8 245 aa11.77□□□□□ -0.52
TM9SF1-202ENST00000396854 LINC01551Q86U37 167 aa11.77□□□□□ -0.52
TM9SF1-202ENST00000396854 RBM14Q96PK6 669 aaKnown RBP11.77□□□□□ -0.52
TM9SF1-202ENST00000396854 MGST2Q99735 147 aa11.77□□□□□ -0.52
TM9SF1-202ENST00000396854 GGTLC1Q9BX51 225 aa11.77□□□□□ -0.52
TM9SF1-202ENST00000396854 C1RLQ9NZP8 487 aa11.77□□□□□ -0.52
TM9SF1-202ENST00000396854 PRNDQ9UKY0 176 aa11.77□□□□□ -0.52
TM9SF1-202ENST00000396854 A0A1W2PPQ1 181 aa11.77□□□□□ -0.53
TM9SF1-202ENST00000396854 UPK2O00526 184 aa11.77□□□□□ -0.53
TM9SF1-202ENST00000396854 SLC25A17O43808 307 aa11.77□□□□□ -0.53
TM9SF1-202ENST00000396854 RD3LP0DJH9 198 aa11.77□□□□□ -0.53
TM9SF1-202ENST00000396854 SRD5A1P18405 259 aa11.77□□□□□ -0.53
TM9SF1-202ENST00000396854 ATP5G3P48201 142 aa11.77□□□□□ -0.53
TM9SF1-202ENST00000396854 C9orf152Q5JTZ5 239 aa11.77□□□□□ -0.53
TM9SF1-202ENST00000396854 KCNIP4Q6PIL6 250 aa11.77□□□□□ -0.53
TM9SF1-202ENST00000396854 TMEM167AQ8TBQ9 72 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms