RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 TNFRSF1AP19438 455 aa12.65□□□□□ -0.38
HOXA3-202ENST00000396352 TBR1Q16650 682 aa12.65□□□□□ -0.38
HOXA3-202ENST00000396352 MRGPRG-AS1Q2M3A8 158 aa12.65□□□□□ -0.38
HOXA3-202ENST00000396352 VSTM2AQ8TAG5 236 aa12.65□□□□□ -0.38
HOXA3-202ENST00000396352 ZNF596Q8TC21 504 aa12.65□□□□□ -0.38
HOXA3-202ENST00000396352 TPSG1Q9NRR2 321 aa12.65□□□□□ -0.38
HOXA3-202ENST00000396352 CUL9Q8IWT3 2517 aa12.65□□□□□ -0.38
HOXA3-202ENST00000396352 C17orf100A8MU93 164 aa12.64□□□□□ -0.39
HOXA3-202ENST00000396352 DLEU1O43261 78 aa12.64□□□□□ -0.39
HOXA3-202ENST00000396352 ADIPOQQ15848 244 aa12.64□□□□□ -0.39
HOXA3-202ENST00000396352 IGF2-ASQ6U949 168 aa12.64□□□□□ -0.39
HOXA3-202ENST00000396352 BSNQ9UPA5 3926 aa12.64□□□□□ -0.39
HOXA3-202ENST00000396352 KALRNO60229 2985 aa12.64□□□□□ -0.39
HOXA3-202ENST00000396352 MFAP2P55001 183 aa12.64□□□□□ -0.39
HOXA3-202ENST00000396352 GNG5P63218 68 aa12.64□□□□□ -0.39
HOXA3-202ENST00000396352 FAM71F2Q6NXP2 309 aa12.64□□□□□ -0.39
HOXA3-202ENST00000396352 OR10X1Q8NGY0 326 aa12.64□□□□□ -0.39
HOXA3-202ENST00000396352 PLAUP00749 431 aa12.64□□□□□ -0.39
HOXA3-202ENST00000396352 LINC00305Q7Z4B0 112 aa12.64□□□□□ -0.39
HOXA3-202ENST00000396352 RITA1Q96K30 269 aa12.64□□□□□ -0.39
HOXA3-202ENST00000396352 OTOGLQ3ZCN5 2332 aa12.64□□□□□ -0.39
HOXA3-202ENST00000396352 A0A1W2PPI3 338 aa12.63□□□□□ -0.39
HOXA3-202ENST00000396352 DPRXA6NFQ7 191 aa12.63□□□□□ -0.39
HOXA3-202ENST00000396352 VWC2LB2RUY7 222 aa12.63□□□□□ -0.39
HOXA3-202ENST00000396352 C22orf46C9J442 243 aa12.63□□□□□ -0.39
HOXA3-202ENST00000396352 K7EM74 188 aa12.63□□□□□ -0.39
HOXA3-202ENST00000396352 CORTO00230 105 aa12.63□□□□□ -0.39
HOXA3-202ENST00000396352 GAGE1Q13065 139 aa12.63□□□□□ -0.39
HOXA3-202ENST00000396352 BATFQ16520 125 aa12.63□□□□□ -0.39
HOXA3-202ENST00000396352 LYPD2Q6UXB3 125 aa12.63□□□□□ -0.39
HOXA3-202ENST00000396352 TMEM108Q6UXF1 575 aa12.63□□□□□ -0.39
HOXA3-202ENST00000396352 C19orf35Q6ZS72 473 aa12.63□□□□□ -0.39
HOXA3-202ENST00000396352 LINC00311Q8N616 119 aa12.63□□□□□ -0.39
HOXA3-202ENST00000396352 C8orf31Q8N9H6 132 aa12.63□□□□□ -0.39
HOXA3-202ENST00000396352 TMEM186Q96B77 213 aa12.63□□□□□ -0.39
HOXA3-202ENST00000396352 WASHC3Q9Y3C0 194 aa12.63□□□□□ -0.39
HOXA3-202ENST00000396352 SUB1P53999 127 aaKnown RBP eCLIP12.63□□□□□ -0.39
HOXA3-202ENST00000396352 CYB5R2Q6BCY4 276 aa12.63□□□□□ -0.39
HOXA3-202ENST00000396352 PRR27Q6MZM9 219 aa12.63□□□□□ -0.39
HOXA3-202ENST00000396352 CACNA1HO95180 2353 aa12.62□□□□□ -0.39
HOXA3-202ENST00000396352 TMEM178BH3BS89 294 aa12.62□□□□□ -0.39
HOXA3-202ENST00000396352 TNFRSF13BO14836 293 aaPredicted RBP12.62□□□□□ -0.39
HOXA3-202ENST00000396352 HYPMO75409 117 aa12.62□□□□□ -0.39
HOXA3-202ENST00000396352 IGLC2P0DOY2 106 aa12.62□□□□□ -0.39
HOXA3-202ENST00000396352 IGLC3P0DOY3 106 aa12.62□□□□□ -0.39
HOXA3-202ENST00000396352 NTF3P20783 257 aa12.62□□□□□ -0.39
HOXA3-202ENST00000396352 KLF5Q13887 457 aaPredicted RBP12.62□□□□□ -0.39
HOXA3-202ENST00000396352 H1FXQ92522 213 aaKnown RBP12.62□□□□□ -0.39
HOXA3-202ENST00000396352 WNT10AQ9GZT5 417 aa12.62□□□□□ -0.39
HOXA3-202ENST00000396352 SAP30LQ9HAJ7 183 aa12.62□□□□□ -0.39
HOXA3-202ENST00000396352 PLXNB1O43157 2135 aa12.62□□□□□ -0.39
HOXA3-202ENST00000396352 HIGD1CA8MV81 97 aa12.62□□□□□ -0.39
HOXA3-202ENST00000396352 SLC25A17O43808 307 aa12.62□□□□□ -0.39
HOXA3-202ENST00000396352 NPSP0C0P6 89 aa12.62□□□□□ -0.39
HOXA3-202ENST00000396352 ZNF137PP52743 207 aa12.62□□□□□ -0.39
HOXA3-202ENST00000396352 TNXAQ16473 311 aa12.62□□□□□ -0.39
HOXA3-202ENST00000396352 RBMXL3Q8N7X1 1067 aaKnown RBP12.62□□□□□ -0.39
HOXA3-202ENST00000396352 FAM57AQ8TBR7 257 aa12.62□□□□□ -0.39
HOXA3-202ENST00000396352 MOSP00540 346 aa12.61□□□□□ -0.39
HOXA3-202ENST00000396352 DLX6P56179 175 aa12.61□□□□□ -0.39
HOXA3-202ENST00000396352 PPIAL4EA0A075B759 164 aa12.61□□□□□ -0.39
HOXA3-202ENST00000396352 A0A1B0GXF2 115 aa12.61□□□□□ -0.39
HOXA3-202ENST00000396352 PPIAL4DF5H284 164 aa12.61□□□□□ -0.39
HOXA3-202ENST00000396352 OR2J3O76001 311 aa12.61□□□□□ -0.39
HOXA3-202ENST00000396352 PPIAL4FP0DN26 164 aa12.61□□□□□ -0.39
HOXA3-202ENST00000396352 ALKBH7Q9BT30 221 aaPredicted RBP12.61□□□□□ -0.39
HOXA3-202ENST00000396352 SSBP4Q9BWG4 385 aaPredicted RBP12.61□□□□□ -0.39
HOXA3-202ENST00000396352 CTSZQ9UBR2 303 aa12.61□□□□□ -0.39
HOXA3-202ENST00000396352 UQCR10Q9UDW1 63 aa12.61□□□□□ -0.39
HOXA3-202ENST00000396352 EPDR1Q9UM22 224 aa12.61□□□□□ -0.39
HOXA3-202ENST00000396352 KLF12Q9Y4X4 402 aa12.61□□□□□ -0.39
HOXA3-202ENST00000396352 PPIAL4AQ9Y536 164 aa12.61□□□□□ -0.39
HOXA3-202ENST00000396352 CRYGCP07315 174 aa12.61□□□□□ -0.39
HOXA3-202ENST00000396352 PVRIGQ6DKI7 326 aa12.61□□□□□ -0.39
HOXA3-202ENST00000396352 LHFPL4Q7Z7J7 247 aa12.61□□□□□ -0.39
HOXA3-202ENST00000396352 CLEC7AQ9BXN2 247 aa12.61□□□□□ -0.39
HOXA3-202ENST00000396352 RP1L1Q8IWN7 2480 aaPredicted RBP12.6□□□□□ -0.39
HOXA3-202ENST00000396352 DMXL2Q8TDJ6 3036 aa12.6□□□□□ -0.39
HOXA3-202ENST00000396352 IGLC7A0M8Q6 106 aa12.6□□□□□ -0.39
HOXA3-202ENST00000396352 HIST1H1EP10412 219 aaKnown RBP12.6□□□□□ -0.39
HOXA3-202ENST00000396352 GPR6P46095 362 aaPredicted RBP12.6□□□□□ -0.39
HOXA3-202ENST00000396352 MMDQ15546 238 aa12.6□□□□□ -0.39
HOXA3-202ENST00000396352 BORCS7Q96B45 105 aa12.6□□□□□ -0.39
HOXA3-202ENST00000396352 GOLT1BQ9Y3E0 138 aa12.6□□□□□ -0.39
HOXA3-202ENST00000396352 DCHS1Q96JQ0 3298 aa12.6□□□□□ -0.39
HOXA3-202ENST00000396352 EP300Q09472 2414 aaPredicted RBP12.6□□□□□ -0.39
HOXA3-202ENST00000396352 BSPH1Q075Z2 132 aa12.6□□□□□ -0.39
HOXA3-202ENST00000396352 WFDC8Q8IUA0 241 aa12.6□□□□□ -0.39
HOXA3-202ENST00000396352 SGK494Q96LW2 274 aa12.6□□□□□ -0.39
HOXA3-202ENST00000396352 TNFRSF19Q9NS68 423 aa12.6□□□□□ -0.39
HOXA3-202ENST00000396352 ORM2P19652 201 aa12.59□□□□□ -0.39
HOXA3-202ENST00000396352 LOXP28300 417 aaPredicted RBP12.59□□□□□ -0.39
HOXA3-202ENST00000396352 TFPI2P48307 235 aa12.59□□□□□ -0.39
HOXA3-202ENST00000396352 UBE2G1P62253 170 aa12.59□□□□□ -0.39
HOXA3-202ENST00000396352 MAJINQ3KP22 176 aa12.59□□□□□ -0.39
HOXA3-202ENST00000396352 LCN12Q6JVE5 192 aa12.59□□□□□ -0.39
HOXA3-202ENST00000396352 OR1B1Q8NGR6 318 aa12.59□□□□□ -0.39
HOXA3-202ENST00000396352 BLNKQ8WV28 456 aa12.59□□□□□ -0.39
HOXA3-202ENST00000396352 PERPQ96FX8 193 aa12.59□□□□□ -0.39
HOXA3-202ENST00000396352 CHRDL1Q9BU40 450 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms