RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 MUC21A0A0G2JKD1 596 aa12.8□□□□□ -0.36
SMARCD1-202ENST00000394963 MUC21A0A140T8X8 626 aa12.8□□□□□ -0.36
SMARCD1-202ENST00000394963 GRIFINA4D1Z8 144 aa12.8□□□□□ -0.36
SMARCD1-202ENST00000394963 OR2T8A6NH00 312 aa12.8□□□□□ -0.36
SMARCD1-202ENST00000394963 CLN5O75503 358 aa12.8□□□□□ -0.36
SMARCD1-202ENST00000394963 MUC21Q5SSG8 566 aa12.8□□□□□ -0.36
SMARCD1-202ENST00000394963 TET2Q6N021 2002 aaPredicted RBP12.8□□□□□ -0.36
SMARCD1-202ENST00000394963 C1QL4Q86Z23 238 aa12.8□□□□□ -0.36
SMARCD1-202ENST00000394963 OR8I2Q8N0Y5 310 aa12.8□□□□□ -0.36
SMARCD1-202ENST00000394963 FAM168AQ92567 244 aa12.8□□□□□ -0.36
SMARCD1-202ENST00000394963 JKAMPQ9P055 326 aa12.8□□□□□ -0.36
SMARCD1-202ENST00000394963 PMS2P5A8MQ11 134 aa12.8□□□□□ -0.36
SMARCD1-202ENST00000394963 HABP2Q14520 560 aaPredicted RBP12.8□□□□□ -0.36
SMARCD1-202ENST00000394963 CENPWQ5EE01 88 aa12.8□□□□□ -0.36
SMARCD1-202ENST00000394963 MORN5Q5VZ52 161 aa12.8□□□□□ -0.36
SMARCD1-202ENST00000394963 MRPL36Q9P0J6 103 aaKnown RBP12.8□□□□□ -0.36
SMARCD1-202ENST00000394963 IGKV1OR2-108A0A075B7D4 117 aa12.79□□□□□ -0.36
SMARCD1-202ENST00000394963 H0Y8G0 127 aa12.79□□□□□ -0.36
SMARCD1-202ENST00000394963 ZNF833PQ6ZTB9 187 aa12.79□□□□□ -0.36
SMARCD1-202ENST00000394963 ZNF114Q8NC26 417 aa12.79□□□□□ -0.36
SMARCD1-202ENST00000394963 OCC1Q8TAD7 63 aa12.79□□□□□ -0.36
SMARCD1-202ENST00000394963 SAMD10Q9BYL1 202 aa12.79□□□□□ -0.36
SMARCD1-202ENST00000394963 NTF3P20783 257 aa12.79□□□□□ -0.36
SMARCD1-202ENST00000394963 CSMD1Q96PZ7 3565 aa12.79□□□□□ -0.36
SMARCD1-202ENST00000394963 PDE6DO43924 150 aa12.78□□□□□ -0.36
SMARCD1-202ENST00000394963 TRGC1P0CF51 173 aa12.78□□□□□ -0.36
SMARCD1-202ENST00000394963 ELOBQ15370 118 aa12.78□□□□□ -0.36
SMARCD1-202ENST00000394963 IGFL4Q6B9Z1 124 aa12.78□□□□□ -0.36
SMARCD1-202ENST00000394963 ETFRF1Q6IPR1 90 aa12.78□□□□□ -0.36
SMARCD1-202ENST00000394963 C7orf69Q9H7B7 122 aa12.78□□□□□ -0.36
SMARCD1-202ENST00000394963 TMEM167BQ9NRX6 74 aa12.78□□□□□ -0.36
SMARCD1-202ENST00000394963 XKRY2A2RUG3 117 aa12.78□□□□□ -0.36
SMARCD1-202ENST00000394963 AMY1AP04745 511 aa12.78□□□□□ -0.36
SMARCD1-202ENST00000394963 OR52E5Q8NH55 327 aa12.78□□□□□ -0.36
SMARCD1-202ENST00000394963 OR51M1Q9H341 326 aa12.78□□□□□ -0.36
SMARCD1-202ENST00000394963 NAT8BQ9UHF3 227 aa12.78□□□□□ -0.36
SMARCD1-202ENST00000394963 ZNF705FA8MVS1 300 aaPredicted RBP12.78□□□□□ -0.36
SMARCD1-202ENST00000394963 NBR2O15453 112 aa12.78□□□□□ -0.36
SMARCD1-202ENST00000394963 IGHV3-11P01762 117 aa12.78□□□□□ -0.36
SMARCD1-202ENST00000394963 ZNF705DP0CH99 300 aaPredicted RBP12.78□□□□□ -0.36
SMARCD1-202ENST00000394963 ZNF705BP0CI00 300 aaPredicted RBP12.78□□□□□ -0.36
SMARCD1-202ENST00000394963 ZFP36P26651 326 aaKnown RBP12.78□□□□□ -0.36
SMARCD1-202ENST00000394963 BRS3P32247 399 aa12.78□□□□□ -0.36
SMARCD1-202ENST00000394963 ZNF137PP52743 207 aa12.77□□□□□ -0.36
SMARCD1-202ENST00000394963 PRNTQ86SH4 94 aa12.77□□□□□ -0.36
SMARCD1-202ENST00000394963 PFDN5Q99471 154 aa12.77□□□□□ -0.36
SMARCD1-202ENST00000394963 AP4M1O00189 453 aa12.77□□□□□ -0.37
SMARCD1-202ENST00000394963 CBLN1P23435 193 aa12.77□□□□□ -0.37
SMARCD1-202ENST00000394963 TMEM167AQ8TBQ9 72 aa12.77□□□□□ -0.37
SMARCD1-202ENST00000394963 IGHV2-70P01814 119 aa12.77□□□□□ -0.37
SMARCD1-202ENST00000394963 AGAP20933 346 aa12.77□□□□□ -0.37
SMARCD1-202ENST00000394963 GPR183P32249 361 aa12.77□□□□□ -0.37
SMARCD1-202ENST00000394963 TRAV8-1A0A0A6YYK1 113 aa12.76□□□□□ -0.37
SMARCD1-202ENST00000394963 ZNF785A8K8V0 405 aa12.76□□□□□ -0.37
SMARCD1-202ENST00000394963 LY86O95711 162 aa12.76□□□□□ -0.37
SMARCD1-202ENST00000394963 CX3CL1P78423 397 aa12.76□□□□□ -0.37
SMARCD1-202ENST00000394963 TPTE2P1Q5T6R2 138 aa12.76□□□□□ -0.37
SMARCD1-202ENST00000394963 CTDSP1Q9GZU7 261 aa12.76□□□□□ -0.37
SMARCD1-202ENST00000394963 SMDT1Q9H4I9 107 aa12.76□□□□□ -0.37
SMARCD1-202ENST00000394963 NDUFA4L2Q9NRX3 87 aa12.76□□□□□ -0.37
SMARCD1-202ENST00000394963 CLEC5AQ9NY25 188 aa12.76□□□□□ -0.37
SMARCD1-202ENST00000394963 STAG3L2P0CL84 134 aa12.76□□□□□ -0.37
SMARCD1-202ENST00000394963 STAG3L3P0CL85 134 aa12.76□□□□□ -0.37
SMARCD1-202ENST00000394963 SAA4P35542 130 aa12.76□□□□□ -0.37
SMARCD1-202ENST00000394963 EIF4EBP1Q13541 118 aaPredicted RBP12.76□□□□□ -0.37
SMARCD1-202ENST00000394963 TMEM177Q53S58 311 aa12.76□□□□□ -0.37
SMARCD1-202ENST00000394963 ITLN2Q8WWU7 325 aaPredicted RBP12.76□□□□□ -0.37
SMARCD1-202ENST00000394963 RAI1Q7Z5J4 1906 aaPredicted RBP12.76□□□□□ -0.37
SMARCD1-202ENST00000394963 FAM106CPP0CH98 169 aa12.76□□□□□ -0.37
SMARCD1-202ENST00000394963 PSG1P11464 419 aa12.76□□□□□ -0.37
SMARCD1-202ENST00000394963 EFNA4P52798 201 aa12.76□□□□□ -0.37
SMARCD1-202ENST00000394963 HIGD1AQ9Y241 93 aa12.76□□□□□ -0.37
SMARCD1-202ENST00000394963 VENTXO95231 258 aa12.75□□□□□ -0.37
SMARCD1-202ENST00000394963 SCGB1D1O95968 90 aa12.75□□□□□ -0.37
SMARCD1-202ENST00000394963 P0C879 139 aa12.75□□□□□ -0.37
SMARCD1-202ENST00000394963 SCRT1Q9BWW7 348 aa12.75□□□□□ -0.37
SMARCD1-202ENST00000394963 RPL29P47914 159 aaKnown RBP12.75□□□□□ -0.37
SMARCD1-202ENST00000394963 FAM120AOSQ5T036 256 aa12.75□□□□□ -0.37
SMARCD1-202ENST00000394963 CCDC144NLQ6NUI1 221 aa12.75□□□□□ -0.37
SMARCD1-202ENST00000394963 LYPD6BQ8NI32 183 aa12.75□□□□□ -0.37
SMARCD1-202ENST00000394963 PRO1933Q9H354 126 aa12.75□□□□□ -0.37
SMARCD1-202ENST00000394963 SRD5A3Q9H8P0 318 aa12.75□□□□□ -0.37
SMARCD1-202ENST00000394963 GAR1Q9NY12 217 aaKnown RBP12.75□□□□□ -0.37
SMARCD1-202ENST00000394963 TMEM250H0YL14 139 aa12.75□□□□□ -0.37
SMARCD1-202ENST00000394963 EXOC3-AS1Q8N2X6 119 aa12.75□□□□□ -0.37
SMARCD1-202ENST00000394963 ZNF257Q9Y2Q1 563 aa12.75□□□□□ -0.37
SMARCD1-202ENST00000394963 SNURFLB1AK76 121 aa12.74□□□□□ -0.37
SMARCD1-202ENST00000394963 G3V318 75 aa12.74□□□□□ -0.37
SMARCD1-202ENST00000394963 TGFAP01135 160 aa12.74□□□□□ -0.37
SMARCD1-202ENST00000394963 NBEAP1P0C6P0 100 aa12.74□□□□□ -0.37
SMARCD1-202ENST00000394963 GOLT1AQ6ZVE7 132 aa12.74□□□□□ -0.37
SMARCD1-202ENST00000394963 LCNL1Q6ZST4 164 aa12.74□□□□□ -0.37
SMARCD1-202ENST00000394963 SFRP2Q96HF1 295 aa12.74□□□□□ -0.37
SMARCD1-202ENST00000394963 PF4V1P10720 104 aa12.74□□□□□ -0.37
SMARCD1-202ENST00000394963 PDLIM4P50479 330 aa12.74□□□□□ -0.37
SMARCD1-202ENST00000394963 RPL19P84098 196 aaKnown RBP12.74□□□□□ -0.37
SMARCD1-202ENST00000394963 PMS2P11Q13670 270 aa12.74□□□□□ -0.37
SMARCD1-202ENST00000394963 C2orf83Q53S99 150 aa12.74□□□□□ -0.37
SMARCD1-202ENST00000394963 OR4F17Q8NGA8 305 aa12.74□□□□□ -0.37
SMARCD1-202ENST00000394963 ARPC1AQ92747 370 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms