RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 CGB1A6NKQ9 187 aa10.85□□□□□ -0.67
NFKB1-202ENST00000394820 SLAQ13239 276 aa10.85□□□□□ -0.67
NFKB1-202ENST00000394820 FAM27E3Q08E93 113 aa10.85□□□□□ -0.67
NFKB1-202ENST00000394820 ZNF146Q15072 292 aa10.85□□□□□ -0.67
NFKB1-202ENST00000394820 SRSF12Q8WXF0 261 aaKnown RBP10.85□□□□□ -0.67
NFKB1-202ENST00000394820 PRNDQ9UKY0 176 aa10.85□□□□□ -0.67
NFKB1-202ENST00000394820 TNRC6AQ8NDV7 1962 aaKnown RBP10.84□□□□□ -0.67
NFKB1-202ENST00000394820 HYPMO75409 117 aa10.84□□□□□ -0.67
NFKB1-202ENST00000394820 RIPPLY3P57055 190 aa10.84□□□□□ -0.67
NFKB1-202ENST00000394820 AARDQ4LEZ3 155 aa10.84□□□□□ -0.67
NFKB1-202ENST00000394820 C1orf174Q8IYL3 243 aa10.84□□□□□ -0.67
NFKB1-202ENST00000394820 A0A087X0K7 114 aa10.84□□□□□ -0.67
NFKB1-202ENST00000394820 NKX6-3A6NJ46 265 aa10.84□□□□□ -0.67
NFKB1-202ENST00000394820 CT45A10P0DMU9 189 aa10.84□□□□□ -0.67
NFKB1-202ENST00000394820 SPRNQ5BIV9 151 aa10.84□□□□□ -0.67
NFKB1-202ENST00000394820 DEFB104AQ8WTQ1 72 aa10.84□□□□□ -0.67
NFKB1-202ENST00000394820 IGFBPL1Q8WX77 278 aa10.84□□□□□ -0.67
NFKB1-202ENST00000394820 TNFRSF19Q9NS68 423 aa10.84□□□□□ -0.67
NFKB1-202ENST00000394820 TMEM210A6NLX4 147 aa10.83□□□□□ -0.67
NFKB1-202ENST00000394820 OR1L8Q8NGR8 309 aa10.83□□□□□ -0.67
NFKB1-202ENST00000394820 OR52E5Q8NH55 327 aa10.83□□□□□ -0.67
NFKB1-202ENST00000394820 MRPL20Q9BYC9 149 aaKnown RBP10.83□□□□□ -0.67
NFKB1-202ENST00000394820 TMEM191AQ9H0A3 160 aa10.83□□□□□ -0.67
NFKB1-202ENST00000394820 RNF7Q9UBF6 113 aa10.83□□□□□ -0.67
NFKB1-202ENST00000394820 IGKV3-7A0A075B6H7 116 aa10.83□□□□□ -0.68
NFKB1-202ENST00000394820 SAA1P0DJI8 122 aaPredicted RBP10.83□□□□□ -0.68
NFKB1-202ENST00000394820 HIST1H1EP10412 219 aaKnown RBP10.83□□□□□ -0.68
NFKB1-202ENST00000394820 RPL15P61313 204 aaKnown RBP10.83□□□□□ -0.68
NFKB1-202ENST00000394820 SCGB2A2Q13296 93 aa10.83□□□□□ -0.68
NFKB1-202ENST00000394820 RNF114Q9Y508 228 aa10.83□□□□□ -0.68
NFKB1-202ENST00000394820 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.83□□□□□ -0.68
NFKB1-202ENST00000394820 MMP23AO75900 390 aa10.83□□□□□ -0.68
NFKB1-202ENST00000394820 MT-ND6P03923 174 aa10.83□□□□□ -0.68
NFKB1-202ENST00000394820 TPTE2P1Q5T6R2 138 aa10.83□□□□□ -0.68
NFKB1-202ENST00000394820 TSKUQ8WUA8 353 aa10.83□□□□□ -0.68
NFKB1-202ENST00000394820 SONP18583 2426 aaKnown RBP10.83□□□□□ -0.68
NFKB1-202ENST00000394820 BTF3P20290 206 aaKnown RBP10.82□□□□□ -0.68
NFKB1-202ENST00000394820 AMMECR1LQ6DCA0 310 aa10.82□□□□□ -0.68
NFKB1-202ENST00000394820 CHRDL1Q9BU40 450 aa10.82□□□□□ -0.68
NFKB1-202ENST00000394820 MAP1LC3CQ9BXW4 147 aa10.82□□□□□ -0.68
NFKB1-202ENST00000394820 RAB9BQ9NP90 201 aa10.82□□□□□ -0.68
NFKB1-202ENST00000394820 FAM208BQ5VWN6 2430 aa10.82□□□□□ -0.68
NFKB1-202ENST00000394820 IGHV2OR16-5A0A0B4J2B6 119 aa10.82□□□□□ -0.68
NFKB1-202ENST00000394820 PRR33A8MZF0 331 aa10.82□□□□□ -0.68
NFKB1-202ENST00000394820 SS18L1O75177 396 aaPredicted RBP10.82□□□□□ -0.68
NFKB1-202ENST00000394820 IGHV3-23P01764 117 aa10.82□□□□□ -0.68
NFKB1-202ENST00000394820 TBR1Q16650 682 aa10.82□□□□□ -0.68
NFKB1-202ENST00000394820 NIT1Q86X76 327 aa10.82□□□□□ -0.68
NFKB1-202ENST00000394820 WDR31Q8NA23 367 aa10.82□□□□□ -0.68
NFKB1-202ENST00000394820 NUDT10Q8NFP7 164 aa10.82□□□□□ -0.68
NFKB1-202ENST00000394820 NUDT11Q96G61 164 aa10.82□□□□□ -0.68
NFKB1-202ENST00000394820 PTPRQQ9UMZ3 2332 aa10.82□□□□□ -0.68
NFKB1-202ENST00000394820 IGKV1D-17A0A075B6S4 117 aa10.82□□□□□ -0.68
NFKB1-202ENST00000394820 GGTLC3B5MD39 225 aa10.82□□□□□ -0.68
NFKB1-202ENST00000394820 MORN5Q5VZ52 161 aa10.82□□□□□ -0.68
NFKB1-202ENST00000394820 TMEM70Q9BUB7 260 aa10.82□□□□□ -0.68
NFKB1-202ENST00000394820 FNDC4Q9H6D8 234 aaPredicted RBP10.82□□□□□ -0.68
NFKB1-202ENST00000394820 MBNL3Q9NUK0 354 aaKnown RBP10.82□□□□□ -0.68
NFKB1-202ENST00000394820 SLC25A10Q9UBX3 287 aaPredicted RBP10.82□□□□□ -0.68
NFKB1-202ENST00000394820 IGHV1-18A0A0C4DH31 117 aa10.81□□□□□ -0.68
NFKB1-202ENST00000394820 K7EM74 188 aa10.81□□□□□ -0.68
NFKB1-202ENST00000394820 SLC25A34Q6PIV7 304 aa10.81□□□□□ -0.68
NFKB1-202ENST00000394820 Q6ZS49 121 aa10.81□□□□□ -0.68
NFKB1-202ENST00000394820 NCBP2LA6PVI3 153 aaKnown RBP10.81□□□□□ -0.68
NFKB1-202ENST00000394820 IQCF6A8MYZ5 107 aa10.81□□□□□ -0.68
NFKB1-202ENST00000394820 FAM87AP0C7U9 286 aa10.81□□□□□ -0.68
NFKB1-202ENST00000394820 Q8NFD4 153 aa10.81□□□□□ -0.68
NFKB1-202ENST00000394820 GP6Q9HCN6 339 aa10.81□□□□□ -0.68
NFKB1-202ENST00000394820 CSMD1Q96PZ7 3565 aa10.81□□□□□ -0.68
NFKB1-202ENST00000394820 LYNX1G3V0Z9 82 aa10.81□□□□□ -0.68
NFKB1-202ENST00000394820 PEX7O00628 323 aa10.81□□□□□ -0.68
NFKB1-202ENST00000394820 LYNX1P0DP58 116 aa10.81□□□□□ -0.68
NFKB1-202ENST00000394820 FBLN7Q53RD9 439 aa10.81□□□□□ -0.68
NFKB1-202ENST00000394820 GCSAMQ8N6F7 178 aa10.81□□□□□ -0.68
NFKB1-202ENST00000394820 RNASE8Q8TDE3 154 aaKnown RBP10.81□□□□□ -0.68
NFKB1-202ENST00000394820 PYGO2Q9BRQ0 406 aa10.81□□□□□ -0.68
NFKB1-202ENST00000394820 ZFP30Q9Y2G7 519 aa10.81□□□□□ -0.68
NFKB1-202ENST00000394820 ZZEF1O43149 2961 aa10.81□□□□□ -0.68
NFKB1-202ENST00000394820 ARHGAP32A7KAX9 2087 aa10.81□□□□□ -0.68
NFKB1-202ENST00000394820 MYO9AB2RTY4 2548 aa10.8□□□□□ -0.68
NFKB1-202ENST00000394820 NDUFB3O43676 98 aa10.8□□□□□ -0.68
NFKB1-202ENST00000394820 PRSS1P07477 247 aa10.8□□□□□ -0.68
NFKB1-202ENST00000394820 WNT2P09544 360 aa10.8□□□□□ -0.68
NFKB1-202ENST00000394820 TSPOP30536 169 aa10.8□□□□□ -0.68
NFKB1-202ENST00000394820 BRWD1-AS2P59051 145 aa10.8□□□□□ -0.68
NFKB1-202ENST00000394820 SSBP2P81877 361 aaPredicted RBP10.8□□□□□ -0.68
NFKB1-202ENST00000394820 IFI27L2Q9H2X8 130 aa10.8□□□□□ -0.68
NFKB1-202ENST00000394820 JPT1Q9UK76 154 aa10.8□□□□□ -0.68
NFKB1-202ENST00000394820 IGHV3-49A0A0A0MS15 119 aa10.8□□□□□ -0.68
NFKB1-202ENST00000394820 C15orf61A6NNL5 157 aa10.8□□□□□ -0.68
NFKB1-202ENST00000394820 VSTM5A8MXK1 200 aa10.8□□□□□ -0.68
NFKB1-202ENST00000394820 NBEAP1P0C6P0 100 aa10.8□□□□□ -0.68
NFKB1-202ENST00000394820 CEACAM8P31997 349 aaPredicted RBP10.8□□□□□ -0.68
NFKB1-202ENST00000394820 SFTA2Q6UW10 78 aa10.8□□□□□ -0.68
NFKB1-202ENST00000394820 LINC00173Q6ZV60 143 aa10.8□□□□□ -0.68
NFKB1-202ENST00000394820 BPIFA4PQ86YQ2 179 aa10.8□□□□□ -0.68
NFKB1-202ENST00000394820 EXOC3-AS1Q8N2X6 119 aa10.8□□□□□ -0.68
NFKB1-202ENST00000394820 CIARTQ8N365 385 aaPredicted RBP10.8□□□□□ -0.68
NFKB1-202ENST00000394820 SVEP1Q4LDE5 3571 aa10.8□□□□□ -0.68
NFKB1-202ENST00000394820 PSG1P11464 419 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms