RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 ZNF320A2RRD8 509 aa12.29□□□□□ -0.44
UBE2D3-207ENST00000394801 ZNF705GA8MUZ8 300 aaPredicted RBP12.29□□□□□ -0.44
UBE2D3-207ENST00000394801 PLXNB1O43157 2135 aa12.29□□□□□ -0.44
UBE2D3-207ENST00000394801 LIPFP07098 398 aa12.29□□□□□ -0.44
UBE2D3-207ENST00000394801 SNRPCP09234 159 aaKnown RBP12.29□□□□□ -0.44
UBE2D3-207ENST00000394801 ZNF90Q03938 601 aa12.29□□□□□ -0.44
UBE2D3-207ENST00000394801 CBLN4Q9NTU7 201 aa12.29□□□□□ -0.44
UBE2D3-207ENST00000394801 DCHS2Q6V1P9 2916 aa12.28□□□□□ -0.44
UBE2D3-207ENST00000394801 OR10J4P0C629 311 aa12.28□□□□□ -0.44
UBE2D3-207ENST00000394801 MFAP2P55001 183 aa12.28□□□□□ -0.44
UBE2D3-207ENST00000394801 C11orf71Q6IPW1 123 aa12.28□□□□□ -0.44
UBE2D3-207ENST00000394801 PPP1R27Q86WC6 154 aa12.28□□□□□ -0.44
UBE2D3-207ENST00000394801 TRAV5A0A0B4J249 113 aa12.28□□□□□ -0.44
UBE2D3-207ENST00000394801 COX7A2P2O60397 106 aa12.28□□□□□ -0.44
UBE2D3-207ENST00000394801 REG1AP05451 166 aa12.28□□□□□ -0.44
UBE2D3-207ENST00000394801 SUMO1P63165 101 aaKnown RBP12.28□□□□□ -0.44
UBE2D3-207ENST00000394801 TNXAQ16473 311 aa12.28□□□□□ -0.44
UBE2D3-207ENST00000394801 C10orf113Q5VZT2 155 aa12.28□□□□□ -0.44
UBE2D3-207ENST00000394801 TMEM116Q8NCL8 245 aa12.28□□□□□ -0.44
UBE2D3-207ENST00000394801 RPEQ96AT9 228 aa12.28□□□□□ -0.44
UBE2D3-207ENST00000394801 IL36BQ9NZH7 164 aa12.28□□□□□ -0.44
UBE2D3-207ENST00000394801 HNF1AP20823 631 aa12.27□□□□□ -0.44
UBE2D3-207ENST00000394801 GNG4P50150 75 aa12.27□□□□□ -0.44
UBE2D3-207ENST00000394801 BPIFB3P59826 476 aa12.27□□□□□ -0.44
UBE2D3-207ENST00000394801 IQCJQ1A5X6 159 aa12.27□□□□□ -0.44
UBE2D3-207ENST00000394801 HCP5Q6MZN7 132 aa12.27□□□□□ -0.44
UBE2D3-207ENST00000394801 OR5AU1Q8NGC0 362 aa12.27□□□□□ -0.44
UBE2D3-207ENST00000394801 C22orf46C9J442 243 aa12.27□□□□□ -0.45
UBE2D3-207ENST00000394801 IGHV3-48P01763 117 aa12.27□□□□□ -0.45
UBE2D3-207ENST00000394801 COX7A1P24310 79 aa12.27□□□□□ -0.45
UBE2D3-207ENST00000394801 YPEL3P61236 119 aaPredicted RBP12.27□□□□□ -0.45
UBE2D3-207ENST00000394801 PRB3Q04118 309 aaPredicted RBP12.27□□□□□ -0.45
UBE2D3-207ENST00000394801 CENPWQ5EE01 88 aa12.27□□□□□ -0.45
UBE2D3-207ENST00000394801 TRGV9Q99603 122 aa12.27□□□□□ -0.45
UBE2D3-207ENST00000394801 ZNF355PQ9NSJ1 428 aa12.27□□□□□ -0.45
UBE2D3-207ENST00000394801 TEX22C9J3V5 150 aa12.26□□□□□ -0.45
UBE2D3-207ENST00000394801 CORTO00230 105 aa12.26□□□□□ -0.45
UBE2D3-207ENST00000394801 UBE2L3P68036 154 aaKnown RBP12.26□□□□□ -0.45
UBE2D3-207ENST00000394801 OR11H6Q8NGC7 330 aa12.26□□□□□ -0.45
UBE2D3-207ENST00000394801 NEU4Q8WWR8 484 aaPredicted RBP12.26□□□□□ -0.45
UBE2D3-207ENST00000394801 TNFRSF19Q9NS68 423 aa12.26□□□□□ -0.45
UBE2D3-207ENST00000394801 TACC2O95359 2948 aa12.26□□□□□ -0.45
UBE2D3-207ENST00000394801 ATRXP46100 2492 aa12.26□□□□□ -0.45
UBE2D3-207ENST00000394801 EPG5Q9HCE0 2579 aa12.26□□□□□ -0.45
UBE2D3-207ENST00000394801 RUSC1-AS1Q66K80 236 aa12.26□□□□□ -0.45
UBE2D3-207ENST00000394801 TIMD4Q96H15 378 aa12.26□□□□□ -0.45
UBE2D3-207ENST00000394801 TRAPPC1Q9Y5R8 145 aa12.26□□□□□ -0.45
UBE2D3-207ENST00000394801 F11RQ9Y624 299 aaKnown RBP12.26□□□□□ -0.45
UBE2D3-207ENST00000394801 V9GYV3 84 aa12.26□□□□□ -0.45
UBE2D3-207ENST00000394801 LDLRAD2Q5SZI1 272 aa12.25□□□□□ -0.45
UBE2D3-207ENST00000394801 PAXXQ9BUH6 204 aa12.25□□□□□ -0.45
UBE2D3-207ENST00000394801 NBASA2RRP1 2371 aa12.25□□□□□ -0.45
UBE2D3-207ENST00000394801 HRNRQ86YZ3 2850 aaPredicted RBP12.25□□□□□ -0.45
UBE2D3-207ENST00000394801 EREGO14944 169 aa12.25□□□□□ -0.45
UBE2D3-207ENST00000394801 LY6HO94772 140 aa12.25□□□□□ -0.45
UBE2D3-207ENST00000394801 IGLV2-8P01709 118 aa12.25□□□□□ -0.45
UBE2D3-207ENST00000394801 CNN1P51911 297 aaKnown RBP12.25□□□□□ -0.45
UBE2D3-207ENST00000394801 IGF2BP2-AS1Q96M15 143 aa12.25□□□□□ -0.45
UBE2D3-207ENST00000394801 OSTCQ9NRP0 149 aa12.25□□□□□ -0.45
UBE2D3-207ENST00000394801 ONECUT1Q9UBC0 465 aa12.25□□□□□ -0.45
UBE2D3-207ENST00000394801 SLC17A3O00476 420 aa12.24□□□□□ -0.45
UBE2D3-207ENST00000394801 ERVFC1-1P60608 527 aa12.24□□□□□ -0.45
UBE2D3-207ENST00000394801 OR5I1Q13606 314 aa12.24□□□□□ -0.45
UBE2D3-207ENST00000394801 TIGITQ495A1 244 aa12.24□□□□□ -0.45
UBE2D3-207ENST00000394801 TPTE2P1Q5T6R2 138 aa12.24□□□□□ -0.45
UBE2D3-207ENST00000394801 GBGT1Q8N5D6 347 aa12.24□□□□□ -0.45
UBE2D3-207ENST00000394801 STXBP6Q8NFX7 210 aa12.24□□□□□ -0.45
UBE2D3-207ENST00000394801 C22orf15Q8WYQ4 148 aa12.24□□□□□ -0.45
UBE2D3-207ENST00000394801 FXYD5Q96DB9 178 aa12.24□□□□□ -0.45
UBE2D3-207ENST00000394801 SRSF8Q9BRL6 282 aaKnown RBP12.24□□□□□ -0.45
UBE2D3-207ENST00000394801 FBXL15Q9H469 300 aa12.24□□□□□ -0.45
UBE2D3-207ENST00000394801 M0R1W7 72 aa12.23□□□□□ -0.45
UBE2D3-207ENST00000394801 PYYP10082 97 aa12.23□□□□□ -0.45
UBE2D3-207ENST00000394801 BTF3P20290 206 aaKnown RBP12.23□□□□□ -0.45
UBE2D3-207ENST00000394801 LGALS4P56470 323 aa12.23□□□□□ -0.45
UBE2D3-207ENST00000394801 LINC00305Q7Z4B0 112 aa12.23□□□□□ -0.45
UBE2D3-207ENST00000394801 CDC42EP3Q9UKI2 254 aa12.23□□□□□ -0.45
UBE2D3-207ENST00000394801 ISLRO14498 428 aa12.23□□□□□ -0.45
UBE2D3-207ENST00000394801 HTR1DP28221 377 aa12.23□□□□□ -0.45
UBE2D3-207ENST00000394801 PLP1P60201 277 aa12.23□□□□□ -0.45
UBE2D3-207ENST00000394801 C1orf194Q5T5A4 169 aa12.23□□□□□ -0.45
UBE2D3-207ENST00000394801 DTX2Q86UW9 622 aa12.23□□□□□ -0.45
UBE2D3-207ENST00000394801 SRSF12Q8WXF0 261 aaKnown RBP12.23□□□□□ -0.45
UBE2D3-207ENST00000394801 TMEM68Q96MH6 324 aa12.23□□□□□ -0.45
UBE2D3-207ENST00000394801 SNHG12Q9BXW3 62 aa12.23□□□□□ -0.45
UBE2D3-207ENST00000394801 DPM3Q9P2X0 92 aa12.23□□□□□ -0.45
UBE2D3-207ENST00000394801 FCN1O00602 326 aa12.22□□□□□ -0.45
UBE2D3-207ENST00000394801 MYCNOSP40205 109 aa12.22□□□□□ -0.45
UBE2D3-207ENST00000394801 PERPQ96FX8 193 aa12.22□□□□□ -0.45
UBE2D3-207ENST00000394801 M0R143 59 aa12.22□□□□□ -0.45
UBE2D3-207ENST00000394801 TIMM23O14925 209 aa12.22□□□□□ -0.45
UBE2D3-207ENST00000394801 ARF6P62330 175 aa12.22□□□□□ -0.45
UBE2D3-207ENST00000394801 RPEL1Q2QD12 228 aa12.22□□□□□ -0.45
UBE2D3-207ENST00000394801 C19orf35Q6ZS72 473 aa12.22□□□□□ -0.45
UBE2D3-207ENST00000394801 MOSP00540 346 aa12.21□□□□□ -0.45
UBE2D3-207ENST00000394801 PRTN3P24158 256 aa12.21□□□□□ -0.45
UBE2D3-207ENST00000394801 ZNF329Q86UD4 541 aa12.21□□□□□ -0.45
UBE2D3-207ENST00000394801 CFHR4Q92496 578 aa12.21□□□□□ -0.45
UBE2D3-207ENST00000394801 SSBP3Q9BWW4 388 aaPredicted RBP12.21□□□□□ -0.45
UBE2D3-207ENST00000394801 LOC105371242A0A075B767 164 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms