RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 K7EIM0 57 aa17.53■□□□□ 0.4
HMGA2-203ENST00000393578 ATP5G3P48201 142 aa17.53■□□□□ 0.4
HMGA2-203ENST00000393578 BRD3OSQ6XYD6 125 aa17.53■□□□□ 0.4
HMGA2-203ENST00000393578 RPUSD4Q96CM3 377 aaKnown RBP17.53■□□□□ 0.4
HMGA2-203ENST00000393578 PARLQ9H300 379 aa17.53■□□□□ 0.4
HMGA2-203ENST00000393578 ARL2-SNX15V9GYD0 113 aa17.53■□□□□ 0.4
HMGA2-203ENST00000393578 A0A087WWC5 75 aa17.52■□□□□ 0.4
HMGA2-203ENST00000393578 F6UZH7 168 aa17.52■□□□□ 0.4
HMGA2-203ENST00000393578 PATE2Q6UY27 113 aa17.52■□□□□ 0.4
HMGA2-203ENST00000393578 MEGF9Q9H1U4 602 aa17.52■□□□□ 0.4
HMGA2-203ENST00000393578 DOK5Q9P104 306 aa17.52■□□□□ 0.4
HMGA2-203ENST00000393578 NAT8Q9UHE5 227 aa17.52■□□□□ 0.4
HMGA2-203ENST00000393578 USP9YO00507 2555 aaPredicted RBP17.52■□□□□ 0.39
HMGA2-203ENST00000393578 IGLC1P0CG04 106 aa17.51■□□□□ 0.39
HMGA2-203ENST00000393578 IGHV4-38-2P0DP08 117 aa17.51■□□□□ 0.39
HMGA2-203ENST00000393578 KRTAP10-9P60411 292 aa17.51■□□□□ 0.39
HMGA2-203ENST00000393578 ZNF674Q2M3X9 581 aa17.51■□□□□ 0.39
HMGA2-203ENST00000393578 ZNF503Q96F45 646 aa17.51■□□□□ 0.39
HMGA2-203ENST00000393578 BEX4Q9NWD9 120 aaPredicted RBP17.51■□□□□ 0.39
HMGA2-203ENST00000393578 YTHDF2Q9Y5A9 579 aaKnown RBP17.51■□□□□ 0.39
HMGA2-203ENST00000393578 CHD6Q8TD26 2715 aa17.51■□□□□ 0.39
HMGA2-203ENST00000393578 ANKRD17O75179 2603 aaKnown RBP17.51■□□□□ 0.39
HMGA2-203ENST00000393578 IGLV11-55A0A075B6I3 123 aa17.51■□□□□ 0.39
HMGA2-203ENST00000393578 A0A096LNT2 108 aa17.51■□□□□ 0.39
HMGA2-203ENST00000393578 OR7C2O60412 319 aa17.51■□□□□ 0.39
HMGA2-203ENST00000393578 EGR2P11161 476 aaPredicted RBP17.51■□□□□ 0.39
HMGA2-203ENST00000393578 TMEM241Q24JQ0 296 aa17.51■□□□□ 0.39
HMGA2-203ENST00000393578 C15orf54Q8N8G6 183 aa17.51■□□□□ 0.39
HMGA2-203ENST00000393578 KLF17Q5JT82 389 aaPredicted RBP17.5■□□□□ 0.39
HMGA2-203ENST00000393578 OR51G1Q8NGK1 321 aa17.5■□□□□ 0.39
HMGA2-203ENST00000393578 FAM167A-AS1Q96KT0 104 aa17.5■□□□□ 0.39
HMGA2-203ENST00000393578 RBM14Q96PK6 669 aaKnown RBP17.5■□□□□ 0.39
HMGA2-203ENST00000393578 FANCD2OSQ96PS1 177 aa17.5■□□□□ 0.39
HMGA2-203ENST00000393578 CENPEQ02224 2701 aa17.5■□□□□ 0.39
HMGA2-203ENST00000393578 A0A0U1RQK1 487 aa17.49■□□□□ 0.39
HMGA2-203ENST00000393578 NPPCP23582 126 aa17.49■□□□□ 0.39
HMGA2-203ENST00000393578 KIAA0141Q14154 515 aaPredicted RBP17.49■□□□□ 0.39
HMGA2-203ENST00000393578 MORN5Q5VZ52 161 aa17.49■□□□□ 0.39
HMGA2-203ENST00000393578 LINC01356Q8N9X3 169 aa17.49■□□□□ 0.39
HMGA2-203ENST00000393578 SLC25A2Q9BXI2 301 aa17.49■□□□□ 0.39
HMGA2-203ENST00000393578 COLCA2A8K830 154 aa17.49■□□□□ 0.39
HMGA2-203ENST00000393578 PLP1P60201 277 aa17.49■□□□□ 0.39
HMGA2-203ENST00000393578 HSPB9Q9BQS6 159 aa17.49■□□□□ 0.39
HMGA2-203ENST00000393578 GSX1Q9H4S2 264 aaPredicted RBP17.49■□□□□ 0.39
HMGA2-203ENST00000393578 ZNF355PQ9NSJ1 428 aa17.49■□□□□ 0.39
HMGA2-203ENST00000393578 ORM2P19652 201 aa17.48■□□□□ 0.39
HMGA2-203ENST00000393578 SGMS2Q8NHU3 365 aa17.48■□□□□ 0.39
HMGA2-203ENST00000393578 PIFOQ8TCI5 191 aa17.48■□□□□ 0.39
HMGA2-203ENST00000393578 THYN1Q9P016 225 aa17.48■□□□□ 0.39
HMGA2-203ENST00000393578 MAP1AP78559 2803 aaPredicted RBP17.48■□□□□ 0.39
HMGA2-203ENST00000393578 TRAV5A0A0B4J249 113 aa17.48■□□□□ 0.39
HMGA2-203ENST00000393578 DEFB113Q30KQ7 82 aa17.48■□□□□ 0.39
HMGA2-203ENST00000393578 LINC00305Q7Z4B0 112 aa17.48■□□□□ 0.39
HMGA2-203ENST00000393578 LRRC75A-AS1Q8N1F1 130 aa17.48■□□□□ 0.39
HMGA2-203ENST00000393578 C5orf56Q8N8D9 126 aa17.48■□□□□ 0.39
HMGA2-203ENST00000393578 OR5AU1Q8NGC0 362 aa17.48■□□□□ 0.39
HMGA2-203ENST00000393578 OR1B1Q8NGR6 318 aa17.48■□□□□ 0.39
HMGA2-203ENST00000393578 UHRF2Q96PU4 802 aa17.48■□□□□ 0.39
HMGA2-203ENST00000393578 HYPMO75409 117 aa17.47■□□□□ 0.39
HMGA2-203ENST00000393578 FABP1P07148 127 aa17.47■□□□□ 0.39
HMGA2-203ENST00000393578 ATF4P18848 351 aaPredicted RBP17.47■□□□□ 0.39
HMGA2-203ENST00000393578 ISOC2Q96AB3 205 aa17.47■□□□□ 0.39
HMGA2-203ENST00000393578 CSMD2Q7Z408 3487 aa17.47■□□□□ 0.39
HMGA2-203ENST00000393578 PTPN13Q12923 2485 aa17.47■□□□□ 0.39
HMGA2-203ENST00000393578 NDUFB4O95168 129 aa17.46■□□□□ 0.39
HMGA2-203ENST00000393578 OR2C1O95371 312 aa17.46■□□□□ 0.39
HMGA2-203ENST00000393578 IGKV1-17P01599 117 aa17.46■□□□□ 0.39
HMGA2-203ENST00000393578 PSG1P11464 419 aa17.46■□□□□ 0.39
HMGA2-203ENST00000393578 MOB4Q9Y3A3 225 aa17.46■□□□□ 0.39
HMGA2-203ENST00000393578 OR10J4P0C629 311 aa17.46■□□□□ 0.39
HMGA2-203ENST00000393578 PLA2G2AP14555 144 aa17.46■□□□□ 0.39
HMGA2-203ENST00000393578 LOXL1Q08397 574 aaPredicted RBP17.46■□□□□ 0.39
HMGA2-203ENST00000393578 TIGITQ495A1 244 aa17.46■□□□□ 0.39
HMGA2-203ENST00000393578 OR5T1Q8NG75 326 aa17.46■□□□□ 0.39
HMGA2-203ENST00000393578 ZNF48Q96MX3 618 aaPredicted RBP17.46■□□□□ 0.39
HMGA2-203ENST00000393578 ABCA1O95477 2261 aa17.45■□□□□ 0.38
HMGA2-203ENST00000393578 CXorf65A6NEN9 183 aa17.45■□□□□ 0.38
HMGA2-203ENST00000393578 SSX3Q99909 188 aa17.45■□□□□ 0.38
HMGA2-203ENST00000393578 TMEM242Q9NWH2 141 aa17.45■□□□□ 0.38
HMGA2-203ENST00000393578 POLQO75417 2590 aa17.44■□□□□ 0.38
HMGA2-203ENST00000393578 A0A1W2PRE2 83 aa17.44■□□□□ 0.38
HMGA2-203ENST00000393578 AVPP01185 164 aa17.44■□□□□ 0.38
HMGA2-203ENST00000393578 RD3LP0DJH9 198 aa17.44■□□□□ 0.38
HMGA2-203ENST00000393578 MFAP4P55083 255 aa17.44■□□□□ 0.38
HMGA2-203ENST00000393578 RPL23P62829 140 aaKnown RBP17.44■□□□□ 0.38
HMGA2-203ENST00000393578 UBE2L3P68036 154 aaKnown RBP17.44■□□□□ 0.38
HMGA2-203ENST00000393578 ADIRFQ15847 76 aa17.44■□□□□ 0.38
HMGA2-203ENST00000393578 TMEM219Q86XT9 240 aa17.44■□□□□ 0.38
HMGA2-203ENST00000393578 STXBP6Q8NFX7 210 aa17.44■□□□□ 0.38
HMGA2-203ENST00000393578 TMEM68Q96MH6 324 aa17.44■□□□□ 0.38
HMGA2-203ENST00000393578 PAXXQ9BUH6 204 aa17.44■□□□□ 0.38
HMGA2-203ENST00000393578 TMUB1Q9BVT8 246 aa17.44■□□□□ 0.38
HMGA2-203ENST00000393578 PRELID1Q9Y255 219 aa17.44■□□□□ 0.38
HMGA2-203ENST00000393578 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.44■□□□□ 0.386e-13■□□□□ 10.5
HMGA2-203ENST00000393578 TRAV30A0A087WSZ9 112 aa17.44■□□□□ 0.38
HMGA2-203ENST00000393578 SCO2A0A1W2PP80 73 aa17.44■□□□□ 0.38
HMGA2-203ENST00000393578 ATP6V0E1O15342 81 aa17.44■□□□□ 0.38
HMGA2-203ENST00000393578 MT-ND4LP03901 98 aa17.44■□□□□ 0.38
HMGA2-203ENST00000393578 FAM110DQ8TAY7 271 aaPredicted RBP17.44■□□□□ 0.38
HMGA2-203ENST00000393578 C11orf52Q96A22 123 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms