RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 OR13C6PQ8NH95 151 aa10.9□□□□□ -0.66
LCA5-202ENST00000392959 HEATR1Q9H583 2144 aaKnown RBP10.9□□□□□ -0.66
LCA5-202ENST00000392959 CA1P00915 261 aaPredicted RBP10.9□□□□□ -0.66
LCA5-202ENST00000392959 LEPP41159 167 aa10.9□□□□□ -0.66
LCA5-202ENST00000392959 TSKUQ8WUA8 353 aa10.9□□□□□ -0.66
LCA5-202ENST00000392959 ABCA4P78363 2273 aa10.9□□□□□ -0.66
LCA5-202ENST00000392959 FOXL1Q12952 345 aa10.9□□□□□ -0.67
LCA5-202ENST00000392959 NDUFA3O95167 84 aa10.89□□□□□ -0.67
LCA5-202ENST00000392959 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.89□□□□□ -0.67
LCA5-202ENST00000392959 KLRB1Q12918 225 aa10.89□□□□□ -0.67
LCA5-202ENST00000392959 LINC01551Q86U37 167 aa10.89□□□□□ -0.67
LCA5-202ENST00000392959 ZCCHC24Q8N2G6 241 aaKnown RBP10.89□□□□□ -0.67
LCA5-202ENST00000392959 PINLYPA6NC86 204 aa10.89□□□□□ -0.67
LCA5-202ENST00000392959 ZFP36L1Q07352 338 aaKnown RBP10.89□□□□□ -0.67
LCA5-202ENST00000392959 CSRP2Q16527 193 aa10.89□□□□□ -0.67
LCA5-202ENST00000392959 FAM71F2Q6NXP2 309 aa10.89□□□□□ -0.67
LCA5-202ENST00000392959 SLC50A1Q9BRV3 221 aa10.89□□□□□ -0.67
LCA5-202ENST00000392959 PHF3Q92576 2039 aaKnown RBP10.89□□□□□ -0.67
LCA5-202ENST00000392959 PPBPP02775 128 aa10.89□□□□□ -0.67
LCA5-202ENST00000392959 OR4X2Q8NGF9 303 aa10.89□□□□□ -0.67
LCA5-202ENST00000392959 NHP2Q9NX24 153 aaKnown RBP10.89□□□□□ -0.67
LCA5-202ENST00000392959 LOC285556D6RIA3 1793 aa10.88□□□□□ -0.67
LCA5-202ENST00000392959 ABHD17AQ96GS6 310 aa10.88□□□□□ -0.67
LCA5-202ENST00000392959 TNFSF13O75888 250 aa10.88□□□□□ -0.67
LCA5-202ENST00000392959 IGKV1-5P01602 117 aa10.88□□□□□ -0.67
LCA5-202ENST00000392959 TMEM14EPQ6UXP3 125 aa10.88□□□□□ -0.67
LCA5-202ENST00000392959 COQ2Q96H96 371 aa10.88□□□□□ -0.67
LCA5-202ENST00000392959 NXT2Q9NPJ8 142 aaKnown RBP10.88□□□□□ -0.67
LCA5-202ENST00000392959 SRRM5B3KS81 715 aa10.88□□□□□ -0.67
LCA5-202ENST00000392959 PSPNO60542 156 aa10.88□□□□□ -0.67
LCA5-202ENST00000392959 DERL1Q9BUN8 251 aa10.88□□□□□ -0.67
LCA5-202ENST00000392959 RPUSD1Q9UJJ7 312 aaKnown RBP10.88□□□□□ -0.67
LCA5-202ENST00000392959 ZNF257Q9Y2Q1 563 aa10.88□□□□□ -0.67
LCA5-202ENST00000392959 GBF1Q92538 1859 aa10.88□□□□□ -0.67
LCA5-202ENST00000392959 DOCK7Q96N67 2140 aa10.88□□□□□ -0.67
LCA5-202ENST00000392959 NUTF2P61970 127 aaKnown RBP10.87□□□□□ -0.67
LCA5-202ENST00000392959 CACNG7P62955 275 aa10.87□□□□□ -0.67
LCA5-202ENST00000392959 HGFACQ04756 655 aa10.87□□□□□ -0.67
LCA5-202ENST00000392959 SRSF4Q08170 494 aaKnown RBP10.87□□□□□ -0.67
LCA5-202ENST00000392959 FBLN7Q53RD9 439 aa10.87□□□□□ -0.67
LCA5-202ENST00000392959 GGNQ86UU5 652 aa10.87□□□□□ -0.67
LCA5-202ENST00000392959 RFNGQ9Y644 331 aa10.87□□□□□ -0.67
LCA5-202ENST00000392959 HAX1O00165 279 aa10.87□□□□□ -0.67
LCA5-202ENST00000392959 PRB3Q04118 309 aaPredicted RBP10.87□□□□□ -0.67
LCA5-202ENST00000392959 RNF144BQ7Z419 303 aa10.87□□□□□ -0.67
LCA5-202ENST00000392959 C5orf63A6NC05 138 aa10.87□□□□□ -0.67
LCA5-202ENST00000392959 TSPAN13O95857 204 aa10.87□□□□□ -0.67
LCA5-202ENST00000392959 ATP5L2Q7Z4Y8 100 aa10.87□□□□□ -0.67
LCA5-202ENST00000392959 OR10W1Q8NGF6 305 aa10.87□□□□□ -0.67
LCA5-202ENST00000392959 AGMATQ9BSE5 352 aa10.87□□□□□ -0.67
LCA5-202ENST00000392959 IGHV1-18A0A0C4DH31 117 aa10.87□□□□□ -0.67
LCA5-202ENST00000392959 FAM169BQ8N8A8 192 aa10.87□□□□□ -0.67
LCA5-202ENST00000392959 CHCHD1Q96BP2 118 aaKnown RBP10.87□□□□□ -0.67
LCA5-202ENST00000392959 VKORC1Q9BQB6 163 aa10.87□□□□□ -0.67
LCA5-202ENST00000392959 MEGF9Q9H1U4 602 aa10.87□□□□□ -0.67
LCA5-202ENST00000392959 TRAV5A0A0B4J249 113 aa10.86□□□□□ -0.67
LCA5-202ENST00000392959 IGHV3-11P01762 117 aa10.86□□□□□ -0.67
LCA5-202ENST00000392959 PAX1P15863 534 aa10.86□□□□□ -0.67
LCA5-202ENST00000392959 QRFPP83859 136 aa10.86□□□□□ -0.67
LCA5-202ENST00000392959 PYY3Q5JQD4 70 aa10.86□□□□□ -0.67
LCA5-202ENST00000392959 PNRC2Q9NPJ4 139 aaKnown RBP10.86□□□□□ -0.67
LCA5-202ENST00000392959 NUDT10Q8NFP7 164 aa10.86□□□□□ -0.67
LCA5-202ENST00000392959 C2orf88Q9BSF0 95 aa10.86□□□□□ -0.67
LCA5-202ENST00000392959 DPM2O94777 84 aa10.86□□□□□ -0.67
LCA5-202ENST00000392959 CD24P25063 80 aa10.86□□□□□ -0.67
LCA5-202ENST00000392959 RNASE4P34096 147 aaKnown RBP10.86□□□□□ -0.67
LCA5-202ENST00000392959 IFI27L1Q96BM0 104 aa10.86□□□□□ -0.67
LCA5-202ENST00000392959 ST20Q9HBF5 79 aa10.86□□□□□ -0.67
LCA5-202ENST00000392959 H3BRM9 83 aa10.86□□□□□ -0.67
LCA5-202ENST00000392959 C10orf55Q5SWW7 151 aa10.86□□□□□ -0.67
LCA5-202ENST00000392959 FNDC4Q9H6D8 234 aaPredicted RBP10.86□□□□□ -0.67
LCA5-202ENST00000392959 PCNX1Q96RV3 2341 aa10.85□□□□□ -0.67
LCA5-202ENST00000392959 ZNF124Q15973 351 aa10.85□□□□□ -0.67
LCA5-202ENST00000392959 C17orf82Q86X59 251 aaPredicted RBP10.85□□□□□ -0.67
LCA5-202ENST00000392959 OR5AN1Q8NGI8 311 aa10.85□□□□□ -0.67
LCA5-202ENST00000392959 ORAOV1Q8WV07 137 aa10.85□□□□□ -0.67
LCA5-202ENST00000392959 SEPSECSQ9HD40 501 aaKnown RBP10.85□□□□□ -0.67
LCA5-202ENST00000392959 SPRR3Q9UBC9 169 aa10.85□□□□□ -0.67
LCA5-202ENST00000392959 USF3Q68DE3 2245 aa10.85□□□□□ -0.67
LCA5-202ENST00000392959 SPATA31B1PQ5VZV4 182 aa10.85□□□□□ -0.67
LCA5-202ENST00000392959 TMEM42Q69YG0 159 aa10.85□□□□□ -0.67
LCA5-202ENST00000392959 C10orf126Q8N4M7 172 aa10.85□□□□□ -0.67
LCA5-202ENST00000392959 OR2K2Q8NGT1 345 aa10.85□□□□□ -0.67
LCA5-202ENST00000392959 C8orf46Q8TAG6 207 aa10.85□□□□□ -0.67
LCA5-202ENST00000392959 TMEM101Q96IK0 257 aa10.85□□□□□ -0.67
LCA5-202ENST00000392959 A0A0G2JMZ2 1700 aa10.85□□□□□ -0.67
LCA5-202ENST00000392959 LRRC37A2A6NM11 1700 aa10.85□□□□□ -0.67
LCA5-202ENST00000392959 FANCMQ8IYD8 2048 aa10.85□□□□□ -0.67
LCA5-202ENST00000392959 TGFAP01135 160 aa10.85□□□□□ -0.67
LCA5-202ENST00000392959 SELLP14151 372 aa10.85□□□□□ -0.67
LCA5-202ENST00000392959 C1orf194Q5T5A4 169 aa10.85□□□□□ -0.67
LCA5-202ENST00000392959 DUX3Q96PT4 197 aa10.85□□□□□ -0.67
LCA5-202ENST00000392959 CCL19Q99731 98 aa10.85□□□□□ -0.67
LCA5-202ENST00000392959 MED13LQ71F56 2210 aa10.85□□□□□ -0.67
LCA5-202ENST00000392959 PPIFP30405 207 aaKnown RBP10.84□□□□□ -0.67
LCA5-202ENST00000392959 SRSF1Q07955 248 aaKnown RBP eCLIP10.84□□□□□ -0.67
LCA5-202ENST00000392959 ZNF585BQ52M93 769 aa10.84□□□□□ -0.67
LCA5-202ENST00000392959 IGHV1-46P01743 117 aa10.84□□□□□ -0.67
LCA5-202ENST00000392959 LDLRAD2Q5SZI1 272 aa10.84□□□□□ -0.67
LCA5-202ENST00000392959 SAMD13Q5VXD3 122 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms