RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 A0A0U1RQK1 487 aa16.85■□□□□ 0.29
SPHK1-202ENST00000392496 C11orf94C9JXX5 98 aa16.85■□□□□ 0.29
SPHK1-202ENST00000392496 COX7A2P2O60397 106 aa16.85■□□□□ 0.29
SPHK1-202ENST00000392496 CLN5O75503 358 aa16.85■□□□□ 0.29
SPHK1-202ENST00000392496 EGR2P11161 476 aaPredicted RBP16.85■□□□□ 0.29
SPHK1-202ENST00000392496 PQLC2Q6ZP29 291 aa16.85■□□□□ 0.29
SPHK1-202ENST00000392496 C20orf24Q9BUV8 137 aa16.85■□□□□ 0.29
SPHK1-202ENST00000392496 RPS10P5Q9NQ39 176 aa16.85■□□□□ 0.29
SPHK1-202ENST00000392496 TMA7Q9Y2S6 64 aaKnown RBP16.85■□□□□ 0.29
SPHK1-202ENST00000392496 IGLV11-55A0A075B6I3 123 aa16.84■□□□□ 0.29
SPHK1-202ENST00000392496 C8orf88P0DMB2 117 aa16.84■□□□□ 0.29
SPHK1-202ENST00000392496 AKIRIN2Q53H80 203 aa16.84■□□□□ 0.29
SPHK1-202ENST00000392496 CBLN2Q8IUK8 224 aa16.84■□□□□ 0.29
SPHK1-202ENST00000392496 MBD6Q96DN6 1003 aa16.84■□□□□ 0.29
SPHK1-202ENST00000392496 RBM14Q96PK6 669 aaKnown RBP16.84■□□□□ 0.29
SPHK1-202ENST00000392496 TMEM167BQ9NRX6 74 aa16.84■□□□□ 0.29
SPHK1-202ENST00000392496 FBN2P35556 2912 aa16.84■□□□□ 0.29
SPHK1-202ENST00000392496 PDE6DO43924 150 aa16.84■□□□□ 0.29
SPHK1-202ENST00000392496 IGLC1P0CG04 106 aa16.84■□□□□ 0.29
SPHK1-202ENST00000392496 UBE2G2P60604 165 aa16.84■□□□□ 0.29
SPHK1-202ENST00000392496 C10orf113Q5VZT2 155 aa16.84■□□□□ 0.29
SPHK1-202ENST00000392496 PIFOQ8TCI5 191 aa16.84■□□□□ 0.29
SPHK1-202ENST00000392496 FANCD2OSQ96PS1 177 aa16.84■□□□□ 0.29
SPHK1-202ENST00000392496 SMCO4Q9NRQ5 59 aa16.84■□□□□ 0.29
SPHK1-202ENST00000392496 ARL2-SNX15V9GYD0 113 aa16.84■□□□□ 0.29
SPHK1-202ENST00000392496 FLNBO75369 2602 aaKnown RBP16.83■□□□□ 0.29
SPHK1-202ENST00000392496 ANKRD17O75179 2603 aaKnown RBP16.83■□□□□ 0.28
SPHK1-202ENST00000392496 ELOA3CA0A087WX78 387 aaPredicted RBP16.83■□□□□ 0.28
SPHK1-202ENST00000392496 J3QLI3 93 aa16.83■□□□□ 0.28
SPHK1-202ENST00000392496 CST9LP1Q5W188 147 aa16.83■□□□□ 0.28
SPHK1-202ENST00000392496 PATE2Q6UY27 113 aa16.83■□□□□ 0.28
SPHK1-202ENST00000392496 SGMS2Q8NHU3 365 aa16.83■□□□□ 0.28
SPHK1-202ENST00000392496 HSPB9Q9BQS6 159 aa16.83■□□□□ 0.28
SPHK1-202ENST00000392496 APCP25054 2843 aa16.83■□□□□ 0.28
SPHK1-202ENST00000392496 ZNF727A8MUV8 499 aa16.82■□□□□ 0.28
SPHK1-202ENST00000392496 F6UZH7 168 aa16.82■□□□□ 0.28
SPHK1-202ENST00000392496 PLP1P60201 277 aa16.82■□□□□ 0.28
SPHK1-202ENST00000392496 PNRC1Q12796 327 aaPredicted RBP16.82■□□□□ 0.28
SPHK1-202ENST00000392496 KLF17Q5JT82 389 aaPredicted RBP16.82■□□□□ 0.28
SPHK1-202ENST00000392496 C5orf56Q8N8D9 126 aa16.82■□□□□ 0.28
SPHK1-202ENST00000392496 MOB4Q9Y3A3 225 aa16.82■□□□□ 0.28
SPHK1-202ENST00000392496 ATP5G3P48201 142 aa16.82■□□□□ 0.28
SPHK1-202ENST00000392496 ZNF503Q96F45 646 aa16.82■□□□□ 0.28
SPHK1-202ENST00000392496 THYN1Q9P016 225 aa16.82■□□□□ 0.28
SPHK1-202ENST00000392496 DOK5Q9P104 306 aa16.82■□□□□ 0.28
SPHK1-202ENST00000392496 NAV2Q8IVL1 2488 aa16.81■□□□□ 0.28
SPHK1-202ENST00000392496 TSPAN4O14817 238 aa16.81■□□□□ 0.28
SPHK1-202ENST00000392496 AVPP01185 164 aa16.81■□□□□ 0.28
SPHK1-202ENST00000392496 FAM167A-AS1Q96KT0 104 aa16.81■□□□□ 0.28
SPHK1-202ENST00000392496 TMEM68Q96MH6 324 aa16.81■□□□□ 0.28
SPHK1-202ENST00000392496 SSX3Q99909 188 aa16.81■□□□□ 0.28
SPHK1-202ENST00000392496 SMIM7Q9BQ49 75 aa16.81■□□□□ 0.28
SPHK1-202ENST00000392496 SDF2L1Q9HCN8 221 aa16.81■□□□□ 0.28
SPHK1-202ENST00000392496 OR7C2O60412 319 aa16.8■□□□□ 0.28
SPHK1-202ENST00000392496 FABP1P07148 127 aa16.8■□□□□ 0.28
SPHK1-202ENST00000392496 AKR1C3P42330 323 aa16.8■□□□□ 0.28
SPHK1-202ENST00000392496 KLK9Q2XQG4 91 aa16.8■□□□□ 0.28
SPHK1-202ENST00000392496 Q5PR19 223 aa16.8■□□□□ 0.28
SPHK1-202ENST00000392496 FAM110DQ8TAY7 271 aaPredicted RBP16.8■□□□□ 0.28
SPHK1-202ENST00000392496 ZNF48Q96MX3 618 aaPredicted RBP16.8■□□□□ 0.28
SPHK1-202ENST00000392496 SLC25A2Q9BXI2 301 aa16.8■□□□□ 0.28
SPHK1-202ENST00000392496 PARLQ9H300 379 aa16.8■□□□□ 0.28
SPHK1-202ENST00000392496 GSX1Q9H4S2 264 aaPredicted RBP16.8■□□□□ 0.28
SPHK1-202ENST00000392496 TUBA4BQ9H853 241 aa16.8■□□□□ 0.28
SPHK1-202ENST00000392496 NAT8Q9UHE5 227 aa16.8■□□□□ 0.28
SPHK1-202ENST00000392496 KLK9Q9UKQ9 250 aa16.8■□□□□ 0.28
SPHK1-202ENST00000392496 YTHDF2Q9Y5A9 579 aaKnown RBP16.8■□□□□ 0.28
SPHK1-202ENST00000392496 B4DEV8 164 aa16.79■□□□□ 0.28
SPHK1-202ENST00000392496 RNF223E7ERA6 249 aa16.79■□□□□ 0.28
SPHK1-202ENST00000392496 OR5T1Q8NG75 326 aa16.79■□□□□ 0.28
SPHK1-202ENST00000392496 RPUSD4Q96CM3 377 aaKnown RBP16.79■□□□□ 0.28
SPHK1-202ENST00000392496 ZNF355PQ9NSJ1 428 aa16.79■□□□□ 0.28
SPHK1-202ENST00000392496 NBPF19A0A087WUL8 3843 aa16.79■□□□□ 0.28
SPHK1-202ENST00000392496 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.79■□□□□ 0.288e-14■■□□□ 14.4
SPHK1-202ENST00000392496 A0A087WWC5 75 aa16.79■□□□□ 0.28
SPHK1-202ENST00000392496 ATP6V0E1O15342 81 aa16.79■□□□□ 0.28
SPHK1-202ENST00000392496 HIST1H1BP16401 226 aaKnown RBP16.79■□□□□ 0.28
SPHK1-202ENST00000392496 TIGITQ495A1 244 aa16.79■□□□□ 0.28
SPHK1-202ENST00000392496 MORN5Q5VZ52 161 aa16.79■□□□□ 0.28
SPHK1-202ENST00000392496 PRSS57Q6UWY2 283 aa16.79■□□□□ 0.28
SPHK1-202ENST00000392496 TRAV30A0A087WSZ9 112 aa16.78■□□□□ 0.28
SPHK1-202ENST00000392496 HYPMO75409 117 aa16.78■□□□□ 0.28
SPHK1-202ENST00000392496 IGKV1-17P01599 117 aa16.78■□□□□ 0.28
SPHK1-202ENST00000392496 ORM2P19652 201 aa16.78■□□□□ 0.28
SPHK1-202ENST00000392496 MFAP4P55083 255 aa16.78■□□□□ 0.28
SPHK1-202ENST00000392496 TMEM241Q24JQ0 296 aa16.78■□□□□ 0.28
SPHK1-202ENST00000392496 UNQ5815/PRO19632Q6UWF5 114 aa16.78■□□□□ 0.28
SPHK1-202ENST00000392496 LINC00305Q7Z4B0 112 aa16.78■□□□□ 0.28
SPHK1-202ENST00000392496 TMEM219Q86XT9 240 aa16.78■□□□□ 0.28
SPHK1-202ENST00000392496 OR5AU1Q8NGC0 362 aa16.78■□□□□ 0.28
SPHK1-202ENST00000392496 OR1B1Q8NGR6 318 aa16.78■□□□□ 0.28
SPHK1-202ENST00000392496 TRAV5A0A0B4J249 113 aa16.77■□□□□ 0.28
SPHK1-202ENST00000392496 TGFAP01135 160 aa16.77■□□□□ 0.28
SPHK1-202ENST00000392496 PSG1P11464 419 aa16.77■□□□□ 0.28
SPHK1-202ENST00000392496 NPPCP23582 126 aa16.77■□□□□ 0.28
SPHK1-202ENST00000392496 KIAA0141Q14154 515 aaPredicted RBP16.77■□□□□ 0.28
SPHK1-202ENST00000392496 ZNF674Q2M3X9 581 aa16.77■□□□□ 0.28
SPHK1-202ENST00000392496 POLQO75417 2590 aa16.77■□□□□ 0.28
SPHK1-202ENST00000392496 VPS13CQ709C8 3753 aa16.77■□□□□ 0.27
SPHK1-202ENST00000392496 A6NDX4 124 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms