RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 AKAIN1P0CW23 69 aa12.09□□□□□ -0.47
PTPRK-208ENST00000392449 HTR2BP41595 481 aa12.09□□□□□ -0.47
PTPRK-208ENST00000392449 MRPS10P82664 201 aaKnown RBP12.09□□□□□ -0.47
PTPRK-208ENST00000392449 FAM219AQ8IW50 185 aa12.09□□□□□ -0.47
PTPRK-208ENST00000392449 STHQ8IWL8 128 aa12.09□□□□□ -0.47
PTPRK-208ENST00000392449 OR52E5Q8NH55 327 aa12.09□□□□□ -0.47
PTPRK-208ENST00000392449 C11orf45Q8TAV5 145 aa12.09□□□□□ -0.47
PTPRK-208ENST00000392449 TMEM231Q9H6L2 316 aa12.09□□□□□ -0.47
PTPRK-208ENST00000392449 C4BPBP20851 252 aa12.08□□□□□ -0.47
PTPRK-208ENST00000392449 TMEM187Q14656 261 aa12.08□□□□□ -0.47
PTPRK-208ENST00000392449 SURF2Q15527 256 aaPredicted RBP12.08□□□□□ -0.47
PTPRK-208ENST00000392449 C2orf83Q53S99 150 aa12.08□□□□□ -0.47
PTPRK-208ENST00000392449 SLC24A4Q8NFF2 622 aa12.08□□□□□ -0.47
PTPRK-208ENST00000392449 DYNC2LI1Q8TCX1 351 aa12.08□□□□□ -0.47
PTPRK-208ENST00000392449 DCANP1Q8TF63 244 aa12.08□□□□□ -0.47
PTPRK-208ENST00000392449 C11orf68Q9H3H3 251 aaKnown RBP12.08□□□□□ -0.47
PTPRK-208ENST00000392449 A0A1W2PS18 150 aa12.08□□□□□ -0.48
PTPRK-208ENST00000392449 OR10J1P30954 320 aa12.08□□□□□ -0.48
PTPRK-208ENST00000392449 DHODHQ02127 395 aa12.08□□□□□ -0.48
PTPRK-208ENST00000392449 USF2Q15853 346 aaPredicted RBP12.08□□□□□ -0.48
PTPRK-208ENST00000392449 TRPT1Q86TN4 253 aaKnown RBP12.08□□□□□ -0.48
PTPRK-208ENST00000392449 RPS10-NUDT3A0A1W2PQS6 291 aa12.07□□□□□ -0.48
PTPRK-208ENST00000392449 ANKRD20A5PA0PJZ0 165 aa12.07□□□□□ -0.48
PTPRK-208ENST00000392449 CTDSPLO15194 276 aa12.07□□□□□ -0.48
PTPRK-208ENST00000392449 ACTL10Q5JWF8 245 aa12.07□□□□□ -0.48
PTPRK-208ENST00000392449 Q8NAQ8 132 aa12.07□□□□□ -0.48
PTPRK-208ENST00000392449 OR1S2Q8NGQ3 325 aa12.07□□□□□ -0.48
PTPRK-208ENST00000392449 NPIPB3Q92617 1050 aa12.07□□□□□ -0.48
PTPRK-208ENST00000392449 ACY3Q96HD9 319 aa12.07□□□□□ -0.48
PTPRK-208ENST00000392449 CLEC5AQ9NY25 188 aa12.07□□□□□ -0.48
PTPRK-208ENST00000392449 CCDC59Q9P031 241 aaKnown RBP12.07□□□□□ -0.48
PTPRK-208ENST00000392449 TMEM56-RWDD3S4R434 201 aa12.07□□□□□ -0.48
PTPRK-208ENST00000392449 U3KQE9 123 aa12.07□□□□□ -0.48
PTPRK-208ENST00000392449 TRAV30A0A087WSZ9 112 aa12.06□□□□□ -0.48
PTPRK-208ENST00000392449 NPY1RP25929 384 aa12.06□□□□□ -0.48
PTPRK-208ENST00000392449 GLMPQ8WWB7 406 aa12.06□□□□□ -0.48
PTPRK-208ENST00000392449 PRRT1Q99946 306 aa12.06□□□□□ -0.48
PTPRK-208ENST00000392449 SCGB2A1O75556 95 aa12.05□□□□□ -0.48
PTPRK-208ENST00000392449 IL4P05112 153 aa12.05□□□□□ -0.48
PTPRK-208ENST00000392449 HNRNPCP07910 306 aaKnown RBP eCLIP12.05□□□□□ -0.482e-7■■□□□ 11.7
PTPRK-208ENST00000392449 RBMY1A1P0DJD3 496 aaKnown RBP12.05□□□□□ -0.48
PTPRK-208ENST00000392449 RBMY1CP0DJD4 496 aa12.05□□□□□ -0.48
PTPRK-208ENST00000392449 SULT1A3P0DMM9 295 aa12.05□□□□□ -0.48
PTPRK-208ENST00000392449 SULT1A4P0DMN0 295 aa12.05□□□□□ -0.48
PTPRK-208ENST00000392449 AKR1C4P17516 323 aa12.05□□□□□ -0.48
PTPRK-208ENST00000392449 SUPT4H1P63272 117 aaKnown RBP12.05□□□□□ -0.48
PTPRK-208ENST00000392449 DHRS2Q13268 280 aa12.05□□□□□ -0.48
PTPRK-208ENST00000392449 RBMY1FQ15415 496 aaKnown RBP12.05□□□□□ -0.48
PTPRK-208ENST00000392449 NMSQ5H8A3 153 aa12.05□□□□□ -0.48
PTPRK-208ENST00000392449 PSMG4Q5JS54 123 aa12.05□□□□□ -0.48
PTPRK-208ENST00000392449 C16orf54Q6UWD8 224 aa12.05□□□□□ -0.48
PTPRK-208ENST00000392449 LYZL2Q7Z4W2 148 aa12.05□□□□□ -0.48
PTPRK-208ENST00000392449 RNASEH2CQ8TDP1 164 aaKnown RBP12.05□□□□□ -0.48
PTPRK-208ENST00000392449 Q8WTZ3 238 aa12.05□□□□□ -0.48
PTPRK-208ENST00000392449 RAB2BQ8WUD1 216 aa12.05□□□□□ -0.48
PTPRK-208ENST00000392449 GRAMD2BQ96HH9 432 aa12.05□□□□□ -0.48
PTPRK-208ENST00000392449 NARS2Q96I59 477 aaKnown RBP12.05□□□□□ -0.48
PTPRK-208ENST00000392449 MCUBQ9NWR8 336 aa12.05□□□□□ -0.48
PTPRK-208ENST00000392449 VPS13DQ5THJ4 4388 aa12.04□□□□□ -0.48
PTPRK-208ENST00000392449 IGHV4-28A0A0C4DH34 117 aa12.04□□□□□ -0.48
PTPRK-208ENST00000392449 GSTZ1O43708 216 aaPredicted RBP12.04□□□□□ -0.48
PTPRK-208ENST00000392449 SLC25A4P12235 298 aa12.04□□□□□ -0.48
PTPRK-208ENST00000392449 YPEL3P61236 119 aaPredicted RBP12.04□□□□□ -0.48
PTPRK-208ENST00000392449 GSG1LQ6UXU4 331 aa12.04□□□□□ -0.48
PTPRK-208ENST00000392449 SLIRPQ9GZT3 109 aaKnown RBP12.04□□□□□ -0.48
PTPRK-208ENST00000392449 IFNA10P01566 189 aa12.03□□□□□ -0.48
PTPRK-208ENST00000392449 PRR20EP86478 221 aa12.03□□□□□ -0.48
PTPRK-208ENST00000392449 PRR20CP86479 221 aa12.03□□□□□ -0.48
PTPRK-208ENST00000392449 PRR20DP86480 221 aa12.03□□□□□ -0.48
PTPRK-208ENST00000392449 PRR20BP86481 221 aa12.03□□□□□ -0.48
PTPRK-208ENST00000392449 PRR20AP86496 221 aa12.03□□□□□ -0.48
PTPRK-208ENST00000392449 MFFQ9GZY8 342 aa12.03□□□□□ -0.48
PTPRK-208ENST00000392449 RBKSQ9H477 322 aa12.03□□□□□ -0.48
PTPRK-208ENST00000392449 DNAH10Q8IVF4 4471 aa12.03□□□□□ -0.48
PTPRK-208ENST00000392449 H3BMQ9 156 aa12.02□□□□□ -0.48
PTPRK-208ENST00000392449 IFNA4P05014 189 aa12.02□□□□□ -0.48
PTPRK-208ENST00000392449 TNFSF8P32971 234 aa12.02□□□□□ -0.48
PTPRK-208ENST00000392449 TMBIM6P55061 237 aa12.02□□□□□ -0.48
PTPRK-208ENST00000392449 LGALS9CQ6DKI2 356 aa12.02□□□□□ -0.48
PTPRK-208ENST00000392449 IL22RA2Q969J5 263 aa12.02□□□□□ -0.48
PTPRK-208ENST00000392449 RAB40CQ96S21 281 aa12.02□□□□□ -0.48
PTPRK-208ENST00000392449 HSPB7Q9UBY9 170 aa12.02□□□□□ -0.48
PTPRK-208ENST00000392449 SCP2D1Q9UJQ7 156 aa12.02□□□□□ -0.48
PTPRK-208ENST00000392449 X6R8D5 127 aa12.02□□□□□ -0.48
PTPRK-208ENST00000392449 HELTA6NFD8 242 aa12.02□□□□□ -0.49
PTPRK-208ENST00000392449 FAM90A26D6RGX4 464 aa12.02□□□□□ -0.49
PTPRK-208ENST00000392449 TOMM40O96008 361 aa12.02□□□□□ -0.49
PTPRK-208ENST00000392449 RD3LP0DJH9 198 aa12.02□□□□□ -0.49
PTPRK-208ENST00000392449 SPP1P10451 314 aa12.02□□□□□ -0.49
PTPRK-208ENST00000392449 PSG1P11464 419 aa12.02□□□□□ -0.49
PTPRK-208ENST00000392449 DEFB1P60022 68 aa12.02□□□□□ -0.49
PTPRK-208ENST00000392449 SMCO1Q147U7 214 aa12.02□□□□□ -0.49
PTPRK-208ENST00000392449 OR51G1Q8NGK1 321 aa12.02□□□□□ -0.49
PTPRK-208ENST00000392449 DTD1Q8TEA8 209 aa12.02□□□□□ -0.49
PTPRK-208ENST00000392449 SOSTQ9BQB4 213 aa12.02□□□□□ -0.49
PTPRK-208ENST00000392449 KCNIP3Q9Y2W7 256 aa12.02□□□□□ -0.49
PTPRK-208ENST00000392449 ELOA3CA0A087WX78 387 aaPredicted RBP12.01□□□□□ -0.49
PTPRK-208ENST00000392449 A0A0B4J2A0 478 aa12.01□□□□□ -0.49
PTPRK-208ENST00000392449 ETFRF1Q6IPR1 90 aa12.01□□□□□ -0.49
PTPRK-208ENST00000392449 MORN3Q6PF18 240 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms