RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 GSX1Q9H4S2 264 aaPredicted RBP14.6□□□□□ -0.07
ERCC2-201ENST00000391941 BSNQ9UPA5 3926 aa14.6□□□□□ -0.07
ERCC2-201ENST00000391941 HLA-DQA1P01909 254 aa14.59□□□□□ -0.07
ERCC2-201ENST00000391941 MRPL20Q9BYC9 149 aaKnown RBP14.59□□□□□ -0.07
ERCC2-201ENST00000391941 RAI1Q7Z5J4 1906 aaPredicted RBP14.59□□□□□ -0.07
ERCC2-201ENST00000391941 DSCAML1Q8TD84 2053 aa14.59□□□□□ -0.07
ERCC2-201ENST00000391941 ORM2P19652 201 aa14.59□□□□□ -0.07
ERCC2-201ENST00000391941 PRCDQ00LT1 54 aa14.59□□□□□ -0.07
ERCC2-201ENST00000391941 PATE2Q6UY27 113 aa14.59□□□□□ -0.07
ERCC2-201ENST00000391941 TPSG1Q9NRR2 321 aa14.59□□□□□ -0.07
ERCC2-201ENST00000391941 TNFRSF19Q9NS68 423 aa14.59□□□□□ -0.07
ERCC2-201ENST00000391941 TTC28Q96AY4 2481 aa14.59□□□□□ -0.07
ERCC2-201ENST00000391941 IGHV3-72A0A0B4J1Y9 119 aa14.59□□□□□ -0.07
ERCC2-201ENST00000391941 IZUMO1RA6ND01 250 aa14.59□□□□□ -0.07
ERCC2-201ENST00000391941 UPK2O00526 184 aa14.59□□□□□ -0.07
ERCC2-201ENST00000391941 CEACAM8P31997 349 aaPredicted RBP14.59□□□□□ -0.07
ERCC2-201ENST00000391941 MZT1Q08AG7 82 aa14.59□□□□□ -0.07
ERCC2-201ENST00000391941 PRNDQ9UKY0 176 aa14.59□□□□□ -0.07
ERCC2-201ENST00000391941 C1orf162Q8NEQ5 155 aaPredicted RBP14.58□□□□□ -0.08
ERCC2-201ENST00000391941 URB1-AS1Q96HZ7 61 aa14.58□□□□□ -0.08
ERCC2-201ENST00000391941 FNDC10F2Z333 226 aa14.58□□□□□ -0.08
ERCC2-201ENST00000391941 CRYABP02511 175 aaKnown RBP14.58□□□□□ -0.08
ERCC2-201ENST00000391941 CD59P13987 128 aa14.58□□□□□ -0.08
ERCC2-201ENST00000391941 TAS2R45P59539 299 aa14.58□□□□□ -0.08
ERCC2-201ENST00000391941 CCL8P80075 99 aa14.58□□□□□ -0.08
ERCC2-201ENST00000391941 FOXE3Q13461 319 aa14.58□□□□□ -0.08
ERCC2-201ENST00000391941 RNF151Q2KHN1 245 aa14.58□□□□□ -0.08
ERCC2-201ENST00000391941 RITA1Q96K30 269 aa14.58□□□□□ -0.08
ERCC2-201ENST00000391941 HCP5Q6MZN7 132 aa14.57□□□□□ -0.08
ERCC2-201ENST00000391941 HARBI1Q96MB7 349 aa14.57□□□□□ -0.08
ERCC2-201ENST00000391941 A0A1W2PRE2 83 aa14.57□□□□□ -0.08
ERCC2-201ENST00000391941 SNAI2O43623 268 aa14.57□□□□□ -0.08
ERCC2-201ENST00000391941 IGHG3P01860 377 aa14.57□□□□□ -0.08
ERCC2-201ENST00000391941 ZNF883P0CG24 379 aa14.57□□□□□ -0.08
ERCC2-201ENST00000391941 COX19Q49B96 90 aa14.57□□□□□ -0.08
ERCC2-201ENST00000391941 TMEM265A0A087WTH1 108 aa14.56□□□□□ -0.08
ERCC2-201ENST00000391941 TRAV8-1A0A0A6YYK1 113 aa14.56□□□□□ -0.08
ERCC2-201ENST00000391941 COX7A2P2O60397 106 aa14.56□□□□□ -0.08
ERCC2-201ENST00000391941 WT1-ASQ06250 92 aa14.56□□□□□ -0.08
ERCC2-201ENST00000391941 BHLHA15Q7RTS1 189 aaPredicted RBP14.56□□□□□ -0.08
ERCC2-201ENST00000391941 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.56□□□□□ -0.08
ERCC2-201ENST00000391941 ZNF71Q9NQZ8 489 aaPredicted RBP14.56□□□□□ -0.08
ERCC2-201ENST00000391941 LOC102724200A0A096LPH7 203 aaPredicted RBP14.56□□□□□ -0.08
ERCC2-201ENST00000391941 CFHR2P36980 270 aa14.56□□□□□ -0.08
ERCC2-201ENST00000391941 CA7P43166 264 aa14.56□□□□□ -0.08
ERCC2-201ENST00000391941 CD69Q07108 199 aa14.56□□□□□ -0.08
ERCC2-201ENST00000391941 ZNF329Q86UD4 541 aa14.56□□□□□ -0.08
ERCC2-201ENST00000391941 PAXXQ9BUH6 204 aa14.56□□□□□ -0.08
ERCC2-201ENST00000391941 CBY1Q9Y3M2 126 aa14.56□□□□□ -0.08
ERCC2-201ENST00000391941 POU2AF1Q16633 256 aa14.56□□□□□ -0.08
ERCC2-201ENST00000391941 MBD6Q96DN6 1003 aa14.56□□□□□ -0.08
ERCC2-201ENST00000391941 PGLYRP4Q96LB8 373 aa14.56□□□□□ -0.08
ERCC2-201ENST00000391941 DKK4Q9UBT3 224 aa14.56□□□□□ -0.08
ERCC2-201ENST00000391941 PEX7O00628 323 aa14.55□□□□□ -0.08
ERCC2-201ENST00000391941 CDX4O14627 284 aaPredicted RBP14.55□□□□□ -0.08
ERCC2-201ENST00000391941 ITGB1BP1O14713 200 aa14.55□□□□□ -0.08
ERCC2-201ENST00000391941 LHBP01229 141 aa14.55□□□□□ -0.08
ERCC2-201ENST00000391941 SELENOVP59797 346 aa14.55□□□□□ -0.08
ERCC2-201ENST00000391941 TBR1Q16650 682 aa14.55□□□□□ -0.08
ERCC2-201ENST00000391941 SEM1Q6ZVN7 128 aa14.55□□□□□ -0.08
ERCC2-201ENST00000391941 ALKBH7Q9BT30 221 aaPredicted RBP14.55□□□□□ -0.08
ERCC2-201ENST00000391941 COMMD5Q9GZQ3 224 aa14.55□□□□□ -0.08
ERCC2-201ENST00000391941 ZNF257Q9Y2Q1 563 aa14.55□□□□□ -0.08
ERCC2-201ENST00000391941 PSMB11A5LHX3 300 aa14.55□□□□□ -0.08
ERCC2-201ENST00000391941 CSN3P07498 182 aa14.55□□□□□ -0.08
ERCC2-201ENST00000391941 ADTRPQ96IZ2 230 aa14.55□□□□□ -0.08
ERCC2-201ENST00000391941 C2orf70A6NJV1 201 aa14.54□□□□□ -0.08
ERCC2-201ENST00000391941 C2orf83Q53S99 150 aa14.54□□□□□ -0.08
ERCC2-201ENST00000391941 MPV17L2Q567V2 206 aa14.54□□□□□ -0.08
ERCC2-201ENST00000391941 OR1B1Q8NGR6 318 aa14.54□□□□□ -0.08
ERCC2-201ENST00000391941 GAFA1Q96PS6 74 aa14.54□□□□□ -0.08
ERCC2-201ENST00000391941 KLF3P57682 345 aaPredicted RBP14.54□□□□□ -0.08
ERCC2-201ENST00000391941 UBE2G1P62253 170 aa14.54□□□□□ -0.08
ERCC2-201ENST00000391941 C10orf113Q5VZT2 155 aa14.54□□□□□ -0.08
ERCC2-201ENST00000391941 LINC00305Q7Z4B0 112 aa14.54□□□□□ -0.08
ERCC2-201ENST00000391941 OR4F17Q8NGA8 305 aa14.54□□□□□ -0.08
ERCC2-201ENST00000391941 PLSCR4Q9NRQ2 329 aa14.54□□□□□ -0.08
ERCC2-201ENST00000391941 SLC25A15Q9Y619 301 aa14.54□□□□□ -0.08
ERCC2-201ENST00000391941 LOC105371242A0A075B767 164 aa14.53□□□□□ -0.08
ERCC2-201ENST00000391941 PRO3102Q9H379 93 aa14.53□□□□□ -0.08
ERCC2-201ENST00000391941 C19orf67A6NJJ6 358 aa14.53□□□□□ -0.08
ERCC2-201ENST00000391941 CGB1A6NKQ9 187 aa14.53□□□□□ -0.08
ERCC2-201ENST00000391941 PRR33A8MZF0 331 aa14.53□□□□□ -0.08
ERCC2-201ENST00000391941 SLC25A5P05141 298 aaKnown RBP14.53□□□□□ -0.08
ERCC2-201ENST00000391941 OR5B3Q8NH48 314 aa14.53□□□□□ -0.08
ERCC2-201ENST00000391941 C19orf24Q9BVV8 132 aa14.53□□□□□ -0.08
ERCC2-201ENST00000391941 ASCL3Q9NQ33 180 aa14.53□□□□□ -0.08
ERCC2-201ENST00000391941 PROCRQ9UNN8 238 aa14.53□□□□□ -0.08
ERCC2-201ENST00000391941 PGPA6NDG6 321 aa14.52□□□□□ -0.08
ERCC2-201ENST00000391941 FCN3O75636 299 aa14.52□□□□□ -0.08
ERCC2-201ENST00000391941 RTL8BQ17RB0 113 aa14.52□□□□□ -0.08
ERCC2-201ENST00000391941 CLEC2AQ6UVW9 174 aa14.52□□□□□ -0.08
ERCC2-201ENST00000391941 PNKDQ8N490 385 aa14.52□□□□□ -0.08
ERCC2-201ENST00000391941 GTSF1Q8WW33 167 aa14.52□□□□□ -0.08
ERCC2-201ENST00000391941 IGFBPL1Q8WX77 278 aa14.52□□□□□ -0.08
ERCC2-201ENST00000391941 SAP30LQ9HAJ7 183 aa14.52□□□□□ -0.08
ERCC2-201ENST00000391941 ANKRD11Q6UB99 2663 aaPredicted RBP14.52□□□□□ -0.08
ERCC2-201ENST00000391941 ZNF474Q6S9Z5 364 aaPredicted RBP14.52□□□□□ -0.09
ERCC2-201ENST00000391941 FXYD5Q96DB9 178 aa14.52□□□□□ -0.09
ERCC2-201ENST00000391941 COX11Q9Y6N1 276 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms