RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 YPEL3P61236 119 aaPredicted RBP0.15□□□□□ -2.39
SNORA40.4-201ENST00000390971 CIRBPQ14011 172 aaKnown RBP0.15□□□□□ -2.39
SNORA40.4-201ENST00000390971 ESRGQ1W209 222 aa0.15□□□□□ -2.39
SNORA40.4-201ENST00000390971 BRMS1LQ5PSV4 323 aa0.15□□□□□ -2.39
SNORA40.4-201ENST00000390971 CFAP53Q96M91 514 aa0.15□□□□□ -2.39
SNORA40.4-201ENST00000390971 PRRT1Q99946 306 aa0.15□□□□□ -2.39
SNORA40.4-201ENST00000390971 C20orf27Q9GZN8 174 aa0.15□□□□□ -2.39
SNORA40.4-201ENST00000390971 C6orf62Q9GZU0 229 aaPredicted RBP0.15□□□□□ -2.39
SNORA40.4-201ENST00000390971 DCSTAMPQ9H295 470 aa0.15□□□□□ -2.39
SNORA40.4-201ENST00000390971 SBF1O95248 1867 aa0.14□□□□□ -2.39
SNORA40.4-201ENST00000390971 TGOLN2O43493 480 aa0.14□□□□□ -2.39
SNORA40.4-201ENST00000390971 CRYZL1O95825 349 aa0.14□□□□□ -2.39
SNORA40.4-201ENST00000390971 OR4E1P0C645 316 aa0.14□□□□□ -2.39
SNORA40.4-201ENST00000390971 RPS20P60866 119 aaKnown RBP0.14□□□□□ -2.39
SNORA40.4-201ENST00000390971 OR2F1Q13607 317 aa0.14□□□□□ -2.39
SNORA40.4-201ENST00000390971 PPP1R2P1Q96PQ5 205 aa0.14□□□□□ -2.39
SNORA40.4-201ENST00000390971 TLNRD1Q9H1K6 362 aa0.14□□□□□ -2.39
SNORA40.4-201ENST00000390971 C14orf132Q9NPU4 83 aa0.14□□□□□ -2.39
SNORA40.4-201ENST00000390971 ATP6V1DQ9Y5K8 247 aa0.14□□□□□ -2.39
SNORA40.4-201ENST00000390971 SCN3AQ9NY46 2000 aa0.13□□□□□ -2.39
SNORA40.4-201ENST00000390971 CCL16O15467 120 aa0.13□□□□□ -2.39
SNORA40.4-201ENST00000390971 LINC01554Q52M75 96 aa0.13□□□□□ -2.39
SNORA40.4-201ENST00000390971 LINC00575Q6W349 94 aa0.13□□□□□ -2.39
SNORA40.4-201ENST00000390971 OR52R1Q8NGF1 315 aa0.13□□□□□ -2.39
SNORA40.4-201ENST00000390971 PKIGQ9Y2B9 76 aa0.13□□□□□ -2.39
SNORA40.4-201ENST00000390971 NEO1Q92859 1461 aa0.13□□□□□ -2.39
SNORA40.4-201ENST00000390971 ASCC3Q8N3C0 2202 aaKnown RBP0.13□□□□□ -2.39
SNORA40.4-201ENST00000390971 WRNQ14191 1432 aaPredicted RBP eCLIP0.13□□□□□ -2.39
SNORA40.4-201ENST00000390971 TPM3P06753 285 aa0.12□□□□□ -2.39
SNORA40.4-201ENST00000390971 SMIM10L2AP0DMW4 78 aa0.12□□□□□ -2.39
SNORA40.4-201ENST00000390971 SMIM10L2BP0DMW5 78 aa0.12□□□□□ -2.39
SNORA40.4-201ENST00000390971 SPINK9Q5DT21 86 aa0.12□□□□□ -2.39
SNORA40.4-201ENST00000390971 OR11H6Q8NGC7 330 aa0.12□□□□□ -2.39
SNORA40.4-201ENST00000390971 ECM29Q5VYK3 1845 aa0.12□□□□□ -2.39
SNORA40.4-201ENST00000390971 KMT2DO14686 5537 aa0.12□□□□□ -2.39
SNORA40.4-201ENST00000390971 DOCK3Q8IZD9 2030 aa0.11□□□□□ -2.39
SNORA40.4-201ENST00000390971 TAF1LQ8IZX4 1826 aa0.11□□□□□ -2.39
SNORA40.4-201ENST00000390971 PIRO00625 290 aa0.11□□□□□ -2.39
SNORA40.4-201ENST00000390971 HIST1H1EP10412 219 aaKnown RBP0.11□□□□□ -2.39
SNORA40.4-201ENST00000390971 MAGOHP61326 146 aaKnown RBP0.11□□□□□ -2.39
SNORA40.4-201ENST00000390971 TSNQ15631 228 aaKnown RBP0.11□□□□□ -2.39
SNORA40.4-201ENST00000390971 SNAPC4Q5SXM2 1469 aa0.1□□□□□ -2.39
SNORA40.4-201ENST00000390971 A0A0D9SG42 100 aa0.1□□□□□ -2.39
SNORA40.4-201ENST00000390971 TLCD2A6NGC4 264 aa0.1□□□□□ -2.39
SNORA40.4-201ENST00000390971 IGLV3-1P01715 115 aa0.1□□□□□ -2.39
SNORA40.4-201ENST00000390971 RBP1P09455 135 aa0.1□□□□□ -2.39
SNORA40.4-201ENST00000390971 ACOT6Q3I5F7 207 aaPredicted RBP0.1□□□□□ -2.39
SNORA40.4-201ENST00000390971 CYSLTR1Q9Y271 337 aa0.1□□□□□ -2.39
SNORA40.4-201ENST00000390971 MED1Q15648 1581 aaPredicted RBP0.1□□□□□ -2.39
SNORA40.4-201ENST00000390971 HECW1Q76N89 1606 aa0.09□□□□□ -2.39
SNORA40.4-201ENST00000390971 A0A087X0T9 212 aa0.09□□□□□ -2.4
SNORA40.4-201ENST00000390971 TGIF2-C20orf24A0A0A6YYL0 155 aa0.09□□□□□ -2.4
SNORA40.4-201ENST00000390971 KRTAP2-3P0C7H8 128 aa0.09□□□□□ -2.4
SNORA40.4-201ENST00000390971 TPM4P67936 248 aa0.09□□□□□ -2.4
SNORA40.4-201ENST00000390971 C8orf74Q6P047 294 aa0.09□□□□□ -2.4
SNORA40.4-201ENST00000390971 KRT222Q8N1A0 295 aa0.09□□□□□ -2.4
SNORA40.4-201ENST00000390971 HIST1H2BLQ99880 126 aa0.09□□□□□ -2.4
SNORA40.4-201ENST00000390971 KRTAP2-4Q9BYR9 128 aa0.09□□□□□ -2.4
SNORA40.4-201ENST00000390971 KRTAP2-1Q9BYU5 128 aa0.09□□□□□ -2.4
SNORA40.4-201ENST00000390971 MRPL27Q9P0M9 148 aaKnown RBP0.09□□□□□ -2.4
SNORA40.4-201ENST00000390971 GUCA1BQ9UMX6 200 aa0.09□□□□□ -2.4
SNORA40.4-201ENST00000390971 ALPK3Q96L96 1907 aa0.09□□□□□ -2.4
SNORA40.4-201ENST00000390971 DOCK5Q9H7D0 1870 aa0.08□□□□□ -2.4
SNORA40.4-201ENST00000390971 HECW2Q9P2P5 1572 aa0.08□□□□□ -2.4
SNORA40.4-201ENST00000390971 TRAV26-2A0A0B4J265 109 aa0.08□□□□□ -2.4
SNORA40.4-201ENST00000390971 OR4C46A6NHA9 309 aa0.08□□□□□ -2.4
SNORA40.4-201ENST00000390971 NUPR1O60356 82 aa0.08□□□□□ -2.4
SNORA40.4-201ENST00000390971 KLF7O75840 302 aaPredicted RBP0.08□□□□□ -2.4
SNORA40.4-201ENST00000390971 ANP32AP39687 249 aaKnown RBP0.08□□□□□ -2.4
SNORA40.4-201ENST00000390971 SULT1A1P50225 295 aa0.08□□□□□ -2.4
SNORA40.4-201ENST00000390971 DEFA1P59665 94 aa0.08□□□□□ -2.4
SNORA40.4-201ENST00000390971 ST6GALNAC3Q8NDV1 305 aa0.08□□□□□ -2.4
SNORA40.4-201ENST00000390971 OR8D4Q8NGM9 314 aa0.08□□□□□ -2.4
SNORA40.4-201ENST00000390971 OR2T10Q8NGZ9 312 aa0.08□□□□□ -2.4
SNORA40.4-201ENST00000390971 TMEM254Q8TBM7 123 aa0.08□□□□□ -2.4
SNORA40.4-201ENST00000390971 CCDC90BQ9GZT6 254 aa0.08□□□□□ -2.4
SNORA40.4-201ENST00000390971 TNS3Q68CZ2 1445 aa0.07□□□□□ -2.4
SNORA40.4-201ENST00000390971 IGHV1-58A0A0C4DH39 117 aa0.07□□□□□ -2.4
SNORA40.4-201ENST00000390971 ZNF682O95780 498 aa0.07□□□□□ -2.4
SNORA40.4-201ENST00000390971 DHFRP00374 187 aa0.07□□□□□ -2.4
SNORA40.4-201ENST00000390971 CASP1P29466 404 aa0.07□□□□□ -2.4
SNORA40.4-201ENST00000390971 KRTAP26-1Q6PEX3 210 aa0.07□□□□□ -2.4
SNORA40.4-201ENST00000390971 DCUN1D1Q96GG9 259 aa0.07□□□□□ -2.4
SNORA40.4-201ENST00000390971 LLPHQ9BRT6 129 aaKnown RBP0.07□□□□□ -2.4
SNORA40.4-201ENST00000390971 BCL2L10Q9HD36 194 aa0.07□□□□□ -2.4
SNORA40.4-201ENST00000390971 UBAP1Q9NZ09 502 aa0.07□□□□□ -2.4
SNORA40.4-201ENST00000390971 UTP11Q9Y3A2 253 aaKnown RBP0.07□□□□□ -2.4
SNORA40.4-201ENST00000390971 CHCHD2Q9Y6H1 151 aaPredicted RBP0.07□□□□□ -2.4
SNORA40.4-201ENST00000390971 CHP2O43745 196 aa0.06□□□□□ -2.4
SNORA40.4-201ENST00000390971 CCDC122Q5T0U0 273 aa0.06□□□□□ -2.4
SNORA40.4-201ENST00000390971 C14orf105Q9NVL8 296 aa0.06□□□□□ -2.4
SNORA40.4-201ENST00000390971 ORMDL1Q9P0S3 153 aa0.06□□□□□ -2.4
SNORA40.4-201ENST00000390971 IGLV3-32A0A0A0MS00 114 aa0.05□□□□□ -2.4
SNORA40.4-201ENST00000390971 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.05□□□□□ -2.4
SNORA40.4-201ENST00000390971 TNFSF18Q9UNG2 199 aa0.05□□□□□ -2.4
SNORA40.4-201ENST00000390971 ROBO3Q96MS0 1386 aa0.05□□□□□ -2.4
SNORA40.4-201ENST00000390971 KDM6AO15550 1401 aaPredicted RBP0.04□□□□□ -2.4
SNORA40.4-201ENST00000390971 TCRBV4S1A1TA0A5B7 111 aa0.04□□□□□ -2.4
SNORA40.4-201ENST00000390971 IFNA5P01569 189 aa0.04□□□□□ -2.4
SNORA40.4-201ENST00000390971 SPINK7P58062 85 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms