RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 NDUFAF3Q9BU61 184 aa4.9□□□□□ -1.63
RFX3-204ENST00000382004 FOXD3Q9UJU5 478 aaPredicted RBP4.9□□□□□ -1.63
RFX3-204ENST00000382004 CGB3P0DN86 165 aa4.9□□□□□ -1.63
RFX3-204ENST00000382004 TPTE2P1Q5T6R2 138 aa4.9□□□□□ -1.63
RFX3-204ENST00000382004 PVRIGQ6DKI7 326 aa4.9□□□□□ -1.63
RFX3-204ENST00000382004 UBE2E2Q96LR5 201 aa4.9□□□□□ -1.63
RFX3-204ENST00000382004 A0A087X0K7 114 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 TMEM14DPA8MWL7 114 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 C9JAW5 83 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 DTX1Q86Y01 620 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 ZDBF2Q9HCK1 2354 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 FOCADQ5VW36 1801 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 SAA2-SAA4A0A096LPE2 208 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 SAA2P0DJI9 122 aaPredicted RBP4.89□□□□□ -1.63
RFX3-204ENST00000382004 TCTEX1D4Q5JR98 221 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 IGKV1-8A0A0C4DH67 115 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 CGB7P0DN87 165 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 GZMMP51124 257 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 RPL15P61313 204 aaKnown RBP4.89□□□□□ -1.63
RFX3-204ENST00000382004 ACTL10Q5JWF8 245 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 A0A1W2PQF6 199 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 A0A1W2PRE2 83 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 SS18Q15532 418 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 ZNF525Q8N782 197 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 OR10W1Q8NGF6 305 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 PLAC1Q9HBJ0 212 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 CHD3Q12873 2000 aaKnown RBP4.89□□□□□ -1.63
RFX3-204ENST00000382004 hDV102S1A0JD36 115 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 CD160O95971 181 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 PRB1P04280 392 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 WFDC6Q9BQY6 131 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 SPTBN1Q01082 2364 aaKnown RBP4.89□□□□□ -1.63
RFX3-204ENST00000382004 CEP290O15078 2479 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 ITGB4P16144 1822 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 D6R8Y8 96 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 OVOL1O14753 267 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 FAM90A2PQ658T7 463 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 OCC1Q8TAD7 63 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 SIGLEC12Q96PQ1 595 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 MYO7BQ6PIF6 2116 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 TRAV40A0A0B4J280 105 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 UPK2O00526 184 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 TFF1P04155 84 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 CELA3BP08861 270 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 CELA3AP09093 270 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 IFITM2Q01629 132 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 ANXA2RQ3ZCQ2 193 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.89□□□□□ -1.63
RFX3-204ENST00000382004 TMEM144Q7Z5S9 345 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 PRIMA1Q86XR5 153 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 SLC25A45Q8N413 288 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 CARHSP1Q9Y2V2 147 aaKnown RBP4.89□□□□□ -1.63
RFX3-204ENST00000382004 LINC00312Q9Y6C7 94 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 TRAV12-1A0A0B4J245 112 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 IGHV2OR16-5A0A0B4J2B6 119 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 TMEM219Q86XT9 240 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 GNB1LQ9BYB4 327 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 ALPK2Q86TB3 2170 aa4.89□□□□□ -1.63
RFX3-204ENST00000382004 LYNX1G3V0Z9 82 aa4.88□□□□□ -1.63
RFX3-204ENST00000382004 RAMP3O60896 148 aa4.88□□□□□ -1.63
RFX3-204ENST00000382004 CLPSP04118 112 aa4.88□□□□□ -1.63
RFX3-204ENST00000382004 TCRAP04437 139 aa4.88□□□□□ -1.63
RFX3-204ENST00000382004 LYNX1P0DP58 116 aa4.88□□□□□ -1.63
RFX3-204ENST00000382004 GUSBP1Q15486 140 aa4.88□□□□□ -1.63
RFX3-204ENST00000382004 PPP1R32Q7Z5V6 425 aa4.88□□□□□ -1.63
RFX3-204ENST00000382004 SPXQ9BT56 116 aa4.88□□□□□ -1.63
RFX3-204ENST00000382004 LRRK1Q38SD2 2015 aa4.88□□□□□ -1.63
RFX3-204ENST00000382004 A0A0G2JK05 382 aa4.88□□□□□ -1.63
RFX3-204ENST00000382004 OSTCQ9NRP0 149 aa4.88□□□□□ -1.63
RFX3-204ENST00000382004 hADV29S1A0JD25 119 aa4.88□□□□□ -1.63
RFX3-204ENST00000382004 PLCH1Q4KWH8 1693 aa4.88□□□□□ -1.63
RFX3-204ENST00000382004 CSTL1Q9H114 145 aa4.88□□□□□ -1.63
RFX3-204ENST00000382004 SRRM4A7MD48 611 aaKnown RBP4.88□□□□□ -1.63
RFX3-204ENST00000382004 WNT2P09544 360 aa4.88□□□□□ -1.63
RFX3-204ENST00000382004 ATRAIDQ6UW56 229 aa4.88□□□□□ -1.63
RFX3-204ENST00000382004 POLR2AP24928 1970 aaKnown RBP4.88□□□□□ -1.63
RFX3-204ENST00000382004 IGHMP01871 453 aa4.88□□□□□ -1.63
RFX3-204ENST00000382004 RFPL3SP0C7P2 107 aa4.88□□□□□ -1.63
RFX3-204ENST00000382004 ZCCHC24Q8N2G6 241 aaKnown RBP4.88□□□□□ -1.63
RFX3-204ENST00000382004 RTBDNQ9BSG5 229 aaPredicted RBP4.88□□□□□ -1.63
RFX3-204ENST00000382004 ABCA7Q8IZY2 2146 aa4.88□□□□□ -1.63
RFX3-204ENST00000382004 EXOC3-AS1Q8N2X6 119 aa4.88□□□□□ -1.63
RFX3-204ENST00000382004 CTSBP07858 339 aa4.88□□□□□ -1.63
RFX3-204ENST00000382004 HAMPP81172 84 aa4.88□□□□□ -1.63
RFX3-204ENST00000382004 ZNF124Q15973 351 aa4.88□□□□□ -1.63
RFX3-204ENST00000382004 SIGLEC1Q9BZZ2 1709 aa4.88□□□□□ -1.63
RFX3-204ENST00000382004 TRAV41A0A0B4J266 112 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 MYMXA0A1B0GTQ4 84 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 C15orf61A6NNL5 157 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 C17orf100A8MU93 164 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 UCP1P25874 307 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 MESP2Q0VG99 397 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 NKAPP1Q8N9T2 125 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 PMS2P5A8MQ11 134 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 SOCS3O14543 225 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 FCN3O75636 299 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 NDPQ00604 133 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 PSG7Q13046 419 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 ABCA4P78363 2273 aa4.87□□□□□ -1.63
RFX3-204ENST00000382004 OR9G9P0C7N8 305 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms