RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 FOXL2NBQ6ZUU3 175 aa14.18□□□□□ -0.14
SGCB-201ENST00000381431 MDS2Q8NDY4 140 aa14.18□□□□□ -0.14
SGCB-201ENST00000381431 FAM74A4Q5TZK3 123 aa14.18□□□□□ -0.14
SGCB-201ENST00000381431 RPP21Q9H633 154 aaKnown RBP14.18□□□□□ -0.14
SGCB-201ENST00000381431 K7ERU9 68 aa14.18□□□□□ -0.14
SGCB-201ENST00000381431 APOHP02749 345 aaPredicted RBP14.18□□□□□ -0.14
SGCB-201ENST00000381431 HIST1H1AQ02539 215 aaPredicted RBP14.18□□□□□ -0.14
SGCB-201ENST00000381431 RPS20P60866 119 aaKnown RBP14.17□□□□□ -0.14
SGCB-201ENST00000381431 TRAV1-1A0A0B4J248 108 aa14.17□□□□□ -0.14
SGCB-201ENST00000381431 TRGV3P03979 118 aa14.17□□□□□ -0.14
SGCB-201ENST00000381431 STAG3L2P0CL84 134 aa14.17□□□□□ -0.14
SGCB-201ENST00000381431 STAG3L3P0CL85 134 aa14.17□□□□□ -0.14
SGCB-201ENST00000381431 RSPO1Q2MKA7 263 aaPredicted RBP14.17□□□□□ -0.14
SGCB-201ENST00000381431 M0R381 172 aa14.17□□□□□ -0.14
SGCB-201ENST00000381431 CFPP27918 469 aa14.17□□□□□ -0.14
SGCB-201ENST00000381431 IGHV3OR16-12A0A075B7B8 117 aa14.16□□□□□ -0.14
SGCB-201ENST00000381431 A0A1W2PRE2 83 aa14.16□□□□□ -0.14
SGCB-201ENST00000381431 TMEM50AO95807 157 aa14.16□□□□□ -0.14
SGCB-201ENST00000381431 NTF4P34130 210 aa14.16□□□□□ -0.14
SGCB-201ENST00000381431 PROK2Q9HC23 129 aa14.16□□□□□ -0.14
SGCB-201ENST00000381431 H3BVH4 76 aa14.16□□□□□ -0.14
SGCB-201ENST00000381431 LYRM7Q5U5X0 104 aa14.16□□□□□ -0.14
SGCB-201ENST00000381431 ASCL4Q6XD76 172 aa14.16□□□□□ -0.14
SGCB-201ENST00000381431 LINC01551Q86U37 167 aa14.16□□□□□ -0.14
SGCB-201ENST00000381431 HIST3H2BBQ8N257 126 aa14.16□□□□□ -0.14
SGCB-201ENST00000381431 PRELID3AQ96N28 172 aa14.16□□□□□ -0.14
SGCB-201ENST00000381431 AGMATQ9BSE5 352 aa14.16□□□□□ -0.14
SGCB-201ENST00000381431 LOC107984156A0A0G2JMH3 177 aa14.16□□□□□ -0.14
SGCB-201ENST00000381431 ETV2O00321 342 aaPredicted RBP14.16□□□□□ -0.14
SGCB-201ENST00000381431 ARL17AQ8IVW1 177 aa14.16□□□□□ -0.14
SGCB-201ENST00000381431 ARL6IP6Q8N6S5 226 aa14.16□□□□□ -0.14
SGCB-201ENST00000381431 ARPC1AQ92747 370 aa14.16□□□□□ -0.14
SGCB-201ENST00000381431 PRDM13Q9H4Q3 707 aa14.16□□□□□ -0.14
SGCB-201ENST00000381431 H7C2G1 150 aa14.15□□□□□ -0.14
SGCB-201ENST00000381431 DLX6P56179 175 aa14.15□□□□□ -0.14
SGCB-201ENST00000381431 SLC25A15Q9Y619 301 aa14.15□□□□□ -0.14
SGCB-201ENST00000381431 IZUMO1RA6ND01 250 aa14.15□□□□□ -0.14
SGCB-201ENST00000381431 FOXH1O75593 365 aa14.15□□□□□ -0.14
SGCB-201ENST00000381431 FAM106AQ4KMX7 169 aa14.15□□□□□ -0.14
SGCB-201ENST00000381431 ZNF585BQ52M93 769 aa14.15□□□□□ -0.14
SGCB-201ENST00000381431 FAM53AQ6NSI3 398 aaPredicted RBP14.15□□□□□ -0.14
SGCB-201ENST00000381431 EEF1AKMT3Q96AZ1 226 aa14.15□□□□□ -0.14
SGCB-201ENST00000381431 EPDR1Q9UM22 224 aa14.15□□□□□ -0.14
SGCB-201ENST00000381431 PLXNA4Q9HCM2 1894 aa14.15□□□□□ -0.14
SGCB-201ENST00000381431 LYL1P12980 280 aa14.15□□□□□ -0.14
SGCB-201ENST00000381431 COTL1Q14019 142 aa14.15□□□□□ -0.14
SGCB-201ENST00000381431 TCRBV4S1A1TA0A5B7 111 aa14.14□□□□□ -0.15
SGCB-201ENST00000381431 AMBPP02760 352 aa14.14□□□□□ -0.15
SGCB-201ENST00000381431 CLEC19AQ6UXS0 136 aa14.14□□□□□ -0.15
SGCB-201ENST00000381431 TIMM23O14925 209 aa14.14□□□□□ -0.15
SGCB-201ENST00000381431 JOSD1Q15040 202 aaPredicted RBP14.14□□□□□ -0.15
SGCB-201ENST00000381431 MLANAQ16655 118 aa14.14□□□□□ -0.15
SGCB-201ENST00000381431 TRAV8-6A0A0B4J262 113 aa14.14□□□□□ -0.15
SGCB-201ENST00000381431 WIPF3A6NGB9 483 aa14.14□□□□□ -0.15
SGCB-201ENST00000381431 IGHV3-11P01762 117 aa14.14□□□□□ -0.15
SGCB-201ENST00000381431 PRSS2P07478 247 aa14.14□□□□□ -0.15
SGCB-201ENST00000381431 CD33P20138 364 aa14.14□□□□□ -0.15
SGCB-201ENST00000381431 RAB9AP51151 201 aa14.14□□□□□ -0.15
SGCB-201ENST00000381431 ZNF414Q96IQ9 312 aa14.14□□□□□ -0.15
SGCB-201ENST00000381431 ZNF324O75467 553 aaPredicted RBP14.14□□□□□ -0.15
SGCB-201ENST00000381431 OSTCQ9NRP0 149 aa14.14□□□□□ -0.15
SGCB-201ENST00000381431 IGKV1D-17A0A075B6S4 117 aa14.13□□□□□ -0.15
SGCB-201ENST00000381431 NBR2O15453 112 aa14.13□□□□□ -0.15
SGCB-201ENST00000381431 COLCA1Q6ZS62 124 aa14.13□□□□□ -0.15
SGCB-201ENST00000381431 MGST2Q99735 147 aa14.13□□□□□ -0.15
SGCB-201ENST00000381431 PARD6GQ9BYG4 376 aaPredicted RBP14.13□□□□□ -0.15
SGCB-201ENST00000381431 LY6G6EA0A0G2JKS1 128 aa14.13□□□□□ -0.15
SGCB-201ENST00000381431 PYY3Q5JQD4 70 aa14.13□□□□□ -0.15
SGCB-201ENST00000381431 SPSB3Q6PJ21 355 aa14.13□□□□□ -0.15
SGCB-201ENST00000381431 U3KQA8 63 aa14.13□□□□□ -0.15
SGCB-201ENST00000381431 ERASQ7Z444 233 aa14.13□□□□□ -0.15
SGCB-201ENST00000381431 HIST1H4GQ99525 98 aa14.13□□□□□ -0.15
SGCB-201ENST00000381431 TMEM160Q9NX00 188 aa14.13□□□□□ -0.15
SGCB-201ENST00000381431 TRBV6-6A0A0A6YYG2 114 aa14.12□□□□□ -0.15
SGCB-201ENST00000381431 RNF125Q96EQ8 232 aa14.12□□□□□ -0.15
SGCB-201ENST00000381431 NDUFAF3Q9BU61 184 aa14.12□□□□□ -0.15
SGCB-201ENST00000381431 C15orf62A8K5M9 175 aa14.12□□□□□ -0.15
SGCB-201ENST00000381431 C9JCJ5 164 aa14.12□□□□□ -0.15
SGCB-201ENST00000381431 CSRP1P21291 193 aaKnown RBP14.12□□□□□ -0.15
SGCB-201ENST00000381431 CEP350Q5VT06 3117 aa14.12□□□□□ -0.15
SGCB-201ENST00000381431 TMEM256Q8N2U0 113 aa14.12□□□□□ -0.15
SGCB-201ENST00000381431 PIMREGQ9BSJ6 248 aa14.12□□□□□ -0.15
SGCB-201ENST00000381431 TMEM242Q9NWH2 141 aa14.12□□□□□ -0.15
SGCB-201ENST00000381431 FABP2P12104 132 aa14.12□□□□□ -0.15
SGCB-201ENST00000381431 DENND4CQ5VZ89 1909 aa14.11□□□□□ -0.15
SGCB-201ENST00000381431 DNLZQ5SXM8 178 aa14.11□□□□□ -0.15
SGCB-201ENST00000381431 NCOA6Q14686 2063 aaPredicted RBP14.11□□□□□ -0.15
SGCB-201ENST00000381431 TRAV9-1A0A075B6T8 112 aa14.11□□□□□ -0.15
SGCB-201ENST00000381431 PDLIM4P50479 330 aa14.11□□□□□ -0.15
SGCB-201ENST00000381431 TMEM200BQ69YZ2 307 aa14.11□□□□□ -0.15
SGCB-201ENST00000381431 FMC1Q96HJ9 113 aa14.11□□□□□ -0.15
SGCB-201ENST00000381431 PPIFP30405 207 aaKnown RBP14.11□□□□□ -0.15
SGCB-201ENST00000381431 Q6ZS49 121 aa14.11□□□□□ -0.15
SGCB-201ENST00000381431 KLF17Q5JT82 389 aaPredicted RBP14.1□□□□□ -0.15
SGCB-201ENST00000381431 DDB2Q92466 427 aa14.1□□□□□ -0.15
SGCB-201ENST00000381431 ZNRD1Q9P1U0 126 aa14.1□□□□□ -0.15
SGCB-201ENST00000381431 FAM90A2PQ658T7 463 aa14.1□□□□□ -0.15
SGCB-201ENST00000381431 CIARTQ8N365 385 aaPredicted RBP14.1□□□□□ -0.15
SGCB-201ENST00000381431 NEU4Q8WWR8 484 aaPredicted RBP14.1□□□□□ -0.15
SGCB-201ENST00000381431 LINC00527Q9UJ94 153 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms