RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 MBD6Q96DN6 1003 aa10.13□□□□□ -0.79
PUDP-201ENST00000381077 TMEM14CQ9P0S9 112 aa10.13□□□□□ -0.79
PUDP-201ENST00000381077 RNF24Q9Y225 148 aa10.13□□□□□ -0.79
PUDP-201ENST00000381077 C22orf46C9J442 243 aa10.12□□□□□ -0.79
PUDP-201ENST00000381077 FAM87AP0C7U9 286 aa10.12□□□□□ -0.79
PUDP-201ENST00000381077 HIST1H1EP10412 219 aaKnown RBP10.12□□□□□ -0.79
PUDP-201ENST00000381077 COL8A2P25067 703 aa10.12□□□□□ -0.79
PUDP-201ENST00000381077 CEACAM3P40198 252 aa10.12□□□□□ -0.79
PUDP-201ENST00000381077 SSBP2P81877 361 aaPredicted RBP10.12□□□□□ -0.79
PUDP-201ENST00000381077 BAGE2Q86Y30 109 aa10.12□□□□□ -0.79
PUDP-201ENST00000381077 MISP3Q96FF7 219 aa10.12□□□□□ -0.79
PUDP-201ENST00000381077 GRAMD2BQ96HH9 432 aa10.12□□□□□ -0.79
PUDP-201ENST00000381077 ACACAQ13085 2346 aa10.12□□□□□ -0.79
PUDP-201ENST00000381077 TRAV5A0A0B4J249 113 aa10.12□□□□□ -0.79
PUDP-201ENST00000381077 A8MWP6 167 aa10.12□□□□□ -0.79
PUDP-201ENST00000381077 IER3P46695 156 aa10.12□□□□□ -0.79
PUDP-201ENST00000381077 CT83Q5H943 113 aa10.12□□□□□ -0.79
PUDP-201ENST00000381077 TMEM136Q6ZRR5 245 aa10.12□□□□□ -0.79
PUDP-201ENST00000381077 ATP5L2Q7Z4Y8 100 aa10.12□□□□□ -0.79
PUDP-201ENST00000381077 S100A7AQ86SG5 101 aa10.12□□□□□ -0.79
PUDP-201ENST00000381077 C5orf17Q8NAS9 161 aa10.12□□□□□ -0.79
PUDP-201ENST00000381077 RITA1Q96K30 269 aa10.12□□□□□ -0.79
PUDP-201ENST00000381077 MS4A10Q96PG2 267 aa10.12□□□□□ -0.79
PUDP-201ENST00000381077 RNASE7Q9H1E1 156 aaKnown RBP10.12□□□□□ -0.79
PUDP-201ENST00000381077 CBLN4Q9NTU7 201 aa10.12□□□□□ -0.79
PUDP-201ENST00000381077 EPDR1Q9UM22 224 aa10.12□□□□□ -0.79
PUDP-201ENST00000381077 CFAP47Q6ZTR5 3102 aa10.11□□□□□ -0.79
PUDP-201ENST00000381077 ZNF705GA8MUZ8 300 aaPredicted RBP10.11□□□□□ -0.79
PUDP-201ENST00000381077 PLAUP00749 431 aa10.11□□□□□ -0.79
PUDP-201ENST00000381077 PYYP10082 97 aa10.11□□□□□ -0.79
PUDP-201ENST00000381077 MFAP2P55001 183 aa10.11□□□□□ -0.79
PUDP-201ENST00000381077 C1orf122Q6ZSJ8 110 aa10.11□□□□□ -0.79
PUDP-201ENST00000381077 ZNF664Q8N3J9 261 aa10.11□□□□□ -0.79
PUDP-201ENST00000381077 LINC01560Q8TB33 94 aa10.11□□□□□ -0.79
PUDP-201ENST00000381077 SRSF12Q8WXF0 261 aaKnown RBP10.11□□□□□ -0.79
PUDP-201ENST00000381077 FMC1Q96HJ9 113 aa10.11□□□□□ -0.79
PUDP-201ENST00000381077 C14orf144Q96I85 54 aa10.11□□□□□ -0.79
PUDP-201ENST00000381077 ATG101Q9BSB4 218 aa10.11□□□□□ -0.79
PUDP-201ENST00000381077 MRPL36Q9P0J6 103 aaKnown RBP10.11□□□□□ -0.79
PUDP-201ENST00000381077 ZMAT5Q9UDW3 170 aaKnown RBP10.11□□□□□ -0.79
PUDP-201ENST00000381077 DMXL1Q9Y485 3027 aa10.11□□□□□ -0.79
PUDP-201ENST00000381077 OOSP1A8MZH6 123 aa10.1□□□□□ -0.79
PUDP-201ENST00000381077 CCL21O00585 134 aa10.1□□□□□ -0.79
PUDP-201ENST00000381077 REG1AP05451 166 aa10.1□□□□□ -0.79
PUDP-201ENST00000381077 NBEAP1P0C6P0 100 aa10.1□□□□□ -0.79
PUDP-201ENST00000381077 MGST1P10620 155 aaKnown RBP10.1□□□□□ -0.79
PUDP-201ENST00000381077 HTR1DP28221 377 aa10.1□□□□□ -0.79
PUDP-201ENST00000381077 UBE2G1P62253 170 aa10.1□□□□□ -0.79
PUDP-201ENST00000381077 TPTE2P1Q5T6R2 138 aa10.1□□□□□ -0.79
PUDP-201ENST00000381077 TMEM256Q8N2U0 113 aa10.1□□□□□ -0.79
PUDP-201ENST00000381077 GPR82Q96P67 336 aa10.1□□□□□ -0.79
PUDP-201ENST00000381077 NDUFAF3Q9BU61 184 aa10.1□□□□□ -0.79
PUDP-201ENST00000381077 DPM3Q9P2X0 92 aa10.1□□□□□ -0.79
PUDP-201ENST00000381077 NAT8BQ9UHF3 227 aa10.1□□□□□ -0.79
PUDP-201ENST00000381077 SOX21Q9Y651 276 aaPredicted RBP10.1□□□□□ -0.79
PUDP-201ENST00000381077 DSPP15924 2871 aaKnown RBP10.1□□□□□ -0.79
PUDP-201ENST00000381077 IGHV3-72A0A0B4J1Y9 119 aa10.1□□□□□ -0.79
PUDP-201ENST00000381077 TRBV6-1A0A0K0K1D8 114 aa10.1□□□□□ -0.79
PUDP-201ENST00000381077 NDUFA3O95167 84 aa10.1□□□□□ -0.79
PUDP-201ENST00000381077 GP9P14770 177 aa10.1□□□□□ -0.79
PUDP-201ENST00000381077 BRS3P32247 399 aa10.1□□□□□ -0.79
PUDP-201ENST00000381077 USF2Q15853 346 aaPredicted RBP10.1□□□□□ -0.79
PUDP-201ENST00000381077 RIF1Q5UIP0 2472 aaKnown RBP10.1□□□□□ -0.79
PUDP-201ENST00000381077 HCP5Q6MZN7 132 aa10.1□□□□□ -0.79
PUDP-201ENST00000381077 NPBQ8NG41 125 aa10.1□□□□□ -0.79
PUDP-201ENST00000381077 OR1B1Q8NGR6 318 aa10.1□□□□□ -0.79
PUDP-201ENST00000381077 ZNF331Q9NQX6 463 aaPredicted RBP10.1□□□□□ -0.79
PUDP-201ENST00000381077 ZNF492Q9P255 531 aa10.1□□□□□ -0.79
PUDP-201ENST00000381077 TP53TG3Q9ULZ0 132 aa10.1□□□□□ -0.79
PUDP-201ENST00000381077 HIGD1AQ9Y241 93 aa10.1□□□□□ -0.79
PUDP-201ENST00000381077 FAM90A27PA6NNH2 459 aa10.09□□□□□ -0.79
PUDP-201ENST00000381077 I3L2K1 104 aa10.09□□□□□ -0.79
PUDP-201ENST00000381077 SIAH2O43255 324 aa10.09□□□□□ -0.79
PUDP-201ENST00000381077 TOMM40O96008 361 aa10.09□□□□□ -0.79
PUDP-201ENST00000381077 IGLC1P0CG04 106 aa10.09□□□□□ -0.79
PUDP-201ENST00000381077 ORM2P19652 201 aa10.09□□□□□ -0.79
PUDP-201ENST00000381077 C1orf194Q5T5A4 169 aa10.09□□□□□ -0.79
PUDP-201ENST00000381077 BAGE3Q86Y29 109 aa10.09□□□□□ -0.79
PUDP-201ENST00000381077 KIR3DL3Q8N743 410 aa10.09□□□□□ -0.79
PUDP-201ENST00000381077 TSKUQ8WUA8 353 aa10.09□□□□□ -0.79
PUDP-201ENST00000381077 C7orf69Q9H7B7 122 aa10.09□□□□□ -0.79
PUDP-201ENST00000381077 NAGKQ9UJ70 344 aa10.09□□□□□ -0.79
PUDP-201ENST00000381077 BSNQ9UPA5 3926 aa10.09□□□□□ -0.79
PUDP-201ENST00000381077 FAM231BA6NCW3 169 aa10.09□□□□□ -0.79
PUDP-201ENST00000381077 C11orf71Q6IPW1 123 aa10.09□□□□□ -0.79
PUDP-201ENST00000381077 MRPL52Q86TS9 123 aaKnown RBP10.09□□□□□ -0.79
PUDP-201ENST00000381077 TMEM68Q96MH6 324 aa10.09□□□□□ -0.79
PUDP-201ENST00000381077 ZNF48Q96MX3 618 aaPredicted RBP10.09□□□□□ -0.79
PUDP-201ENST00000381077 MLST8Q9BVC4 326 aa10.09□□□□□ -0.79
PUDP-201ENST00000381077 OTORQ9NRC9 128 aa10.09□□□□□ -0.79
PUDP-201ENST00000381077 MRPL27Q9P0M9 148 aaKnown RBP10.09□□□□□ -0.79
PUDP-201ENST00000381077 GVINP1Q7Z2Y8 2422 aa10.08□□□□□ -0.8
PUDP-201ENST00000381077 KIR2DL5BA0A0G2JN68 375 aa10.08□□□□□ -0.8
PUDP-201ENST00000381077 KIR2DL5BA0A0G2JPC4 375 aa10.08□□□□□ -0.8
PUDP-201ENST00000381077 SERF1AO75920 110 aa10.08□□□□□ -0.8
PUDP-201ENST00000381077 MOSP00540 346 aa10.08□□□□□ -0.8
PUDP-201ENST00000381077 SLC25A5P05141 298 aaKnown RBP10.08□□□□□ -0.8
PUDP-201ENST00000381077 RD3LP0DJH9 198 aa10.08□□□□□ -0.8
PUDP-201ENST00000381077 PRTN3P24158 256 aa10.08□□□□□ -0.8
PUDP-201ENST00000381077 GPR6P46095 362 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms