RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 CST9LQ9H4G1 147 aa11.97□□□□□ -0.49
PRNP-201ENST00000379440 SPTBN1Q01082 2364 aaKnown RBP11.97□□□□□ -0.49
PRNP-201ENST00000379440 ACTL6BO94805 426 aa11.96□□□□□ -0.49
PRNP-201ENST00000379440 IL3RAP26951 378 aa11.96□□□□□ -0.49
PRNP-201ENST00000379440 ERHP84090 104 aaKnown RBP11.96□□□□□ -0.49
PRNP-201ENST00000379440 MRGPRG-AS1Q2M3A8 158 aa11.96□□□□□ -0.49
PRNP-201ENST00000379440 C11orf71Q6IPW1 123 aa11.96□□□□□ -0.49
PRNP-201ENST00000379440 CYP2G1PQ6ZSU1 146 aa11.96□□□□□ -0.49
PRNP-201ENST00000379440 TMEM144Q7Z5S9 345 aa11.96□□□□□ -0.49
PRNP-201ENST00000379440 OR2T6Q8NHC8 308 aa11.96□□□□□ -0.49
PRNP-201ENST00000379440 NAGKQ9UJ70 344 aa11.96□□□□□ -0.49
PRNP-201ENST00000379440 SLC45A2Q9UMX9 530 aa11.96□□□□□ -0.49
PRNP-201ENST00000379440 IGHV2-70DA0A0C4DH43 119 aa11.96□□□□□ -0.5
PRNP-201ENST00000379440 A0A1W2PPR1 153 aa11.96□□□□□ -0.5
PRNP-201ENST00000379440 ZNF705FA8MVS1 300 aaPredicted RBP11.96□□□□□ -0.5
PRNP-201ENST00000379440 OR5G3P0C626 314 aa11.96□□□□□ -0.5
PRNP-201ENST00000379440 ZNF705DP0CH99 300 aaPredicted RBP11.96□□□□□ -0.5
PRNP-201ENST00000379440 ZNF705BP0CI00 300 aaPredicted RBP11.96□□□□□ -0.5
PRNP-201ENST00000379440 PF4V1P10720 104 aa11.96□□□□□ -0.5
PRNP-201ENST00000379440 RPL23P62829 140 aaKnown RBP11.96□□□□□ -0.5
PRNP-201ENST00000379440 TMEM249Q2WGJ8 235 aa11.96□□□□□ -0.5
PRNP-201ENST00000379440 OR8B3Q8NGG8 313 aa11.96□□□□□ -0.5
PRNP-201ENST00000379440 OR4A5Q8NH83 315 aa11.96□□□□□ -0.5
PRNP-201ENST00000379440 OR8B2Q96RD0 313 aa11.96□□□□□ -0.5
PRNP-201ENST00000379440 CLEC7AQ9BXN2 247 aa11.96□□□□□ -0.5
PRNP-201ENST00000379440 KCNIP2Q9NS61 270 aa11.96□□□□□ -0.5
PRNP-201ENST00000379440 ARHGAP32A7KAX9 2087 aa11.96□□□□□ -0.5
PRNP-201ENST00000379440 HIVEP3Q5T1R4 2406 aa11.96□□□□□ -0.5
PRNP-201ENST00000379440 FNDC10F2Z333 226 aa11.95□□□□□ -0.5
PRNP-201ENST00000379440 BUB1B-PAK6H3BSN5 160 aa11.95□□□□□ -0.5
PRNP-201ENST00000379440 FSTL3O95633 263 aa11.95□□□□□ -0.5
PRNP-201ENST00000379440 CXorf1O96002 111 aa11.95□□□□□ -0.5
PRNP-201ENST00000379440 IGHV3-48P01763 117 aa11.95□□□□□ -0.5
PRNP-201ENST00000379440 COMPP49747 757 aaPredicted RBP11.95□□□□□ -0.5
PRNP-201ENST00000379440 CD69Q07108 199 aa11.95□□□□□ -0.5
PRNP-201ENST00000379440 FBLN7Q53RD9 439 aa11.95□□□□□ -0.5
PRNP-201ENST00000379440 OR4X1Q8NH49 305 aa11.95□□□□□ -0.5
PRNP-201ENST00000379440 ONECUT1Q9UBC0 465 aa11.95□□□□□ -0.5
PRNP-201ENST00000379440 REG1AP05451 166 aa11.95□□□□□ -0.5
PRNP-201ENST00000379440 GNB1P62873 340 aa11.95□□□□□ -0.5
PRNP-201ENST00000379440 VMA21Q3ZAQ7 101 aa11.95□□□□□ -0.5
PRNP-201ENST00000379440 INSIG2Q9Y5U4 225 aa11.95□□□□□ -0.5
PRNP-201ENST00000379440 IGHV1-3A0A0C4DH29 117 aa11.94□□□□□ -0.5
PRNP-201ENST00000379440 CLDN34H7C241 214 aa11.94□□□□□ -0.5
PRNP-201ENST00000379440 UQCRFS1P47985 274 aa11.94□□□□□ -0.5
PRNP-201ENST00000379440 RHOBP62745 196 aa11.94□□□□□ -0.5
PRNP-201ENST00000379440 FAM78BQ5VT40 261 aa11.94□□□□□ -0.5
PRNP-201ENST00000379440 MIR17HGQ75NE6 70 aa11.94□□□□□ -0.5
PRNP-201ENST00000379440 PNKDQ8N490 385 aa11.94□□□□□ -0.5
PRNP-201ENST00000379440 DERL1Q9BUN8 251 aa11.94□□□□□ -0.5
PRNP-201ENST00000379440 NAV3Q8IVL0 2385 aa11.94□□□□□ -0.5
PRNP-201ENST00000379440 DLL1O00548 723 aa11.94□□□□□ -0.5
PRNP-201ENST00000379440 ATP5IP56385 69 aaPredicted RBP11.94□□□□□ -0.5
PRNP-201ENST00000379440 OR4P4Q8NGL7 312 aa11.94□□□□□ -0.5
PRNP-201ENST00000379440 ACY3Q96HD9 319 aa11.94□□□□□ -0.5
PRNP-201ENST00000379440 A0A1W2PPI3 338 aa11.94□□□□□ -0.5
PRNP-201ENST00000379440 NDUFB4O95168 129 aa11.94□□□□□ -0.5
PRNP-201ENST00000379440 APELAP0DMC3 54 aa11.94□□□□□ -0.5
PRNP-201ENST00000379440 LGALS7P47929 136 aa11.94□□□□□ -0.5
PRNP-201ENST00000379440 SSBP2P81877 361 aaPredicted RBP11.94□□□□□ -0.5
PRNP-201ENST00000379440 C8orf46Q8TAG6 207 aa11.94□□□□□ -0.5
PRNP-201ENST00000379440 TBX15Q96SF7 602 aa11.94□□□□□ -0.5
PRNP-201ENST00000379440 FNDC4Q9H6D8 234 aaPredicted RBP11.94□□□□□ -0.5
PRNP-201ENST00000379440 TMEM242Q9NWH2 141 aa11.94□□□□□ -0.5
PRNP-201ENST00000379440 GCHFRP30047 84 aa11.93□□□□□ -0.5
PRNP-201ENST00000379440 PDLIM4P50479 330 aa11.93□□□□□ -0.5
PRNP-201ENST00000379440 C16orf82Q7Z2V1 217 aa11.93□□□□□ -0.5
PRNP-201ENST00000379440 YTHDF2Q9Y5A9 579 aaKnown RBP11.93□□□□□ -0.5
PRNP-201ENST00000379440 INS-IGF2F8WCM5 200 aa11.93□□□□□ -0.5
PRNP-201ENST00000379440 LIPFP07098 398 aa11.93□□□□□ -0.5
PRNP-201ENST00000379440 RND2P52198 227 aa11.93□□□□□ -0.5
PRNP-201ENST00000379440 RPS20P60866 119 aaKnown RBP11.93□□□□□ -0.5
PRNP-201ENST00000379440 STPG4Q8N801 248 aa11.93□□□□□ -0.5
PRNP-201ENST00000379440 LY6G5BQ8NDX9 201 aa11.93□□□□□ -0.5
PRNP-201ENST00000379440 IGFBPL1Q8WX77 278 aa11.93□□□□□ -0.5
PRNP-201ENST00000379440 TIMD4Q96H15 378 aa11.93□□□□□ -0.5
PRNP-201ENST00000379440 TRBV24-1A0A075B6N3 115 aa11.92□□□□□ -0.5
PRNP-201ENST00000379440 A0A1B0GV72 72 aa11.92□□□□□ -0.5
PRNP-201ENST00000379440 PDE6DO43924 150 aa11.92□□□□□ -0.5
PRNP-201ENST00000379440 CDKN1AP38936 164 aa11.92□□□□□ -0.5
PRNP-201ENST00000379440 SLAQ13239 276 aa11.92□□□□□ -0.5
PRNP-201ENST00000379440 C19orf35Q6ZS72 473 aa11.92□□□□□ -0.5
PRNP-201ENST00000379440 NECAP1Q8NC96 275 aa11.92□□□□□ -0.5
PRNP-201ENST00000379440 RPEQ96AT9 228 aa11.92□□□□□ -0.5
PRNP-201ENST00000379440 COX11Q9Y6N1 276 aa11.92□□□□□ -0.5
PRNP-201ENST00000379440 TRAV30A0A087WSZ9 112 aa11.92□□□□□ -0.5
PRNP-201ENST00000379440 NDUFS7O75251 213 aa11.92□□□□□ -0.5
PRNP-201ENST00000379440 PSG5Q15238 335 aa11.92□□□□□ -0.5
PRNP-201ENST00000379440 MMDQ15546 238 aa11.92□□□□□ -0.5
PRNP-201ENST00000379440 TNXAQ16473 311 aa11.92□□□□□ -0.5
PRNP-201ENST00000379440 PRR27Q6MZM9 219 aa11.92□□□□□ -0.5
PRNP-201ENST00000379440 HCP5Q6MZN7 132 aa11.92□□□□□ -0.5
PRNP-201ENST00000379440 PGPEP1LA6NFU8 196 aa11.91□□□□□ -0.5
PRNP-201ENST00000379440 RIPPLY3P57055 190 aa11.91□□□□□ -0.5
PRNP-201ENST00000379440 PRSS8Q16651 343 aa11.91□□□□□ -0.5
PRNP-201ENST00000379440 TEX45Q8NA69 505 aa11.91□□□□□ -0.5
PRNP-201ENST00000379440 NEU4Q8WWR8 484 aaPredicted RBP11.91□□□□□ -0.5
PRNP-201ENST00000379440 CACNG8Q8WXS5 425 aa11.91□□□□□ -0.5
PRNP-201ENST00000379440 CTDSP1Q9GZU7 261 aa11.91□□□□□ -0.5
PRNP-201ENST00000379440 MRPL36Q9P0J6 103 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms