RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 TM4SF20Q53R12 229 aa14.23□□□□□ -0.13
SSU72-203ENST00000378725 ZNF600Q6ZNG1 722 aa14.23□□□□□ -0.13
SSU72-203ENST00000378725 WDR89Q96FK6 387 aaPredicted RBP14.23□□□□□ -0.13
SSU72-203ENST00000378725 ACY3Q96HD9 319 aa14.23□□□□□ -0.13
SSU72-203ENST00000378725 SLC35E1Q96K37 410 aa14.23□□□□□ -0.13
SSU72-203ENST00000378725 ZMAT5Q9UDW3 170 aaKnown RBP14.23□□□□□ -0.13
SSU72-203ENST00000378725 DEDDO75618 318 aa14.22□□□□□ -0.13
SSU72-203ENST00000378725 CBLN1P23435 193 aa14.22□□□□□ -0.13
SSU72-203ENST00000378725 OR10J1P30954 320 aa14.22□□□□□ -0.13
SSU72-203ENST00000378725 YPEL3P61236 119 aaPredicted RBP14.22□□□□□ -0.13
SSU72-203ENST00000378725 TIGITQ495A1 244 aa14.22□□□□□ -0.13
SSU72-203ENST00000378725 TOMM20LQ6UXN7 152 aa14.22□□□□□ -0.13
SSU72-203ENST00000378725 MED28Q9H204 178 aa14.22□□□□□ -0.13
SSU72-203ENST00000378725 CCNKO75909 580 aa14.21□□□□□ -0.13
SSU72-203ENST00000378725 METTL15P1P0C7V9 234 aa14.21□□□□□ -0.13
SSU72-203ENST00000378725 CXCL3P19876 107 aa14.21□□□□□ -0.13
SSU72-203ENST00000378725 EDN2P20800 178 aa14.21□□□□□ -0.13
SSU72-203ENST00000378725 FCN2Q15485 313 aa14.21□□□□□ -0.13
SSU72-203ENST00000378725 MARC2Q969Z3 335 aa14.21□□□□□ -0.13
SSU72-203ENST00000378725 DAZ1Q9NQZ3 744 aaKnown RBP14.21□□□□□ -0.13
SSU72-203ENST00000378725 LYRM2Q9NU23 88 aaPredicted RBP14.21□□□□□ -0.13
SSU72-203ENST00000378725 MRPL27Q9P0M9 148 aaKnown RBP14.21□□□□□ -0.13
SSU72-203ENST00000378725 PUS1Q9Y606 427 aaKnown RBP eCLIP14.21□□□□□ -0.13
SSU72-203ENST00000378725 IGKV1D-37A0A075B6S9 117 aa14.2□□□□□ -0.14
SSU72-203ENST00000378725 H0YIZ8 118 aa14.2□□□□□ -0.14
SSU72-203ENST00000378725 YIF1AO95070 293 aa14.2□□□□□ -0.14
SSU72-203ENST00000378725 RLN2P04090 185 aa14.2□□□□□ -0.14
SSU72-203ENST00000378725 OR8G2PQ6IF36 304 aa14.2□□□□□ -0.14
SSU72-203ENST00000378725 HAPLN4Q86UW8 402 aa14.2□□□□□ -0.14
SSU72-203ENST00000378725 THAP8Q8NA92 274 aa14.2□□□□□ -0.14
SSU72-203ENST00000378725 OR11H7Q8NGC8 314 aa14.2□□□□□ -0.14
SSU72-203ENST00000378725 OR10P1Q8NGE3 313 aa14.2□□□□□ -0.14
SSU72-203ENST00000378725 PPP1R1CQ8WVI7 109 aa14.2□□□□□ -0.14
SSU72-203ENST00000378725 C20orf24Q9BUV8 137 aa14.2□□□□□ -0.14
SSU72-203ENST00000378725 ZFAND3Q9H8U3 227 aa14.2□□□□□ -0.14
SSU72-203ENST00000378725 TECRQ9NZ01 308 aaKnown RBP14.2□□□□□ -0.14
SSU72-203ENST00000378725 NOTCH3Q9UM47 2321 aa14.19□□□□□ -0.14
SSU72-203ENST00000378725 IGHV3OR16-8A0A075B7F1 116 aa14.19□□□□□ -0.14
SSU72-203ENST00000378725 FAM24AA6NFZ4 105 aa14.19□□□□□ -0.14
SSU72-203ENST00000378725 FNDC10F2Z333 226 aa14.19□□□□□ -0.14
SSU72-203ENST00000378725 BCAP31P51572 246 aa14.19□□□□□ -0.14
SSU72-203ENST00000378725 CAV2P51636 162 aa14.19□□□□□ -0.14
SSU72-203ENST00000378725 DLK1P80370 383 aa14.19□□□□□ -0.14
SSU72-203ENST00000378725 ARL16Q0P5N6 197 aa14.19□□□□□ -0.14
SSU72-203ENST00000378725 DEFB114Q30KQ6 69 aa14.19□□□□□ -0.14
SSU72-203ENST00000378725 ACOT7LQ6ZUV0 252 aa14.19□□□□□ -0.14
SSU72-203ENST00000378725 TMEM252Q8N6L7 170 aa14.19□□□□□ -0.14
SSU72-203ENST00000378725 OR2K2Q8NGT1 345 aa14.19□□□□□ -0.14
SSU72-203ENST00000378725 Q8WTZ3 238 aa14.19□□□□□ -0.14
SSU72-203ENST00000378725 RNF126Q9BV68 326 aa14.19□□□□□ -0.14
SSU72-203ENST00000378725 GGACTQ9BVM4 153 aa14.19□□□□□ -0.14
SSU72-203ENST00000378725 FBN3Q75N90 2809 aa14.19□□□□□ -0.14
SSU72-203ENST00000378725 IGKV1OR2-108A0A075B7D4 117 aa14.18□□□□□ -0.14
SSU72-203ENST00000378725 E5RGE8 158 aa14.18□□□□□ -0.14
SSU72-203ENST00000378725 SCAF4O95104 1147 aaKnown RBP14.18□□□□□ -0.14
SSU72-203ENST00000378725 TOMM40O96008 361 aa14.18□□□□□ -0.14
SSU72-203ENST00000378725 RRAS2P62070 204 aaPredicted RBP14.18□□□□□ -0.14
SSU72-203ENST00000378725 LRRC37A5PQ49AS3 106 aa14.18□□□□□ -0.14
SSU72-203ENST00000378725 TMEM144Q7Z5S9 345 aa14.18□□□□□ -0.14
SSU72-203ENST00000378725 TRGV9Q99603 122 aa14.18□□□□□ -0.14
SSU72-203ENST00000378725 OR5AC2Q9NZP5 309 aa14.18□□□□□ -0.14
SSU72-203ENST00000378725 NBEAL1Q6ZS30 2694 aa14.17□□□□□ -0.14
SSU72-203ENST00000378725 TRAV14DV4A0A0A6YYC5 116 aa14.17□□□□□ -0.14
SSU72-203ENST00000378725 ZFP92A6NM28 416 aa14.17□□□□□ -0.14
SSU72-203ENST00000378725 MPC2O95563 127 aa14.17□□□□□ -0.14
SSU72-203ENST00000378725 RD3LP0DJH9 198 aa14.17□□□□□ -0.14
SSU72-203ENST00000378725 P2RY1P47900 373 aa14.17□□□□□ -0.14
SSU72-203ENST00000378725 DEFA6Q01524 100 aa14.17□□□□□ -0.14
SSU72-203ENST00000378725 GINS3Q9BRX5 216 aa14.17□□□□□ -0.14
SSU72-203ENST00000378725 MLXQ9UH92 298 aa14.17□□□□□ -0.14
SSU72-203ENST00000378725 SMPXQ9UHP9 88 aa14.17□□□□□ -0.14
SSU72-203ENST00000378725 IGHV7-4-1A0A0J9YVY3 117 aa14.16□□□□□ -0.14
SSU72-203ENST00000378725 IGSF23A1L1A6 192 aa14.16□□□□□ -0.14
SSU72-203ENST00000378725 ZNF207O43670 478 aaKnown RBP14.16□□□□□ -0.14
SSU72-203ENST00000378725 PSG1P11464 419 aa14.16□□□□□ -0.14
SSU72-203ENST00000378725 SULT1A1P50225 295 aa14.16□□□□□ -0.14
SSU72-203ENST00000378725 ZNF90Q03938 601 aa14.16□□□□□ -0.14
SSU72-203ENST00000378725 CD300EQ496F6 205 aaPredicted RBP14.16□□□□□ -0.14
SSU72-203ENST00000378725 DYNLRB2Q8TF09 96 aa14.16□□□□□ -0.14
SSU72-203ENST00000378725 NPVFQ9HCQ7 196 aa14.16□□□□□ -0.14
SSU72-203ENST00000378725 AURKAIP1Q9NWT8 199 aaPredicted RBP14.16□□□□□ -0.14
SSU72-203ENST00000378725 ZNF256Q9Y2P7 627 aaPredicted RBP14.16□□□□□ -0.14
SSU72-203ENST00000378725 CST7O76096 145 aa14.15□□□□□ -0.14
SSU72-203ENST00000378725 PRB2P02812 416 aaPredicted RBP14.15□□□□□ -0.14
SSU72-203ENST00000378725 PET100P0DJ07 73 aa14.15□□□□□ -0.14
SSU72-203ENST00000378725 ASB13Q8WXK3 278 aa14.15□□□□□ -0.14
SSU72-203ENST00000378725 WI2-2373I1.2A0A1W2PRP0 233 aa14.14□□□□□ -0.15
SSU72-203ENST00000378725 IZUMO1RA6ND01 250 aa14.14□□□□□ -0.15
SSU72-203ENST00000378725 CHEK1O14757 476 aa14.14□□□□□ -0.15
SSU72-203ENST00000378725 FABP1P07148 127 aa14.14□□□□□ -0.15
SSU72-203ENST00000378725 LYL1P12980 280 aa14.14□□□□□ -0.15
SSU72-203ENST00000378725 NPPCP23582 126 aa14.14□□□□□ -0.15
SSU72-203ENST00000378725 CRYBB3P26998 211 aa14.14□□□□□ -0.15
SSU72-203ENST00000378725 S100A11P31949 105 aa14.14□□□□□ -0.15
SSU72-203ENST00000378725 AKR1C1Q04828 323 aa14.14□□□□□ -0.15
SSU72-203ENST00000378725 SLC38A11Q08AI6 406 aa14.14□□□□□ -0.15
SSU72-203ENST00000378725 LCN12Q6JVE5 192 aa14.14□□□□□ -0.15
SSU72-203ENST00000378725 OR51G1Q8NGK1 321 aa14.14□□□□□ -0.15
SSU72-203ENST00000378725 SLC25A31Q9H0C2 315 aa14.14□□□□□ -0.15
SSU72-203ENST00000378725 VSIRQ9H7M9 311 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms