RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 AKAP6Q13023 2319 aa11.73□□□□□ -0.53
TRIM13-202ENST00000378182 B4DSR2 109 aa11.73□□□□□ -0.53
TRIM13-202ENST00000378182 TMEM249Q2WGJ8 235 aa11.73□□□□□ -0.53
TRIM13-202ENST00000378182 ANXA2RQ3ZCQ2 193 aa11.73□□□□□ -0.53
TRIM13-202ENST00000378182 RNF114Q9Y508 228 aa11.73□□□□□ -0.53
TRIM13-202ENST00000378182 MORN2Q502X0 79 aa11.73□□□□□ -0.53
TRIM13-202ENST00000378182 CHTOPQ9Y3Y2 248 aaKnown RBP11.73□□□□□ -0.53
TRIM13-202ENST00000378182 TRBV5-7A0A0A0MS05 114 aa11.72□□□□□ -0.53
TRIM13-202ENST00000378182 IGHV2-26A0A0B4J1V2 119 aa11.72□□□□□ -0.53
TRIM13-202ENST00000378182 TRAV8-2A0A0B4J237 113 aa11.72□□□□□ -0.53
TRIM13-202ENST00000378182 DPRXA6NFQ7 191 aa11.72□□□□□ -0.53
TRIM13-202ENST00000378182 F8WEM9 126 aa11.72□□□□□ -0.53
TRIM13-202ENST00000378182 CA1P00915 261 aaPredicted RBP11.72□□□□□ -0.53
TRIM13-202ENST00000378182 DEPPQ9NTK1 212 aa11.72□□□□□ -0.53
TRIM13-202ENST00000378182 TMEM200BQ69YZ2 307 aa11.72□□□□□ -0.53
TRIM13-202ENST00000378182 TCF23Q7RTU1 214 aa11.72□□□□□ -0.53
TRIM13-202ENST00000378182 C1QTNF5Q9BXJ0 243 aa11.72□□□□□ -0.53
TRIM13-202ENST00000378182 OTORQ9NRC9 128 aa11.72□□□□□ -0.53
TRIM13-202ENST00000378182 PLXND1Q9Y4D7 1925 aa11.72□□□□□ -0.53
TRIM13-202ENST00000378182 OR9G9P0C7N8 305 aa11.72□□□□□ -0.53
TRIM13-202ENST00000378182 C2orf68Q2NKX9 166 aa11.72□□□□□ -0.53
TRIM13-202ENST00000378182 SLC25A39Q9BZJ4 359 aaPredicted RBP11.72□□□□□ -0.53
TRIM13-202ENST00000378182 TRBV5-3A0A0A0MS03 114 aa11.72□□□□□ -0.53
TRIM13-202ENST00000378182 ZNF625Q96I27 306 aaPredicted RBP11.72□□□□□ -0.53
TRIM13-202ENST00000378182 MPTX1A8MV57 137 aa11.71□□□□□ -0.53
TRIM13-202ENST00000378182 NAT1P18440 290 aa11.71□□□□□ -0.53
TRIM13-202ENST00000378182 SUMO4Q6EEV6 95 aa11.71□□□□□ -0.53
TRIM13-202ENST00000378182 MBD3L1Q8WWY6 194 aa11.71□□□□□ -0.53
TRIM13-202ENST00000378182 CTAG1AP78358 180 aa11.71□□□□□ -0.53
TRIM13-202ENST00000378182 IGFL4Q6B9Z1 124 aa11.71□□□□□ -0.53
TRIM13-202ENST00000378182 IL36BQ9NZH7 164 aa11.71□□□□□ -0.53
TRIM13-202ENST00000378182 THSD7AQ9UPZ6 1657 aa11.71□□□□□ -0.54
TRIM13-202ENST00000378182 TRBV9A0A0B4J1U6 114 aa11.71□□□□□ -0.54
TRIM13-202ENST00000378182 ASCL2Q99929 193 aa11.71□□□□□ -0.54
TRIM13-202ENST00000378182 MRPS18AQ9NVS2 196 aaKnown RBP11.71□□□□□ -0.54
TRIM13-202ENST00000378182 TICRRQ7Z2Z1 1910 aa11.71□□□□□ -0.54
TRIM13-202ENST00000378182 MBD3L4A6NDZ8 208 aaPredicted RBP11.71□□□□□ -0.54
TRIM13-202ENST00000378182 MBD3L3A6NE82 208 aaPredicted RBP11.71□□□□□ -0.54
TRIM13-202ENST00000378182 MBD3L5A6NJ08 208 aaPredicted RBP11.71□□□□□ -0.54
TRIM13-202ENST00000378182 UPK2O00526 184 aa11.71□□□□□ -0.54
TRIM13-202ENST00000378182 ZNF600Q6ZNG1 722 aa11.71□□□□□ -0.54
TRIM13-202ENST00000378182 MBD3L2Q8NHZ7 208 aaPredicted RBP11.71□□□□□ -0.54
TRIM13-202ENST00000378182 BPESC1Q9GZL8 116 aa11.71□□□□□ -0.54
TRIM13-202ENST00000378182 SLC25A38Q96DW6 304 aa11.7□□□□□ -0.54
TRIM13-202ENST00000378182 MBNL3Q9NUK0 354 aaKnown RBP11.7□□□□□ -0.54
TRIM13-202ENST00000378182 FREM3P0C091 2139 aa11.7□□□□□ -0.54
TRIM13-202ENST00000378182 SRSF1Q07955 248 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRIM13-202ENST00000378182 LOC102723996A0A087X1L8 192 aa11.7□□□□□ -0.54
TRIM13-202ENST00000378182 GGTLC3B5MD39 225 aa11.7□□□□□ -0.54
TRIM13-202ENST00000378182 TOMM40O96008 361 aa11.7□□□□□ -0.54
TRIM13-202ENST00000378182 C20orf204Q6ZNR8 217 aa11.7□□□□□ -0.54
TRIM13-202ENST00000378182 NEUROG1Q92886 237 aa11.7□□□□□ -0.54
TRIM13-202ENST00000378182 MESP1Q9BRJ9 268 aa11.7□□□□□ -0.54
TRIM13-202ENST00000378182 DIDO1Q9BTC0 2240 aaKnown RBP11.7□□□□□ -0.54
TRIM13-202ENST00000378182 PIN1P1O15428 100 aa11.7□□□□□ -0.54
TRIM13-202ENST00000378182 HIST1H4AP62805 103 aaKnown RBP11.7□□□□□ -0.54
TRIM13-202ENST00000378182 SLC50A1Q9BRV3 221 aa11.7□□□□□ -0.54
TRIM13-202ENST00000378182 NAPSAO96009 420 aa11.69□□□□□ -0.54
TRIM13-202ENST00000378182 SMIM6P0DI80 62 aa11.69□□□□□ -0.54
TRIM13-202ENST00000378182 SELLP14151 372 aa11.69□□□□□ -0.54
TRIM13-202ENST00000378182 C1orf100Q5SVJ3 147 aa11.69□□□□□ -0.54
TRIM13-202ENST00000378182 GREM1O60565 184 aa11.69□□□□□ -0.54
TRIM13-202ENST00000378182 ZMAT4Q9H898 229 aa11.69□□□□□ -0.54
TRIM13-202ENST00000378182 RALGAPA2Q2PPJ7 1873 aa11.69□□□□□ -0.54
TRIM13-202ENST00000378182 PRR30Q53SZ7 412 aaPredicted RBP11.69□□□□□ -0.54
TRIM13-202ENST00000378182 TEX38Q6PEX7 206 aa11.69□□□□□ -0.54
TRIM13-202ENST00000378182 CTHRC1Q96CG8 243 aa11.69□□□□□ -0.54
TRIM13-202ENST00000378182 LCTP09848 1927 aa11.69□□□□□ -0.54
TRIM13-202ENST00000378182 ALPK2Q86TB3 2170 aa11.69□□□□□ -0.54
TRIM13-202ENST00000378182 PQLC2LA1A4F0 135 aa11.69□□□□□ -0.54
TRIM13-202ENST00000378182 LRRC37AA6NMS7 1700 aa11.68□□□□□ -0.54
TRIM13-202ENST00000378182 SYNJ2BPP57105 145 aa11.68□□□□□ -0.54
TRIM13-202ENST00000378182 ERCC8Q13216 396 aa11.68□□□□□ -0.54
TRIM13-202ENST00000378182 CIARTQ8N365 385 aaPredicted RBP11.68□□□□□ -0.54
TRIM13-202ENST00000378182 A0A096LPF7 62 aa11.68□□□□□ -0.54
TRIM13-202ENST00000378182 SRRM4A7MD48 611 aaKnown RBP11.68□□□□□ -0.54
TRIM13-202ENST00000378182 CCL1P22362 96 aa11.68□□□□□ -0.54
TRIM13-202ENST00000378182 CD300EQ496F6 205 aaPredicted RBP11.68□□□□□ -0.54
TRIM13-202ENST00000378182 TRAV5A0A0B4J249 113 aa11.68□□□□□ -0.54
TRIM13-202ENST00000378182 DANCRP0C864 163 aa11.68□□□□□ -0.54
TRIM13-202ENST00000378182 ZNF876PQ49A33 203 aa11.68□□□□□ -0.54
TRIM13-202ENST00000378182 KLF17Q5JT82 389 aaPredicted RBP11.68□□□□□ -0.54
TRIM13-202ENST00000378182 ZNF48Q96MX3 618 aaPredicted RBP11.68□□□□□ -0.54
TRIM13-202ENST00000378182 IGHV3-16A0A0C4DH30 117 aa11.68□□□□□ -0.54
TRIM13-202ENST00000378182 EXOC3-AS1Q8N2X6 119 aa11.68□□□□□ -0.54
TRIM13-202ENST00000378182 H2BFSP57053 126 aa11.68□□□□□ -0.54
TRIM13-202ENST00000378182 DLX4Q92988 240 aaPredicted RBP11.68□□□□□ -0.54
TRIM13-202ENST00000378182 LINC00477Q96M19 166 aa11.68□□□□□ -0.54
TRIM13-202ENST00000378182 SMDT1Q9H4I9 107 aa11.68□□□□□ -0.54
TRIM13-202ENST00000378182 CYSLTR1Q9Y271 337 aa11.68□□□□□ -0.54
TRIM13-202ENST00000378182 ADAMTS7Q9UKP4 1686 aa11.68□□□□□ -0.54
TRIM13-202ENST00000378182 C1QTNF9P0C862 333 aa11.68□□□□□ -0.54
TRIM13-202ENST00000378182 C6orf226Q5I0X4 101 aa11.68□□□□□ -0.54
TRIM13-202ENST00000378182 ZNF660Q6AZW8 331 aaPredicted RBP11.68□□□□□ -0.54
TRIM13-202ENST00000378182 RCC1LQ96I51 464 aaKnown RBP11.68□□□□□ -0.54
TRIM13-202ENST00000378182 SDK2Q58EX2 2172 aa11.67□□□□□ -0.54
TRIM13-202ENST00000378182 C15orf61A6NNL5 157 aa11.67□□□□□ -0.54
TRIM13-202ENST00000378182 GHRHP01286 108 aa11.67□□□□□ -0.54
TRIM13-202ENST00000378182 SPSB3Q6PJ21 355 aa11.67□□□□□ -0.54
TRIM13-202ENST00000378182 CMC4P56277 68 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms