RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 NTF4P34130 210 aa9.78□□□□□ -0.84
NPHP4-202ENST00000378161 PRSS12P56730 875 aa9.78□□□□□ -0.84
NPHP4-202ENST00000378161 ARHGEF17Q96PE2 2063 aaPredicted RBP9.78□□□□□ -0.84
NPHP4-202ENST00000378161 MOSP00540 346 aa9.77□□□□□ -0.84
NPHP4-202ENST00000378161 SRSF2Q01130 221 aaKnown RBP9.77□□□□□ -0.84
NPHP4-202ENST00000378161 C1QL2Q7Z5L3 287 aa9.77□□□□□ -0.84
NPHP4-202ENST00000378161 C15orf53Q8NAA6 179 aa9.77□□□□□ -0.84
NPHP4-202ENST00000378161 FAM234AQ9H0X4 552 aa9.77□□□□□ -0.84
NPHP4-202ENST00000378161 LOC101059948A0A1B0GTJ6 334 aa9.77□□□□□ -0.85
NPHP4-202ENST00000378161 FAM27BQ5VT28 67 aa9.77□□□□□ -0.85
NPHP4-202ENST00000378161 TEPPQ6URK8 271 aa9.77□□□□□ -0.85
NPHP4-202ENST00000378161 V9GYV3 84 aa9.77□□□□□ -0.85
NPHP4-202ENST00000378161 V9GYY9 64 aa9.77□□□□□ -0.85
NPHP4-202ENST00000378161 CENPFP49454 3210 aa9.77□□□□□ -0.85
NPHP4-202ENST00000378161 CGAP01215 116 aa9.77□□□□□ -0.85
NPHP4-202ENST00000378161 Q6AWC8 147 aa9.77□□□□□ -0.85
NPHP4-202ENST00000378161 OR9G1Q8NH87 305 aa9.77□□□□□ -0.85
NPHP4-202ENST00000378161 NRGNQ92686 78 aa9.77□□□□□ -0.85
NPHP4-202ENST00000378161 RTTNQ86VV8 2226 aa9.77□□□□□ -0.85
NPHP4-202ENST00000378161 H7C2G1 150 aa9.77□□□□□ -0.85
NPHP4-202ENST00000378161 COX7A2P2O60397 106 aa9.77□□□□□ -0.85
NPHP4-202ENST00000378161 ACP7Q6ZNF0 438 aa9.77□□□□□ -0.85
NPHP4-202ENST00000378161 C2orf70A6NJV1 201 aa9.76□□□□□ -0.85
NPHP4-202ENST00000378161 NPFFO15130 113 aa9.76□□□□□ -0.85
NPHP4-202ENST00000378161 XGP55808 180 aa9.76□□□□□ -0.85
NPHP4-202ENST00000378161 FNDC7Q5VTL7 733 aa9.76□□□□□ -0.85
NPHP4-202ENST00000378161 MBNL2Q5VZF2 373 aaKnown RBP9.76□□□□□ -0.85
NPHP4-202ENST00000378161 MYOZ3Q8TDC0 251 aa9.76□□□□□ -0.85
NPHP4-202ENST00000378161 IFI27L1Q96BM0 104 aa9.76□□□□□ -0.85
NPHP4-202ENST00000378161 UCN2Q96RP3 112 aa9.76□□□□□ -0.85
NPHP4-202ENST00000378161 PRADC1Q9BSG0 188 aa9.76□□□□□ -0.85
NPHP4-202ENST00000378161 SPANXDQ9BXN6 97 aa9.76□□□□□ -0.85
NPHP4-202ENST00000378161 KLF13Q9Y2Y9 288 aaPredicted RBP9.76□□□□□ -0.85
NPHP4-202ENST00000378161 WIPF3A6NGB9 483 aa9.76□□□□□ -0.85
NPHP4-202ENST00000378161 KLRB1Q12918 225 aa9.76□□□□□ -0.85
NPHP4-202ENST00000378161 NUP35Q8NFH5 326 aa9.76□□□□□ -0.85
NPHP4-202ENST00000378161 FLVCR1-AS1Q8TAF5 88 aa9.76□□□□□ -0.85
NPHP4-202ENST00000378161 TMEM160Q9NX00 188 aa9.76□□□□□ -0.85
NPHP4-202ENST00000378161 DNAH12Q6ZR08 3092 aa9.76□□□□□ -0.85
NPHP4-202ENST00000378161 GGTLC3B5MD39 225 aa9.76□□□□□ -0.85
NPHP4-202ENST00000378161 MORN3Q6PF18 240 aaPredicted RBP9.76□□□□□ -0.85
NPHP4-202ENST00000378161 TEN1Q86WV5 123 aa9.76□□□□□ -0.85
NPHP4-202ENST00000378161 SLC25A2Q9BXI2 301 aa9.76□□□□□ -0.85
NPHP4-202ENST00000378161 AMMECR1Q9Y4X0 333 aaPredicted RBP9.76□□□□□ -0.85
NPHP4-202ENST00000378161 TMEM30CPA0ZSE6 113 aa9.75□□□□□ -0.85
NPHP4-202ENST00000378161 OOEPA6NGQ2 149 aa9.75□□□□□ -0.85
NPHP4-202ENST00000378161 IGKV1D-33P01593 117 aa9.75□□□□□ -0.85
NPHP4-202ENST00000378161 IGKV1-33P01594 117 aa9.75□□□□□ -0.85
NPHP4-202ENST00000378161 FGFRL1Q8N441 504 aa9.75□□□□□ -0.85
NPHP4-202ENST00000378161 IGHV3-64DA0A0J9YX35 117 aa9.75□□□□□ -0.85
NPHP4-202ENST00000378161 SCTP09683 121 aa9.75□□□□□ -0.85
NPHP4-202ENST00000378161 LINC00310P59036 64 aa9.75□□□□□ -0.85
NPHP4-202ENST00000378161 IGFBP7Q16270 282 aa9.75□□□□□ -0.85
NPHP4-202ENST00000378161 RRN3P1Q2M238 152 aa9.75□□□□□ -0.85
NPHP4-202ENST00000378161 OR1L4Q8NGR5 311 aa9.75□□□□□ -0.85
NPHP4-202ENST00000378161 LRRC29Q8WV35 223 aa9.75□□□□□ -0.85
NPHP4-202ENST00000378161 C18orf15Q96N68 181 aa9.75□□□□□ -0.85
NPHP4-202ENST00000378161 C1RLQ9NZP8 487 aa9.75□□□□□ -0.85
NPHP4-202ENST00000378161 MPC1Q9Y5U8 109 aa9.75□□□□□ -0.85
NPHP4-202ENST00000378161 FREM3P0C091 2139 aa9.75□□□□□ -0.85
NPHP4-202ENST00000378161 KLF5Q13887 457 aaPredicted RBP9.75□□□□□ -0.85
NPHP4-202ENST00000378161 ZNF146Q15072 292 aa9.75□□□□□ -0.85
NPHP4-202ENST00000378161 KIR3DL3Q8N743 410 aa9.75□□□□□ -0.85
NPHP4-202ENST00000378161 ZG16O60844 167 aa9.75□□□□□ -0.85
NPHP4-202ENST00000378161 OR2J3O76001 311 aa9.75□□□□□ -0.85
NPHP4-202ENST00000378161 AREGP15514 252 aa9.75□□□□□ -0.85
NPHP4-202ENST00000378161 TRACP01848 142 aa9.74□□□□□ -0.85
NPHP4-202ENST00000378161 HBDP02042 147 aa9.74□□□□□ -0.85
NPHP4-202ENST00000378161 ZNF138P52744 262 aa9.74□□□□□ -0.85
NPHP4-202ENST00000378161 ZNF56Q15929 161 aa9.74□□□□□ -0.85
NPHP4-202ENST00000378161 KLF17Q5JT82 389 aaPredicted RBP9.74□□□□□ -0.85
NPHP4-202ENST00000378161 ALPK3Q96L96 1907 aa9.74□□□□□ -0.85
NPHP4-202ENST00000378161 NGFP01138 241 aa9.74□□□□□ -0.85
NPHP4-202ENST00000378161 C12orf74Q32Q52 190 aa9.74□□□□□ -0.85
NPHP4-202ENST00000378161 UBALD1Q8TB05 177 aa9.74□□□□□ -0.85
NPHP4-202ENST00000378161 CENPVL3A0A0U1RRI6 287 aa9.74□□□□□ -0.85
NPHP4-202ENST00000378161 COX6CP09669 75 aa9.74□□□□□ -0.85
NPHP4-202ENST00000378161 LIFP15018 202 aa9.74□□□□□ -0.85
NPHP4-202ENST00000378161 A0A1W2PPI3 338 aa9.73□□□□□ -0.85
NPHP4-202ENST00000378161 CCL3P10147 92 aa9.73□□□□□ -0.85
NPHP4-202ENST00000378161 KIR2DS2P43631 304 aa9.73□□□□□ -0.85
NPHP4-202ENST00000378161 ZNF474Q6S9Z5 364 aaPredicted RBP9.73□□□□□ -0.85
NPHP4-202ENST00000378161 ASCL5Q7RTU5 278 aa9.73□□□□□ -0.85
NPHP4-202ENST00000378161 CEND1Q8N111 149 aa9.73□□□□□ -0.85
NPHP4-202ENST00000378161 CIARTQ8N365 385 aaPredicted RBP9.73□□□□□ -0.85
NPHP4-202ENST00000378161 TEX45Q8NA69 505 aa9.73□□□□□ -0.85
NPHP4-202ENST00000378161 GTSF1Q8WW33 167 aa9.73□□□□□ -0.85
NPHP4-202ENST00000378161 SVILO95425 2214 aa9.73□□□□□ -0.85
NPHP4-202ENST00000378161 FXYD2P54710 66 aa9.73□□□□□ -0.85
NPHP4-202ENST00000378161 DEPPQ9NTK1 212 aa9.73□□□□□ -0.85
NPHP4-202ENST00000378161 C21orf140B9A014 251 aa9.73□□□□□ -0.85
NPHP4-202ENST00000378161 NPPCP23582 126 aa9.73□□□□□ -0.85
NPHP4-202ENST00000378161 LTBRP36941 435 aa9.73□□□□□ -0.85
NPHP4-202ENST00000378161 SPATA46Q5T0L3 261 aa9.73□□□□□ -0.85
NPHP4-202ENST00000378161 LINC00173Q6ZV60 143 aa9.73□□□□□ -0.85
NPHP4-202ENST00000378161 RPRMLQ8N4K4 120 aa9.73□□□□□ -0.85
NPHP4-202ENST00000378161 ATP23Q9Y6H3 246 aa9.73□□□□□ -0.85
NPHP4-202ENST00000378161 IGKV3D-11A0A0A0MRZ8 115 aa9.72□□□□□ -0.85
NPHP4-202ENST00000378161 PDPNQ86YL7 162 aa9.72□□□□□ -0.85
NPHP4-202ENST00000378161 LRRC75A-AS1Q8N1F1 130 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms