RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 TM4SF5O14894 197 aa10□□□□□ -0.81
PCDHA9-201ENST00000378122 ATP5IP56385 69 aaPredicted RBP10□□□□□ -0.81
PCDHA9-201ENST00000378122 GBF1Q92538 1859 aa9.99□□□□□ -0.81
PCDHA9-201ENST00000378122 DNAL4O96015 105 aa9.99□□□□□ -0.81
PCDHA9-201ENST00000378122 TSPOP30536 169 aa9.99□□□□□ -0.81
PCDHA9-201ENST00000378122 CEACAM4O75871 244 aa9.99□□□□□ -0.81
PCDHA9-201ENST00000378122 LINC00614P0C842 121 aa9.99□□□□□ -0.81
PCDHA9-201ENST00000378122 RAB9AP51151 201 aa9.99□□□□□ -0.81
PCDHA9-201ENST00000378122 ZNF497Q6ZNH5 498 aa9.99□□□□□ -0.81
PCDHA9-201ENST00000378122 DOCK4Q8N1I0 1966 aa9.99□□□□□ -0.81
PCDHA9-201ENST00000378122 PSG7Q13046 419 aa9.99□□□□□ -0.81
PCDHA9-201ENST00000378122 TMEM95Q3KNT9 176 aa9.99□□□□□ -0.81
PCDHA9-201ENST00000378122 LDLRAD2Q5SZI1 272 aa9.99□□□□□ -0.81
PCDHA9-201ENST00000378122 ORMDL3Q8N138 153 aa9.99□□□□□ -0.81
PCDHA9-201ENST00000378122 GNB1LQ9BYB4 327 aa9.99□□□□□ -0.81
PCDHA9-201ENST00000378122 NHP2Q9NX24 153 aaKnown RBP9.99□□□□□ -0.81
PCDHA9-201ENST00000378122 TMEM50AO95807 157 aa9.99□□□□□ -0.81
PCDHA9-201ENST00000378122 OR9G9P0C7N8 305 aa9.99□□□□□ -0.81
PCDHA9-201ENST00000378122 PRR30Q53SZ7 412 aaPredicted RBP9.99□□□□□ -0.81
PCDHA9-201ENST00000378122 OR9G4Q8NGQ1 327 aa9.99□□□□□ -0.81
PCDHA9-201ENST00000378122 OCC1Q8TAD7 63 aa9.99□□□□□ -0.81
PCDHA9-201ENST00000378122 IQCF6A8MYZ5 107 aa9.99□□□□□ -0.81
PCDHA9-201ENST00000378122 NDUFS6O75380 124 aaKnown RBP9.99□□□□□ -0.81
PCDHA9-201ENST00000378122 SFTA2Q6UW10 78 aa9.99□□□□□ -0.81
PCDHA9-201ENST00000378122 C9orf106Q8NAJ2 232 aa9.99□□□□□ -0.81
PCDHA9-201ENST00000378122 SEC16AO15027 2179 aa9.98□□□□□ -0.81
PCDHA9-201ENST00000378122 J3QW42 95 aa9.98□□□□□ -0.81
PCDHA9-201ENST00000378122 MPZP25189 248 aa9.98□□□□□ -0.81
PCDHA9-201ENST00000378122 BRD3OSQ6XYD6 125 aa9.98□□□□□ -0.81
PCDHA9-201ENST00000378122 TRAV12-3A0A0B4J271 114 aa9.98□□□□□ -0.81
PCDHA9-201ENST00000378122 A0A1B0GW15 77 aa9.98□□□□□ -0.81
PCDHA9-201ENST00000378122 PYYP10082 97 aa9.98□□□□□ -0.81
PCDHA9-201ENST00000378122 PRR31Q5SQ13 230 aa9.98□□□□□ -0.81
PCDHA9-201ENST00000378122 ZNF319Q9P2F9 582 aa9.98□□□□□ -0.81
PCDHA9-201ENST00000378122 ERVK11-1P61568 191 aa9.98□□□□□ -0.81
PCDHA9-201ENST00000378122 FAM71F2Q6NXP2 309 aa9.98□□□□□ -0.81
PCDHA9-201ENST00000378122 OTORQ9NRC9 128 aa9.98□□□□□ -0.81
PCDHA9-201ENST00000378122 TRAV8-2A0A0B4J237 113 aa9.98□□□□□ -0.81
PCDHA9-201ENST00000378122 LILRA1O75019 489 aa9.98□□□□□ -0.81
PCDHA9-201ENST00000378122 RNASEH2CQ8TDP1 164 aaKnown RBP9.98□□□□□ -0.81
PCDHA9-201ENST00000378122 ARPC1AQ92747 370 aa9.98□□□□□ -0.81
PCDHA9-201ENST00000378122 TMEM101Q96IK0 257 aa9.98□□□□□ -0.81
PCDHA9-201ENST00000378122 STAG3L3P0CL85 134 aa9.98□□□□□ -0.81
PCDHA9-201ENST00000378122 ZNF257Q9Y2Q1 563 aa9.98□□□□□ -0.81
PCDHA9-201ENST00000378122 CRPP02741 224 aa9.97□□□□□ -0.81
PCDHA9-201ENST00000378122 NPC2P61916 151 aa9.97□□□□□ -0.81
PCDHA9-201ENST00000378122 C15orf61A6NNL5 157 aa9.97□□□□□ -0.81
PCDHA9-201ENST00000378122 CCL1P22362 96 aa9.97□□□□□ -0.81
PCDHA9-201ENST00000378122 PPP1R27Q86WC6 154 aa9.97□□□□□ -0.81
PCDHA9-201ENST00000378122 DOCK6Q96HP0 2047 aa9.97□□□□□ -0.81
PCDHA9-201ENST00000378122 UPK2O00526 184 aa9.97□□□□□ -0.81
PCDHA9-201ENST00000378122 TNFSF13O75888 250 aa9.97□□□□□ -0.81
PCDHA9-201ENST00000378122 TNFRSF18Q9Y5U5 241 aa9.97□□□□□ -0.81
PCDHA9-201ENST00000378122 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.97□□□□□ -0.81
PCDHA9-201ENST00000378122 EVI2AP22794 236 aa9.97□□□□□ -0.81
PCDHA9-201ENST00000378122 FLVCR1-AS1Q8TAF5 88 aa9.97□□□□□ -0.81
PCDHA9-201ENST00000378122 ORAOV1Q8WV07 137 aa9.97□□□□□ -0.81
PCDHA9-201ENST00000378122 SIGMAR1Q99720 223 aa9.97□□□□□ -0.81
PCDHA9-201ENST00000378122 TIMM23BQ5SRD1 257 aa9.97□□□□□ -0.81
PCDHA9-201ENST00000378122 WBP1Q96G27 269 aa9.97□□□□□ -0.81
PCDHA9-201ENST00000378122 RFNGQ9Y644 331 aa9.97□□□□□ -0.81
PCDHA9-201ENST00000378122 GLRXP35754 106 aa9.96□□□□□ -0.81
PCDHA9-201ENST00000378122 ANAPC13Q9BS18 74 aa9.96□□□□□ -0.81
PCDHA9-201ENST00000378122 VCX2Q9H322 139 aa9.96□□□□□ -0.81
PCDHA9-201ENST00000378122 IGHV3-64A0A075B6Q5 118 aa9.96□□□□□ -0.81
PCDHA9-201ENST00000378122 NAPSAO96009 420 aa9.96□□□□□ -0.81
PCDHA9-201ENST00000378122 ACTL10Q5JWF8 245 aa9.96□□□□□ -0.81
PCDHA9-201ENST00000378122 RTN4RL2Q86UN3 420 aa9.96□□□□□ -0.81
PCDHA9-201ENST00000378122 FAM89BQ8N5H3 189 aa9.96□□□□□ -0.81
PCDHA9-201ENST00000378122 SDK2Q58EX2 2172 aa9.96□□□□□ -0.82
PCDHA9-201ENST00000378122 E9PLN8 166 aa9.96□□□□□ -0.82
PCDHA9-201ENST00000378122 LHBP01229 141 aa9.96□□□□□ -0.82
PCDHA9-201ENST00000378122 VKORC1Q9BQB6 163 aa9.96□□□□□ -0.82
PCDHA9-201ENST00000378122 C2orf88Q9BSF0 95 aa9.96□□□□□ -0.82
PCDHA9-201ENST00000378122 SEPSECSQ9HD40 501 aaKnown RBP9.96□□□□□ -0.82
PCDHA9-201ENST00000378122 ANK1P16157 1881 aa9.96□□□□□ -0.82
PCDHA9-201ENST00000378122 MORN2Q502X0 79 aa9.96□□□□□ -0.82
PCDHA9-201ENST00000378122 HOXA3O43365 443 aaPredicted RBP9.96□□□□□ -0.82
PCDHA9-201ENST00000378122 UMODP07911 640 aa9.96□□□□□ -0.82
PCDHA9-201ENST00000378122 FGFBP3Q8TAT2 258 aa9.96□□□□□ -0.82
PCDHA9-201ENST00000378122 OSTCQ9NRP0 149 aa9.96□□□□□ -0.82
PCDHA9-201ENST00000378122 C21orf62Q9NYP8 219 aa9.96□□□□□ -0.82
PCDHA9-201ENST00000378122 TRGV4A0A0C4DH28 118 aa9.95□□□□□ -0.82
PCDHA9-201ENST00000378122 CCL3L1P16619 93 aa9.95□□□□□ -0.82
PCDHA9-201ENST00000378122 Q6AWC8 147 aa9.95□□□□□ -0.82
PCDHA9-201ENST00000378122 CIARTQ8N365 385 aaPredicted RBP9.95□□□□□ -0.82
PCDHA9-201ENST00000378122 MBD3L1Q8WWY6 194 aa9.95□□□□□ -0.82
PCDHA9-201ENST00000378122 COQ2Q96H96 371 aa9.95□□□□□ -0.82
PCDHA9-201ENST00000378122 UBE2E2Q96LR5 201 aa9.95□□□□□ -0.82
PCDHA9-201ENST00000378122 TMEM242Q9NWH2 141 aa9.95□□□□□ -0.82
PCDHA9-201ENST00000378122 EPDR1Q9UM22 224 aa9.95□□□□□ -0.82
PCDHA9-201ENST00000378122 TP53BP1Q12888 1972 aaPredicted RBP9.95□□□□□ -0.82
PCDHA9-201ENST00000378122 LY6HO94772 140 aa9.95□□□□□ -0.82
PCDHA9-201ENST00000378122 CHD3Q12873 2000 aaKnown RBP9.95□□□□□ -0.82
PCDHA9-201ENST00000378122 TRAV5A0A0B4J249 113 aa9.95□□□□□ -0.82
PCDHA9-201ENST00000378122 E9PQ18 207 aa9.95□□□□□ -0.82
PCDHA9-201ENST00000378122 DSCR9P59020 149 aa9.95□□□□□ -0.82
PCDHA9-201ENST00000378122 SEMA5BQ9P283 1151 aa9.95□□□□□ -0.82
PCDHA9-201ENST00000378122 CFHR3Q02985 330 aa9.95□□□□□ -0.82
PCDHA9-201ENST00000378122 EFNB3Q15768 340 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms