RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 BMPERQ8N8U9 685 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 SMPXQ9UHP9 88 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 TRBV20OR9-2A0A075B6H5 130 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 TRAV3A0A0B4J244 114 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 TRAV5A0A0B4J249 113 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 PPP1R17O96001 155 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 FAM106CPP0CH98 169 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 CT83Q5H943 113 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 FAM231DQ6ZW35 169 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 MYO9BQ13459 2157 aa7.22□□□□□ -1.25
PCDH9-202ENST00000377865 OR11H12B2RN74 326 aa7.21□□□□□ -1.25
PCDH9-202ENST00000377865 CDX4O14627 284 aaPredicted RBP7.21□□□□□ -1.25
PCDH9-202ENST00000377865 C9orf106Q8NAJ2 232 aa7.21□□□□□ -1.25
PCDH9-202ENST00000377865 OR11H1Q8NG94 326 aa7.21□□□□□ -1.25
PCDH9-202ENST00000377865 OR11H2Q8NH07 326 aa7.21□□□□□ -1.25
PCDH9-202ENST00000377865 NCOR1P1Q9H4R4 102 aa7.21□□□□□ -1.25
PCDH9-202ENST00000377865 RPUSD1Q9UJJ7 312 aaKnown RBP7.21□□□□□ -1.25
PCDH9-202ENST00000377865 TOMM40O96008 361 aa7.21□□□□□ -1.26
PCDH9-202ENST00000377865 CD40P25942 277 aa7.21□□□□□ -1.26
PCDH9-202ENST00000377865 TNFRSF14Q92956 283 aa7.21□□□□□ -1.26
PCDH9-202ENST00000377865 C11orf1Q9H5F2 150 aa7.21□□□□□ -1.26
PCDH9-202ENST00000377865 FNDC4Q9H6D8 234 aaPredicted RBP7.21□□□□□ -1.26
PCDH9-202ENST00000377865 NXT2Q9NPJ8 142 aaKnown RBP7.21□□□□□ -1.26
PCDH9-202ENST00000377865 CRIM1Q9NZV1 1036 aa7.21□□□□□ -1.26
PCDH9-202ENST00000377865 PSG8Q9UQ74 426 aa7.21□□□□□ -1.26
PCDH9-202ENST00000377865 GON4LQ3T8J9 2241 aa7.21□□□□□ -1.26
PCDH9-202ENST00000377865 NKX2-8O15522 239 aa7.21□□□□□ -1.26
PCDH9-202ENST00000377865 RPRMLQ8N4K4 120 aa7.21□□□□□ -1.26
PCDH9-202ENST00000377865 TMEM167AQ8TBQ9 72 aa7.21□□□□□ -1.26
PCDH9-202ENST00000377865 FAM90A27PA6NNH2 459 aa7.21□□□□□ -1.26
PCDH9-202ENST00000377865 TFF1P04155 84 aa7.21□□□□□ -1.26
PCDH9-202ENST00000377865 VDAC2P45880 294 aaPredicted RBP7.21□□□□□ -1.26
PCDH9-202ENST00000377865 ECSCRQ19T08 205 aa7.21□□□□□ -1.26
PCDH9-202ENST00000377865 C18orf32Q8TCD1 76 aa7.21□□□□□ -1.26
PCDH9-202ENST00000377865 C16orf92Q96LL3 132 aa7.21□□□□□ -1.26
PCDH9-202ENST00000377865 FOXC2Q99958 501 aa7.21□□□□□ -1.26
PCDH9-202ENST00000377865 PROK2Q9HC23 129 aa7.21□□□□□ -1.26
PCDH9-202ENST00000377865 UNC13CQ8NB66 2214 aa7.21□□□□□ -1.26
PCDH9-202ENST00000377865 LOC107984156A0A0G2JMH3 177 aa7.2□□□□□ -1.26
PCDH9-202ENST00000377865 FAM231BA6NCW3 169 aa7.2□□□□□ -1.26
PCDH9-202ENST00000377865 SNAI2O43623 268 aa7.2□□□□□ -1.26
PCDH9-202ENST00000377865 ARL17AQ8IVW1 177 aa7.2□□□□□ -1.26
PCDH9-202ENST00000377865 ZNF502Q8TBZ5 544 aa7.2□□□□□ -1.26
PCDH9-202ENST00000377865 SCRT1Q9BWW7 348 aa7.2□□□□□ -1.26
PCDH9-202ENST00000377865 TMEM160Q9NX00 188 aa7.2□□□□□ -1.26
PCDH9-202ENST00000377865 M0R3E3 92 aa7.2□□□□□ -1.26
PCDH9-202ENST00000377865 SYT8Q8NBV8 401 aa7.2□□□□□ -1.26
PCDH9-202ENST00000377865 OR2K2Q8NGT1 345 aa7.2□□□□□ -1.26
PCDH9-202ENST00000377865 MEGF9Q9H1U4 602 aa7.2□□□□□ -1.26
PCDH9-202ENST00000377865 TCRAP04437 139 aa7.2□□□□□ -1.26
PCDH9-202ENST00000377865 NPSP0C0P6 89 aa7.2□□□□□ -1.26
PCDH9-202ENST00000377865 TMEM14BQ9NUH8 114 aa7.2□□□□□ -1.26
PCDH9-202ENST00000377865 DPM2O94777 84 aa7.2□□□□□ -1.26
PCDH9-202ENST00000377865 LEPP41159 167 aa7.2□□□□□ -1.26
PCDH9-202ENST00000377865 FAM201AQ5SY85 155 aa7.2□□□□□ -1.26
PCDH9-202ENST00000377865 KIAA0100Q14667 2235 aaKnown RBP7.2□□□□□ -1.26
PCDH9-202ENST00000377865 IGHV2-26A0A0B4J1V2 119 aa7.2□□□□□ -1.26
PCDH9-202ENST00000377865 A0A1B0GUS0 222 aa7.2□□□□□ -1.26
PCDH9-202ENST00000377865 B9A039 149 aa7.2□□□□□ -1.26
PCDH9-202ENST00000377865 HILPDAQ9Y5L2 63 aa7.2□□□□□ -1.26
PCDH9-202ENST00000377865 SNCGO76070 127 aa7.19□□□□□ -1.26
PCDH9-202ENST00000377865 RNASE2P10153 161 aaKnown RBP7.19□□□□□ -1.26
PCDH9-202ENST00000377865 LGALS3P17931 250 aaKnown RBP7.19□□□□□ -1.26
PCDH9-202ENST00000377865 FAM169BQ8N8A8 192 aa7.19□□□□□ -1.26
PCDH9-202ENST00000377865 METRNQ9UJH8 293 aa7.19□□□□□ -1.26
PCDH9-202ENST00000377865 A0A1W2PRD5 423 aa7.19□□□□□ -1.26
PCDH9-202ENST00000377865 A0A1W2PRF3 423 aa7.19□□□□□ -1.26
PCDH9-202ENST00000377865 A0A1W2PRM7 423 aa7.19□□□□□ -1.26
PCDH9-202ENST00000377865 MPV17L2Q567V2 206 aa7.19□□□□□ -1.26
PCDH9-202ENST00000377865 ATP1A1-AS1Q5TC04 95 aa7.19□□□□□ -1.26
PCDH9-202ENST00000377865 LCN12Q6JVE5 192 aa7.19□□□□□ -1.26
PCDH9-202ENST00000377865 EEF1AKMT3Q96AZ1 226 aa7.19□□□□□ -1.26
PCDH9-202ENST00000377865 IGKCP01834 107 aa7.19□□□□□ -1.26
PCDH9-202ENST00000377865 DLX6P56179 175 aa7.19□□□□□ -1.26
PCDH9-202ENST00000377865 IFI27L1Q96BM0 104 aa7.19□□□□□ -1.26
PCDH9-202ENST00000377865 SLC25A39Q9BZJ4 359 aaPredicted RBP7.19□□□□□ -1.26
PCDH9-202ENST00000377865 C17orf100A8MU93 164 aa7.19□□□□□ -1.26
PCDH9-202ENST00000377865 C9orf172C9J069 976 aa7.19□□□□□ -1.26
PCDH9-202ENST00000377865 SELLP14151 372 aa7.19□□□□□ -1.26
PCDH9-202ENST00000377865 CACNG7P62955 275 aa7.19□□□□□ -1.26
PCDH9-202ENST00000377865 TPTE2P1Q5T6R2 138 aa7.19□□□□□ -1.26
PCDH9-202ENST00000377865 LYPD1Q8N2G4 141 aa7.19□□□□□ -1.26
PCDH9-202ENST00000377865 OR10W1Q8NGF6 305 aa7.19□□□□□ -1.26
PCDH9-202ENST00000377865 WIPF2Q8TF74 440 aaPredicted RBP7.19□□□□□ -1.26
PCDH9-202ENST00000377865 PLSCR4Q9NRQ2 329 aa7.19□□□□□ -1.26
PCDH9-202ENST00000377865 hDV102S1A0JD36 115 aa7.18□□□□□ -1.26
PCDH9-202ENST00000377865 COX6CP09669 75 aa7.18□□□□□ -1.26
PCDH9-202ENST00000377865 SAMD5Q5TGI4 173 aa7.18□□□□□ -1.26
PCDH9-202ENST00000377865 C18orf15Q96N68 181 aa7.18□□□□□ -1.26
PCDH9-202ENST00000377865 SIGMAR1Q99720 223 aa7.18□□□□□ -1.26
PCDH9-202ENST00000377865 ASCL2Q99929 193 aa7.18□□□□□ -1.26
PCDH9-202ENST00000377865 FBXL15Q9H469 300 aa7.18□□□□□ -1.26
PCDH9-202ENST00000377865 PHLDA3Q9Y5J5 127 aa7.18□□□□□ -1.26
PCDH9-202ENST00000377865 FAM53AQ6NSI3 398 aaPredicted RBP7.18□□□□□ -1.26
PCDH9-202ENST00000377865 MDS2Q8NDY4 140 aa7.18□□□□□ -1.26
PCDH9-202ENST00000377865 MRPL16Q9NX20 251 aaKnown RBP7.18□□□□□ -1.26
PCDH9-202ENST00000377865 F2Z2F3 143 aa7.18□□□□□ -1.26
PCDH9-202ENST00000377865 H0YJW9 148 aa7.18□□□□□ -1.26
PCDH9-202ENST00000377865 RNF125Q96EQ8 232 aa7.18□□□□□ -1.26
PCDH9-202ENST00000377865 A0A0G2JLM5 398 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms