RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 BAGE2Q86Y30 109 aa9.42□□□□□ -0.9
TNFRSF9-201ENST00000377507 SMIM12Q96EX1 92 aa9.42□□□□□ -0.9
TNFRSF9-201ENST00000377507 MISP3Q96FF7 219 aa9.42□□□□□ -0.9
TNFRSF9-201ENST00000377507 C7orf69Q9H7B7 122 aa9.42□□□□□ -0.9
TNFRSF9-201ENST00000377507 TNFRSF19Q9NS68 423 aa9.42□□□□□ -0.9
TNFRSF9-201ENST00000377507 KLF12Q9Y4X4 402 aa9.42□□□□□ -0.9
TNFRSF9-201ENST00000377507 IGHV2-26A0A0B4J1V2 119 aa9.41□□□□□ -0.9
TNFRSF9-201ENST00000377507 IGHV3-48P01763 117 aa9.41□□□□□ -0.9
TNFRSF9-201ENST00000377507 GPX1P07203 203 aa9.41□□□□□ -0.9
TNFRSF9-201ENST00000377507 COMPP49747 757 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF9-201ENST00000377507 PLP1P60201 277 aa9.41□□□□□ -0.9
TNFRSF9-201ENST00000377507 TMEM183BQ1AE95 376 aa9.41□□□□□ -0.9
TNFRSF9-201ENST00000377507 TEX43Q6ZNM6 134 aa9.41□□□□□ -0.9
TNFRSF9-201ENST00000377507 FAM168AQ92567 244 aa9.41□□□□□ -0.9
TNFRSF9-201ENST00000377507 PERPQ96FX8 193 aa9.41□□□□□ -0.9
TNFRSF9-201ENST00000377507 VKORC1Q9BQB6 163 aa9.41□□□□□ -0.9
TNFRSF9-201ENST00000377507 SIGLEC9Q9Y336 463 aa9.41□□□□□ -0.9
TNFRSF9-201ENST00000377507 CORTO00230 105 aa9.41□□□□□ -0.9
TNFRSF9-201ENST00000377507 BMPR1BO00238 502 aa9.41□□□□□ -0.9
TNFRSF9-201ENST00000377507 RBP4P02753 201 aa9.41□□□□□ -0.9
TNFRSF9-201ENST00000377507 REG1AP05451 166 aa9.41□□□□□ -0.9
TNFRSF9-201ENST00000377507 SNRPCP09234 159 aaKnown RBP9.41□□□□□ -0.9
TNFRSF9-201ENST00000377507 BRS3P32247 399 aa9.41□□□□□ -0.9
TNFRSF9-201ENST00000377507 RPL27AP46776 148 aaKnown RBP9.41□□□□□ -0.9
TNFRSF9-201ENST00000377507 PRRX1P54821 245 aa9.41□□□□□ -0.9
TNFRSF9-201ENST00000377507 PRR30Q53SZ7 412 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF9-201ENST00000377507 TBX15Q96SF7 602 aa9.41□□□□□ -0.9
TNFRSF9-201ENST00000377507 HSPB9Q9BQS6 159 aa9.41□□□□□ -0.9
TNFRSF9-201ENST00000377507 ZGRF1Q86YA3 2104 aa9.4□□□□□ -0.9
TNFRSF9-201ENST00000377507 IGHV3-72A0A0B4J1Y9 119 aa9.4□□□□□ -0.9
TNFRSF9-201ENST00000377507 IGHV1-3A0A0C4DH29 117 aa9.4□□□□□ -0.9
TNFRSF9-201ENST00000377507 BUB1B-PAK6H3BSN5 160 aa9.4□□□□□ -0.9
TNFRSF9-201ENST00000377507 ENSAO43768 121 aaKnown RBP9.4□□□□□ -0.9
TNFRSF9-201ENST00000377507 SPINK4O60575 86 aa9.4□□□□□ -0.9
TNFRSF9-201ENST00000377507 TCL1AP56279 114 aa9.4□□□□□ -0.9
TNFRSF9-201ENST00000377507 SSTP61278 116 aa9.4□□□□□ -0.9
TNFRSF9-201ENST00000377507 SLC35B1P78383 322 aa9.4□□□□□ -0.9
TNFRSF9-201ENST00000377507 HCP5Q6MZN7 132 aa9.4□□□□□ -0.9
TNFRSF9-201ENST00000377507 SPACA3Q8IXA5 215 aa9.4□□□□□ -0.9
TNFRSF9-201ENST00000377507 NUDT10Q8NFP7 164 aa9.4□□□□□ -0.9
TNFRSF9-201ENST00000377507 NUDT11Q96G61 164 aa9.4□□□□□ -0.9
TNFRSF9-201ENST00000377507 GRAMD2BQ96HH9 432 aa9.4□□□□□ -0.9
TNFRSF9-201ENST00000377507 C20orf144Q9BQM9 153 aa9.4□□□□□ -0.9
TNFRSF9-201ENST00000377507 CHRDL1Q9BU40 450 aa9.4□□□□□ -0.9
TNFRSF9-201ENST00000377507 EPDR1Q9UM22 224 aa9.4□□□□□ -0.9
TNFRSF9-201ENST00000377507 SMG1Q96Q15 3661 aaKnown RBP9.4□□□□□ -0.9
TNFRSF9-201ENST00000377507 AKAP13Q12802 2813 aa9.4□□□□□ -0.91
TNFRSF9-201ENST00000377507 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 CA1P00915 261 aaPredicted RBP9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 CD3EP07766 207 aa9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 CD33P20138 364 aa9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 RBPJQ06330 500 aa9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 NHLRC2Q8NBF2 726 aa9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 C8orf46Q8TAG6 207 aa9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 RNF5Q99942 180 aa9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 MLST8Q9BVC4 326 aa9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 SERTAD4Q9NUC0 356 aa9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 F11RQ9Y624 299 aaKnown RBP9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 ZNF705FA8MVS1 300 aaPredicted RBP9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 TEX22C9J3V5 150 aa9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 LY6LH3BQJ8 138 aa9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 K7ENP7 123 aa9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 MOSP00540 346 aa9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 ZNF705DP0CH99 300 aaPredicted RBP9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 ZNF705BP0CI00 300 aaPredicted RBP9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 ORM2P19652 201 aa9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 CNTFRP26992 372 aa9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 TNXAQ16473 311 aa9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 MRPL54Q6P161 138 aaKnown RBP9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 PPP1R27Q86WC6 154 aa9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 C22orf15Q8WYQ4 148 aa9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 CLEC7AQ9BXN2 247 aa9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 INSIG2Q9Y5U4 225 aa9.39□□□□□ -0.91
TNFRSF9-201ENST00000377507 RP1L1Q8IWN7 2480 aaPredicted RBP9.38□□□□□ -0.91
TNFRSF9-201ENST00000377507 ARFGEF3Q5TH69 2177 aa9.38□□□□□ -0.91
TNFRSF9-201ENST00000377507 TRAV34A0A0B4J273 112 aa9.38□□□□□ -0.91
TNFRSF9-201ENST00000377507 A0A1W2PS18 150 aa9.38□□□□□ -0.91
TNFRSF9-201ENST00000377507 HYPMO75409 117 aa9.38□□□□□ -0.91
TNFRSF9-201ENST00000377507 APCSP02743 223 aa9.38□□□□□ -0.91
TNFRSF9-201ENST00000377507 NBEAP1P0C6P0 100 aa9.38□□□□□ -0.91
TNFRSF9-201ENST00000377507 GP9P14770 177 aa9.38□□□□□ -0.91
TNFRSF9-201ENST00000377507 CDKN1AP38936 164 aa9.38□□□□□ -0.91
TNFRSF9-201ENST00000377507 KIAA1644Q3SXP7 199 aa9.38□□□□□ -0.91
TNFRSF9-201ENST00000377507 FBXL19-AS1Q494R0 122 aa9.38□□□□□ -0.91
TNFRSF9-201ENST00000377507 SIGLECL1Q8N7X8 197 aa9.38□□□□□ -0.91
TNFRSF9-201ENST00000377507 Q8N976 141 aa9.38□□□□□ -0.91
TNFRSF9-201ENST00000377507 NUP35Q8NFH5 326 aa9.38□□□□□ -0.91
TNFRSF9-201ENST00000377507 OR1B1Q8NGR6 318 aa9.38□□□□□ -0.91
TNFRSF9-201ENST00000377507 TSKUQ8WUA8 353 aa9.38□□□□□ -0.91
TNFRSF9-201ENST00000377507 KCNS1Q96KK3 526 aa9.38□□□□□ -0.91
TNFRSF9-201ENST00000377507 SAMD10Q9BYL1 202 aa9.38□□□□□ -0.91
TNFRSF9-201ENST00000377507 ZNF331Q9NQX6 463 aaPredicted RBP9.38□□□□□ -0.91
TNFRSF9-201ENST00000377507 ZNF253O75346 499 aa9.37□□□□□ -0.91
TNFRSF9-201ENST00000377507 PLAUP00749 431 aa9.37□□□□□ -0.91
TNFRSF9-201ENST00000377507 HIST1H1EP10412 219 aaKnown RBP9.37□□□□□ -0.91
TNFRSF9-201ENST00000377507 SRIP30626 198 aa9.37□□□□□ -0.91
TNFRSF9-201ENST00000377507 USF2Q15853 346 aaPredicted RBP9.37□□□□□ -0.91
TNFRSF9-201ENST00000377507 TDRG1Q3Y452 100 aa9.37□□□□□ -0.91
TNFRSF9-201ENST00000377507 TOMM20LQ6UXN7 152 aa9.37□□□□□ -0.91
TNFRSF9-201ENST00000377507 GPR82Q96P67 336 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms