RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 BEND2Q8NDZ0 799 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 OR11H4Q8NGC9 324 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 PEMTQ9UBM1 199 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 TRAV14DV4A0A0A6YYC5 116 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 FOXI3A8MTJ6 420 aaPredicted RBP6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 ATP6V0E1O15342 81 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 SEC11BP0C7V7 166 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 ARL14EPLP0DKL9 152 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 CD81P60033 236 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 NDPQ00604 133 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 PRCDQ00LT1 54 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 CD69Q07108 199 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 GOLT1AQ6ZVE7 132 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 GATAD1Q8WUU5 269 aa6.86□□□□□ -1.31
CRNKL1-202ENST00000377340 IL6RP08887 468 aaPredicted RBP6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 ZFP36P26651 326 aaKnown RBP6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 TMEM177Q53S58 311 aa6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 FAM120AOSQ5T036 256 aa6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 C9orf62Q8N4C0 152 aa6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 RPRMQ9NS64 109 aa6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 BET1LQ9NYM9 111 aa6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 KAAG1Q9UBP8 84 aa6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 TCAPO15273 167 aa6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 NDUFB4O95168 129 aa6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 IGKV1-5P01602 117 aa6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 SYNJ2BPP57105 145 aa6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 DLK1P80370 383 aa6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 TMEM95Q3KNT9 176 aa6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 ZNF660Q6AZW8 331 aaPredicted RBP6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 CYYR1Q96J86 154 aa6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 J3QLI3 93 aa6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 P01737 135 aa6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 LDLRAD2Q5SZI1 272 aa6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 SLC35B3Q9H1N7 401 aa6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 SRD5A3Q9H8P0 318 aa6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 ELOA3CA0A087WX78 387 aaPredicted RBP6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 ZNF705FA8MVS1 300 aaPredicted RBP6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 NDUFS6O75380 124 aaKnown RBP6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 CFDP00746 253 aaPredicted RBP6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 NBEAP1P0C6P0 100 aa6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 ZNF705DP0CH99 300 aaPredicted RBP6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 ZNF705BP0CI00 300 aaPredicted RBP6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 MAS1LP35410 378 aa6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 LHFPL1Q86WI0 220 aa6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 OR2D3Q8NGH3 330 aa6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 TMPRSS5Q9H3S3 457 aa6.85□□□□□ -1.31
CRNKL1-202ENST00000377340 MGPP08493 103 aa6.84□□□□□ -1.31
CRNKL1-202ENST00000377340 BTCP35070 178 aa6.84□□□□□ -1.31
CRNKL1-202ENST00000377340 KRTAP10-9P60411 292 aa6.84□□□□□ -1.31
CRNKL1-202ENST00000377340 SRSF4Q08170 494 aaKnown RBP6.84□□□□□ -1.31
CRNKL1-202ENST00000377340 GUSBP1Q15486 140 aa6.84□□□□□ -1.31
CRNKL1-202ENST00000377340 SPANXN1Q5VSR9 72 aa6.84□□□□□ -1.31
CRNKL1-202ENST00000377340 RNASEH2CQ8TDP1 164 aaKnown RBP6.84□□□□□ -1.31
CRNKL1-202ENST00000377340 RNF125Q96EQ8 232 aa6.84□□□□□ -1.31
CRNKL1-202ENST00000377340 DUX3Q96PT4 197 aa6.84□□□□□ -1.31
CRNKL1-202ENST00000377340 VAX2Q9UIW0 290 aa6.84□□□□□ -1.31
CRNKL1-202ENST00000377340 CRYBB3P26998 211 aa6.84□□□□□ -1.31
CRNKL1-202ENST00000377340 NUTF2P61970 127 aaKnown RBP6.84□□□□□ -1.31
CRNKL1-202ENST00000377340 SUPT4H1P63272 117 aaKnown RBP6.84□□□□□ -1.31
CRNKL1-202ENST00000377340 BIVMQ86UB2 503 aa6.84□□□□□ -1.31
CRNKL1-202ENST00000377340 TMEM167AQ8TBQ9 72 aa6.84□□□□□ -1.31
CRNKL1-202ENST00000377340 CACNG8Q8WXS5 425 aa6.84□□□□□ -1.31
CRNKL1-202ENST00000377340 ARHGAP21Q5T5U3 1957 aa6.84□□□□□ -1.31
CRNKL1-202ENST00000377340 OVOL3O00110 214 aa6.84□□□□□ -1.31
CRNKL1-202ENST00000377340 IGLV3-1P01715 115 aa6.84□□□□□ -1.31
CRNKL1-202ENST00000377340 ATP5IP56385 69 aaPredicted RBP6.84□□□□□ -1.31
CRNKL1-202ENST00000377340 NPCDR1Q9BY65 106 aa6.84□□□□□ -1.31
CRNKL1-202ENST00000377340 TRBV6-6A0A0A6YYG2 114 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 A0A0B4J293 547 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 G3V3Q6 166 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 CSN3P07498 182 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 RPL15P61313 204 aaKnown RBP6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 BLCAPP62952 87 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 C19orf35Q6ZS72 473 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 PHYHIPLQ96FC7 376 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 RNF114Q9Y508 228 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 LRP4O75096 1905 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 RAB9AP51151 201 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 AARDQ4LEZ3 155 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 DGAT2L7PQ6IED9 249 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 ZNF880Q6PDB4 577 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 ZNF562Q6V9R5 426 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 Q6ZRM9 215 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 TMEM144Q7Z5S9 345 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 MANBALQ9NQG1 85 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 TPSG1Q9NRR2 321 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 JKAMPQ9P055 326 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 TRAV34A0A0B4J273 112 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 C9JCJ5 164 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 GGCTO75223 188 aaKnown RBP6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 ZNF688P0C7X2 276 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 BSXQ3C1V8 233 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 PDZD11Q5EBL8 140 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 MRPL54Q6P161 138 aaKnown RBP6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 KLHDC1Q8N7A1 406 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 AQP10Q96PS8 301 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 HSPB7Q9UBY9 170 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 A0A0G2JRQ6 117 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 CENPVL3A0A0U1RRI6 287 aa6.83□□□□□ -1.32
CRNKL1-202ENST00000377340 ID3Q02535 119 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms