RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 SLC25A17O43808 307 aa11.73□□□□□ -0.53
MSH5-201ENST00000375703 REG1AP05451 166 aa11.73□□□□□ -0.53
MSH5-201ENST00000375703 LINC00305Q7Z4B0 112 aa11.73□□□□□ -0.53
MSH5-201ENST00000375703 THAP8Q8NA92 274 aa11.73□□□□□ -0.53
MSH5-201ENST00000375703 CACNA1HO95180 2353 aa11.73□□□□□ -0.53
MSH5-201ENST00000375703 DIRC3C9JPN6 131 aa11.73□□□□□ -0.53
MSH5-201ENST00000375703 M0QZK8 103 aa11.73□□□□□ -0.53
MSH5-201ENST00000375703 PMCHP20382 165 aa11.73□□□□□ -0.53
MSH5-201ENST00000375703 VMA21Q3ZAQ7 101 aa11.73□□□□□ -0.53
MSH5-201ENST00000375703 ZNF596Q8TC21 504 aa11.73□□□□□ -0.53
MSH5-201ENST00000375703 FXYD5Q96DB9 178 aa11.73□□□□□ -0.53
MSH5-201ENST00000375703 RITA1Q96K30 269 aa11.73□□□□□ -0.53
MSH5-201ENST00000375703 PRRG2O14669 202 aa11.72□□□□□ -0.53
MSH5-201ENST00000375703 TNFRSF13BO14836 293 aaPredicted RBP11.72□□□□□ -0.53
MSH5-201ENST00000375703 ENSAO43768 121 aaKnown RBP11.72□□□□□ -0.53
MSH5-201ENST00000375703 PLAUP00749 431 aa11.72□□□□□ -0.53
MSH5-201ENST00000375703 FAM231DQ6ZW35 169 aa11.72□□□□□ -0.53
MSH5-201ENST00000375703 C8orf31Q8N9H6 132 aa11.72□□□□□ -0.53
MSH5-201ENST00000375703 NUDT10Q8NFP7 164 aa11.72□□□□□ -0.53
MSH5-201ENST00000375703 NUDT11Q96G61 164 aa11.72□□□□□ -0.53
MSH5-201ENST00000375703 FSTL3O95633 263 aa11.72□□□□□ -0.53
MSH5-201ENST00000375703 THBDP07204 575 aa11.72□□□□□ -0.53
MSH5-201ENST00000375703 ORM2P19652 201 aa11.72□□□□□ -0.53
MSH5-201ENST00000375703 MC5RP33032 325 aa11.72□□□□□ -0.53
MSH5-201ENST00000375703 TBR1Q16650 682 aa11.72□□□□□ -0.53
MSH5-201ENST00000375703 GRAMD2BQ96HH9 432 aa11.72□□□□□ -0.53
MSH5-201ENST00000375703 TPSG1Q9NRR2 321 aa11.72□□□□□ -0.53
MSH5-201ENST00000375703 OTOGLQ3ZCN5 2332 aa11.72□□□□□ -0.53
MSH5-201ENST00000375703 A0A1W2PPI3 338 aa11.71□□□□□ -0.53
MSH5-201ENST00000375703 KLK10O43240 276 aa11.71□□□□□ -0.53
MSH5-201ENST00000375703 ZNF324O75467 553 aaPredicted RBP11.71□□□□□ -0.53
MSH5-201ENST00000375703 PRR27Q6MZM9 219 aa11.71□□□□□ -0.53
MSH5-201ENST00000375703 ASCL5Q7RTU5 278 aa11.71□□□□□ -0.53
MSH5-201ENST00000375703 MBD6Q96DN6 1003 aa11.71□□□□□ -0.53
MSH5-201ENST00000375703 VSTM5A8MXK1 200 aa11.71□□□□□ -0.54
MSH5-201ENST00000375703 MFAP2P55001 183 aa11.71□□□□□ -0.54
MSH5-201ENST00000375703 SLAQ13239 276 aa11.71□□□□□ -0.54
MSH5-201ENST00000375703 HCP5Q6MZN7 132 aa11.71□□□□□ -0.54
MSH5-201ENST00000375703 Q8N976 141 aa11.71□□□□□ -0.54
MSH5-201ENST00000375703 NUP35Q8NFH5 326 aa11.71□□□□□ -0.54
MSH5-201ENST00000375703 TNFRSF19Q9NS68 423 aa11.71□□□□□ -0.54
MSH5-201ENST00000375703 CTSZQ9UBR2 303 aa11.71□□□□□ -0.54
MSH5-201ENST00000375703 IGHV3-72A0A0B4J1Y9 119 aa11.7□□□□□ -0.54
MSH5-201ENST00000375703 LOXP28300 417 aaPredicted RBP11.7□□□□□ -0.54
MSH5-201ENST00000375703 GNG5P63218 68 aa11.7□□□□□ -0.54
MSH5-201ENST00000375703 ETFRF1Q6IPR1 90 aa11.7□□□□□ -0.54
MSH5-201ENST00000375703 RASL11AQ6T310 242 aa11.7□□□□□ -0.54
MSH5-201ENST00000375703 OR1B1Q8NGR6 318 aa11.7□□□□□ -0.54
MSH5-201ENST00000375703 WIPF2Q8TF74 440 aaPredicted RBP11.7□□□□□ -0.54
MSH5-201ENST00000375703 TSKUQ8WUA8 353 aa11.7□□□□□ -0.54
MSH5-201ENST00000375703 BLNKQ8WV28 456 aa11.7□□□□□ -0.54
MSH5-201ENST00000375703 SH3BGRL2Q9UJC5 107 aa11.7□□□□□ -0.54
MSH5-201ENST00000375703 LGALS7P47929 136 aa11.7□□□□□ -0.54
MSH5-201ENST00000375703 UBE2G1P62253 170 aa11.7□□□□□ -0.54
MSH5-201ENST00000375703 MRPL52Q86TS9 123 aaKnown RBP11.7□□□□□ -0.54
MSH5-201ENST00000375703 FAM19A2Q8N3H0 131 aa11.7□□□□□ -0.54
MSH5-201ENST00000375703 OR4B1Q8NGF8 309 aa11.7□□□□□ -0.54
MSH5-201ENST00000375703 PERPQ96FX8 193 aa11.7□□□□□ -0.54
MSH5-201ENST00000375703 CHRDL1Q9BU40 450 aa11.7□□□□□ -0.54
MSH5-201ENST00000375703 EPDR1Q9UM22 224 aa11.7□□□□□ -0.54
MSH5-201ENST00000375703 PGPA6NDG6 321 aa11.69□□□□□ -0.54
MSH5-201ENST00000375703 C22orf46C9J442 243 aa11.69□□□□□ -0.54
MSH5-201ENST00000375703 MOSP00540 346 aa11.69□□□□□ -0.54
MSH5-201ENST00000375703 SLC25A5P05141 298 aaKnown RBP11.69□□□□□ -0.54
MSH5-201ENST00000375703 ZNF137PP52743 207 aa11.69□□□□□ -0.54
MSH5-201ENST00000375703 DLX6P56179 175 aa11.69□□□□□ -0.54
MSH5-201ENST00000375703 RUSC1-AS1Q66K80 236 aa11.69□□□□□ -0.54
MSH5-201ENST00000375703 LHFPL4Q7Z7J7 247 aa11.69□□□□□ -0.54
MSH5-201ENST00000375703 STXBP6Q8NFX7 210 aa11.69□□□□□ -0.54
MSH5-201ENST00000375703 CNOT1A5YKK6 2376 aaKnown RBP11.69□□□□□ -0.54
MSH5-201ENST00000375703 ARFGEF3Q5TH69 2177 aa11.69□□□□□ -0.54
MSH5-201ENST00000375703 SMG1Q96Q15 3661 aaKnown RBP11.69□□□□□ -0.54
MSH5-201ENST00000375703 IGHV1-8P0DP01 117 aa11.69□□□□□ -0.54
MSH5-201ENST00000375703 MYCNOSP40205 109 aa11.69□□□□□ -0.54
MSH5-201ENST00000375703 MRGPRG-AS1Q2M3A8 158 aa11.69□□□□□ -0.54
MSH5-201ENST00000375703 RNASE6Q93091 150 aaKnown RBP11.69□□□□□ -0.54
MSH5-201ENST00000375703 SGK494Q96LW2 274 aa11.69□□□□□ -0.54
MSH5-201ENST00000375703 LAMA5O15230 3695 aa11.69□□□□□ -0.54
MSH5-201ENST00000375703 HIST1H1EP10412 219 aaKnown RBP11.68□□□□□ -0.54
MSH5-201ENST00000375703 NTF3P20783 257 aa11.68□□□□□ -0.54
MSH5-201ENST00000375703 PRRX1P54821 245 aa11.68□□□□□ -0.54
MSH5-201ENST00000375703 TMEM155Q4W5P6 130 aa11.68□□□□□ -0.54
MSH5-201ENST00000375703 NIT1Q86X76 327 aa11.68□□□□□ -0.54
MSH5-201ENST00000375703 C18orf32Q8TCD1 76 aa11.68□□□□□ -0.54
MSH5-201ENST00000375703 RP1L1Q8IWN7 2480 aaPredicted RBP11.68□□□□□ -0.54
MSH5-201ENST00000375703 C3orf79P0CE67 100 aa11.68□□□□□ -0.54
MSH5-201ENST00000375703 SPACA3Q8IXA5 215 aa11.68□□□□□ -0.54
MSH5-201ENST00000375703 BORCS7Q96B45 105 aa11.68□□□□□ -0.54
MSH5-201ENST00000375703 IGLC7A0M8Q6 106 aa11.67□□□□□ -0.54
MSH5-201ENST00000375703 CORTO00230 105 aa11.67□□□□□ -0.54
MSH5-201ENST00000375703 RPLP1P05386 114 aaKnown RBP11.67□□□□□ -0.54
MSH5-201ENST00000375703 CRYGCP07315 174 aa11.67□□□□□ -0.54
MSH5-201ENST00000375703 NBEAP1P0C6P0 100 aa11.67□□□□□ -0.54
MSH5-201ENST00000375703 APELAP0DMC3 54 aa11.67□□□□□ -0.54
MSH5-201ENST00000375703 ZNF25P17030 456 aaPredicted RBP11.67□□□□□ -0.54
MSH5-201ENST00000375703 TNXAQ16473 311 aa11.67□□□□□ -0.54
MSH5-201ENST00000375703 GDF5OSQ5U4N7 250 aa11.67□□□□□ -0.54
MSH5-201ENST00000375703 TEX45Q8NA69 505 aa11.67□□□□□ -0.54
MSH5-201ENST00000375703 DYNLRB1Q9NP97 96 aa11.67□□□□□ -0.54
MSH5-201ENST00000375703 MRPL27Q9P0M9 148 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms