RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 FGF16O43320 207 aa14.69□□□□□ -0.06
PTPDC1-202ENST00000375360 FOXA3P55318 350 aaPredicted RBP14.69□□□□□ -0.06
PTPDC1-202ENST00000375360 JMJD1CQ15652 2540 aa14.68□□□□□ -0.06
PTPDC1-202ENST00000375360 BUB1B-PAK6H3BSN5 160 aa14.68□□□□□ -0.06
PTPDC1-202ENST00000375360 CKS2P33552 79 aa14.68□□□□□ -0.06
PTPDC1-202ENST00000375360 TEX29Q8N6K0 151 aa14.68□□□□□ -0.06
PTPDC1-202ENST00000375360 RNF125Q96EQ8 232 aa14.68□□□□□ -0.06
PTPDC1-202ENST00000375360 H3BUX3 64 aa14.68□□□□□ -0.06
PTPDC1-202ENST00000375360 ELOBQ15370 118 aa14.68□□□□□ -0.06
PTPDC1-202ENST00000375360 SLX1AQ9BQ83 275 aa14.68□□□□□ -0.06
PTPDC1-202ENST00000375360 CARHSP1Q9Y2V2 147 aaKnown RBP14.68□□□□□ -0.06
PTPDC1-202ENST00000375360 PAM16Q9Y3D7 125 aa14.68□□□□□ -0.06
PTPDC1-202ENST00000375360 GGCTO75223 188 aaKnown RBP14.67□□□□□ -0.06
PTPDC1-202ENST00000375360 MAS1LP35410 378 aa14.67□□□□□ -0.06
PTPDC1-202ENST00000375360 SPATA31B1PQ5VZV4 182 aa14.67□□□□□ -0.06
PTPDC1-202ENST00000375360 TMEM14EPQ6UXP3 125 aa14.67□□□□□ -0.06
PTPDC1-202ENST00000375360 SRIP30626 198 aa14.67□□□□□ -0.06
PTPDC1-202ENST00000375360 RAB9AP51151 201 aa14.67□□□□□ -0.06
PTPDC1-202ENST00000375360 TNCP24821 2201 aa14.67□□□□□ -0.06
PTPDC1-202ENST00000375360 TCRBV4S1A1TA0A5B7 111 aa14.67□□□□□ -0.06
PTPDC1-202ENST00000375360 TRGC1P0CF51 173 aa14.67□□□□□ -0.06
PTPDC1-202ENST00000375360 MKI67P46013 3256 aaKnown RBP14.67□□□□□ -0.06
PTPDC1-202ENST00000375360 IGLV3-9A0A075B6K5 115 aa14.67□□□□□ -0.06
PTPDC1-202ENST00000375360 HLA-DRB1P01911 266 aa14.67□□□□□ -0.06
PTPDC1-202ENST00000375360 AREGP15514 252 aa14.67□□□□□ -0.06
PTPDC1-202ENST00000375360 MARVELD3Q96A59 401 aa14.67□□□□□ -0.06
PTPDC1-202ENST00000375360 HSPB9Q9BQS6 159 aa14.67□□□□□ -0.06
PTPDC1-202ENST00000375360 Q9H3A6 140 aa14.67□□□□□ -0.06
PTPDC1-202ENST00000375360 SEPSECSQ9HD40 501 aaKnown RBP14.67□□□□□ -0.06
PTPDC1-202ENST00000375360 PHLDA3Q9Y5J5 127 aa14.67□□□□□ -0.06
PTPDC1-202ENST00000375360 ZNF257Q9Y2Q1 563 aa14.66□□□□□ -0.06
PTPDC1-202ENST00000375360 DDB2Q92466 427 aa14.66□□□□□ -0.06
PTPDC1-202ENST00000375360 FGF23Q9GZV9 251 aaPredicted RBP14.66□□□□□ -0.06
PTPDC1-202ENST00000375360 MED12LQ86YW9 2145 aa14.66□□□□□ -0.06
PTPDC1-202ENST00000375360 TMEM183BQ1AE95 376 aa14.65□□□□□ -0.06
PTPDC1-202ENST00000375360 SDF2L1Q9HCN8 221 aa14.65□□□□□ -0.06
PTPDC1-202ENST00000375360 CXorf65A6NEN9 183 aa14.65□□□□□ -0.06
PTPDC1-202ENST00000375360 TMEM50AO95807 157 aa14.65□□□□□ -0.06
PTPDC1-202ENST00000375360 HLA-DQA1P01909 254 aa14.65□□□□□ -0.06
PTPDC1-202ENST00000375360 MT-ND6P03923 174 aa14.65□□□□□ -0.06
PTPDC1-202ENST00000375360 SMUG1Q53HV7 270 aa14.65□□□□□ -0.06
PTPDC1-202ENST00000375360 TMEM167AQ8TBQ9 72 aa14.65□□□□□ -0.06
PTPDC1-202ENST00000375360 IMMP2LQ96T52 175 aa14.65□□□□□ -0.06
PTPDC1-202ENST00000375360 RNASE7Q9H1E1 156 aaKnown RBP14.65□□□□□ -0.06
PTPDC1-202ENST00000375360 SIGLEC9Q9Y336 463 aa14.65□□□□□ -0.06
PTPDC1-202ENST00000375360 CEACAM4O75871 244 aa14.65□□□□□ -0.06
PTPDC1-202ENST00000375360 CCKARP32238 428 aa14.65□□□□□ -0.06
PTPDC1-202ENST00000375360 GATA4P43694 442 aa14.65□□□□□ -0.06
PTPDC1-202ENST00000375360 SP5Q6BEB4 398 aaPredicted RBP14.65□□□□□ -0.06
PTPDC1-202ENST00000375360 B4DSR2 109 aa14.65□□□□□ -0.06
PTPDC1-202ENST00000375360 RPL23P62829 140 aaKnown RBP14.65□□□□□ -0.06
PTPDC1-202ENST00000375360 NPFFR1Q9GZQ6 430 aa14.65□□□□□ -0.06
PTPDC1-202ENST00000375360 C2CD3Q4AC94 2353 aa14.65□□□□□ -0.06
PTPDC1-202ENST00000375360 C15orf32Q32M92 178 aa14.64□□□□□ -0.07
PTPDC1-202ENST00000375360 ZNF329Q86UD4 541 aa14.64□□□□□ -0.07
PTPDC1-202ENST00000375360 C15orf62A8K5M9 175 aa14.64□□□□□ -0.07
PTPDC1-202ENST00000375360 C5orf64Q2M2E5 130 aa14.64□□□□□ -0.07
PTPDC1-202ENST00000375360 SPRNQ5BIV9 151 aa14.64□□□□□ -0.07
PTPDC1-202ENST00000375360 ZNF841Q6ZN19 808 aa14.64□□□□□ -0.07
PTPDC1-202ENST00000375360 GLMPQ8WWB7 406 aa14.64□□□□□ -0.07
PTPDC1-202ENST00000375360 VENTXO95231 258 aa14.64□□□□□ -0.07
PTPDC1-202ENST00000375360 PSG1P11464 419 aa14.64□□□□□ -0.07
PTPDC1-202ENST00000375360 SRD5A1P18405 259 aa14.64□□□□□ -0.07
PTPDC1-202ENST00000375360 SAA4P35542 130 aa14.64□□□□□ -0.07
PTPDC1-202ENST00000375360 FAM74A4Q5TZK3 123 aa14.64□□□□□ -0.07
PTPDC1-202ENST00000375360 EML6Q6ZMW3 1958 aa14.64□□□□□ -0.07
PTPDC1-202ENST00000375360 FAM90A9PA6NNJ1 464 aa14.64□□□□□ -0.07
PTPDC1-202ENST00000375360 OR1P1Q8NH06 330 aa14.64□□□□□ -0.07
PTPDC1-202ENST00000375360 TMEM191AQ9H0A3 160 aa14.64□□□□□ -0.07
PTPDC1-202ENST00000375360 NAV3Q8IVL0 2385 aa14.63□□□□□ -0.07
PTPDC1-202ENST00000375360 CD99P14209 185 aa14.63□□□□□ -0.07
PTPDC1-202ENST00000375360 PRTN3P24158 256 aa14.63□□□□□ -0.07
PTPDC1-202ENST00000375360 ZNF134P52741 427 aa14.63□□□□□ -0.07
PTPDC1-202ENST00000375360 LOXP28300 417 aaPredicted RBP14.63□□□□□ -0.07
PTPDC1-202ENST00000375360 TMEM155Q4W5P6 130 aa14.63□□□□□ -0.07
PTPDC1-202ENST00000375360 C2orf83Q53S99 150 aa14.63□□□□□ -0.07
PTPDC1-202ENST00000375360 MAP1LC3CQ9BXW4 147 aa14.63□□□□□ -0.07
PTPDC1-202ENST00000375360 IFT22Q9H7X7 185 aa14.63□□□□□ -0.07
PTPDC1-202ENST00000375360 SNRPD3P62318 126 aaKnown RBP14.63□□□□□ -0.07
PTPDC1-202ENST00000375360 BTF3P20290 206 aaKnown RBP14.62□□□□□ -0.07
PTPDC1-202ENST00000375360 MGST2Q99735 147 aa14.62□□□□□ -0.07
PTPDC1-202ENST00000375360 FASNP49327 2511 aaKnown RBP14.62□□□□□ -0.07
PTPDC1-202ENST00000375360 GCGP01275 180 aa14.62□□□□□ -0.07
PTPDC1-202ENST00000375360 SOD3P08294 240 aa14.62□□□□□ -0.07
PTPDC1-202ENST00000375360 SAPCD1Q5SSQ6 148 aa14.62□□□□□ -0.07
PTPDC1-202ENST00000375360 Q6ZN92 141 aa14.62□□□□□ -0.07
PTPDC1-202ENST00000375360 SEM1Q6ZVN7 128 aa14.62□□□□□ -0.07
PTPDC1-202ENST00000375360 EIF4E3Q8N5X7 224 aaKnown RBP14.62□□□□□ -0.07
PTPDC1-202ENST00000375360 ZNF98A6NK75 572 aa14.62□□□□□ -0.07
PTPDC1-202ENST00000375360 NPFFO15130 113 aa14.62□□□□□ -0.07
PTPDC1-202ENST00000375360 PF4P02776 101 aa14.62□□□□□ -0.07
PTPDC1-202ENST00000375360 TBX15Q96SF7 602 aa14.62□□□□□ -0.07
PTPDC1-202ENST00000375360 COL4A4P53420 1690 aaPredicted RBP14.62□□□□□ -0.07
PTPDC1-202ENST00000375360 C9JCJ5 164 aa14.62□□□□□ -0.07
PTPDC1-202ENST00000375360 PRB1P04280 392 aa14.62□□□□□ -0.07
PTPDC1-202ENST00000375360 C17orf58Q2M2W7 97 aa14.62□□□□□ -0.07
PTPDC1-202ENST00000375360 PRSS22Q9GZN4 317 aa14.62□□□□□ -0.07
PTPDC1-202ENST00000375360 IGKV1-39P01597 117 aa14.61□□□□□ -0.07
PTPDC1-202ENST00000375360 IGKV1D-39P04432 117 aa14.61□□□□□ -0.07
PTPDC1-202ENST00000375360 CNTFRP26992 372 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms