RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 POLEQ07864 2286 aa12.22□□□□□ -0.45
NOTCH4-201ENST00000375023 ORMDL3Q8N138 153 aa12.22□□□□□ -0.45
NOTCH4-201ENST00000375023 ZNF319Q9P2F9 582 aa12.22□□□□□ -0.45
NOTCH4-201ENST00000375023 ZNF257Q9Y2Q1 563 aa12.22□□□□□ -0.45
NOTCH4-201ENST00000375023 TRBV9A0A0B4J1U6 114 aa12.22□□□□□ -0.45
NOTCH4-201ENST00000375023 LINC00205P59089 165 aa12.22□□□□□ -0.45
NOTCH4-201ENST00000375023 ZNF474Q6S9Z5 364 aaPredicted RBP12.22□□□□□ -0.45
NOTCH4-201ENST00000375023 TNS1Q9HBL0 1735 aaKnown RBP12.22□□□□□ -0.45
NOTCH4-201ENST00000375023 H3BUT2 72 aa12.21□□□□□ -0.45
NOTCH4-201ENST00000375023 UPK2O00526 184 aa12.21□□□□□ -0.45
NOTCH4-201ENST00000375023 NCR2O95944 276 aa12.21□□□□□ -0.45
NOTCH4-201ENST00000375023 SRP19P09132 144 aaKnown RBP12.21□□□□□ -0.45
NOTCH4-201ENST00000375023 COL5A3P25940 1745 aaPredicted RBP12.21□□□□□ -0.45
NOTCH4-201ENST00000375023 RBBP6Q7Z6E9 1792 aaKnown RBP12.21□□□□□ -0.45
NOTCH4-201ENST00000375023 ATRAIDQ6UW56 229 aa12.21□□□□□ -0.45
NOTCH4-201ENST00000375023 NHP2Q9NX24 153 aaKnown RBP12.21□□□□□ -0.45
NOTCH4-201ENST00000375023 PSME4Q14997 1843 aa12.21□□□□□ -0.45
NOTCH4-201ENST00000375023 COL24A1Q17RW2 1714 aa12.21□□□□□ -0.45
NOTCH4-201ENST00000375023 FAM186AA6NE01 2351 aa12.21□□□□□ -0.46
NOTCH4-201ENST00000375023 SERF1AO75920 110 aa12.21□□□□□ -0.46
NOTCH4-201ENST00000375023 FOXL1Q12952 345 aa12.21□□□□□ -0.46
NOTCH4-201ENST00000375023 EXOC3-AS1Q8N2X6 119 aa12.21□□□□□ -0.46
NOTCH4-201ENST00000375023 PAQR4Q8N4S7 273 aaPredicted RBP12.21□□□□□ -0.46
NOTCH4-201ENST00000375023 SDK2Q58EX2 2172 aa12.21□□□□□ -0.46
NOTCH4-201ENST00000375023 ADARB2-AS1A8MUL3 147 aa12.21□□□□□ -0.46
NOTCH4-201ENST00000375023 IGHV1-46P01743 117 aa12.2□□□□□ -0.46
NOTCH4-201ENST00000375023 LINC00158P58513 81 aa12.2□□□□□ -0.46
NOTCH4-201ENST00000375023 NAA38Q9BRA0 125 aaKnown RBP12.2□□□□□ -0.46
NOTCH4-201ENST00000375023 A0A0A6YYD4 124 aa12.2□□□□□ -0.46
NOTCH4-201ENST00000375023 TRAV8-2A0A0B4J237 113 aa12.2□□□□□ -0.46
NOTCH4-201ENST00000375023 CA7P43166 264 aa12.2□□□□□ -0.46
NOTCH4-201ENST00000375023 RUSC1-AS1Q66K80 236 aa12.2□□□□□ -0.46
NOTCH4-201ENST00000375023 PSMG3Q9BT73 122 aaPredicted RBP12.2□□□□□ -0.46
NOTCH4-201ENST00000375023 RFNGQ9Y644 331 aa12.2□□□□□ -0.46
NOTCH4-201ENST00000375023 CEACAM8P31997 349 aaPredicted RBP12.2□□□□□ -0.46
NOTCH4-201ENST00000375023 IFI27P40305 119 aaPredicted RBP12.2□□□□□ -0.46
NOTCH4-201ENST00000375023 GREB1Q4ZG55 1949 aa12.2□□□□□ -0.46
NOTCH4-201ENST00000375023 CD300EQ496F6 205 aaPredicted RBP12.2□□□□□ -0.46
NOTCH4-201ENST00000375023 ACTL10Q5JWF8 245 aa12.2□□□□□ -0.46
NOTCH4-201ENST00000375023 SIGLEC15Q6ZMC9 328 aa12.2□□□□□ -0.46
NOTCH4-201ENST00000375023 IGKV1D-8A0A087WSZ0 117 aa12.19□□□□□ -0.46
NOTCH4-201ENST00000375023 IZUMO1RA6ND01 250 aa12.19□□□□□ -0.46
NOTCH4-201ENST00000375023 CSRP1P21291 193 aaKnown RBP12.19□□□□□ -0.46
NOTCH4-201ENST00000375023 SPATA31B1PQ5VZV4 182 aa12.19□□□□□ -0.46
NOTCH4-201ENST00000375023 SPCS1Q9Y6A9 102 aa12.19□□□□□ -0.46
NOTCH4-201ENST00000375023 CACNA1DQ01668 2161 aa12.19□□□□□ -0.46
NOTCH4-201ENST00000375023 PAX8Q06710 450 aa12.19□□□□□ -0.46
NOTCH4-201ENST00000375023 A0A087WX48 190 aa12.19□□□□□ -0.46
NOTCH4-201ENST00000375023 A0A096LPF7 62 aa12.19□□□□□ -0.46
NOTCH4-201ENST00000375023 A0A1B0GTI1 187 aa12.19□□□□□ -0.46
NOTCH4-201ENST00000375023 HBDP02042 147 aa12.19□□□□□ -0.46
NOTCH4-201ENST00000375023 FABP5P3A8MUU1 101 aa12.19□□□□□ -0.46
NOTCH4-201ENST00000375023 RPL23P62829 140 aaKnown RBP12.19□□□□□ -0.46
NOTCH4-201ENST00000375023 ZNF497Q6ZNH5 498 aa12.19□□□□□ -0.46
NOTCH4-201ENST00000375023 PAX1P15863 534 aa12.19□□□□□ -0.46
NOTCH4-201ENST00000375023 MRPL14Q6P1L8 145 aaKnown RBP12.19□□□□□ -0.46
NOTCH4-201ENST00000375023 C18orf12Q96KH6 178 aa12.19□□□□□ -0.46
NOTCH4-201ENST00000375023 IGKV1-9A0A0C4DH69 117 aa12.18□□□□□ -0.46
NOTCH4-201ENST00000375023 F5H768 121 aa12.18□□□□□ -0.46
NOTCH4-201ENST00000375023 CD8AP01732 235 aa12.18□□□□□ -0.46
NOTCH4-201ENST00000375023 OTORQ9NRC9 128 aa12.18□□□□□ -0.46
NOTCH4-201ENST00000375023 PEF1Q9UBV8 284 aaKnown RBP12.18□□□□□ -0.46
NOTCH4-201ENST00000375023 C15orf61A6NNL5 157 aa12.18□□□□□ -0.46
NOTCH4-201ENST00000375023 H3BUX3 64 aa12.18□□□□□ -0.46
NOTCH4-201ENST00000375023 SLC25A20O43772 301 aa12.18□□□□□ -0.46
NOTCH4-201ENST00000375023 PI4KAP42356 2102 aa12.18□□□□□ -0.46
NOTCH4-201ENST00000375023 UCP1P25874 307 aa12.18□□□□□ -0.46
NOTCH4-201ENST00000375023 DTX2Q86UW9 622 aa12.18□□□□□ -0.46
NOTCH4-201ENST00000375023 NEUROG1Q92886 237 aa12.18□□□□□ -0.46
NOTCH4-201ENST00000375023 RPUSD1Q9UJJ7 312 aaKnown RBP12.18□□□□□ -0.46
NOTCH4-201ENST00000375023 TMEM249Q2WGJ8 235 aa12.18□□□□□ -0.46
NOTCH4-201ENST00000375023 ZNF672Q499Z4 452 aaPredicted RBP12.18□□□□□ -0.46
NOTCH4-201ENST00000375023 RNF114Q9Y508 228 aa12.18□□□□□ -0.46
NOTCH4-201ENST00000375023 YLPM1P49750 1951 aaKnown RBP12.17□□□□□ -0.46
NOTCH4-201ENST00000375023 WNT2P09544 360 aa12.17□□□□□ -0.46
NOTCH4-201ENST00000375023 CD59P13987 128 aa12.17□□□□□ -0.46
NOTCH4-201ENST00000375023 GATD1Q8NB37 220 aa12.17□□□□□ -0.46
NOTCH4-201ENST00000375023 SCRT1Q9BWW7 348 aa12.17□□□□□ -0.46
NOTCH4-201ENST00000375023 PMS2P5A8MQ11 134 aa12.17□□□□□ -0.46
NOTCH4-201ENST00000375023 NR2C2APQ86WQ0 139 aa12.17□□□□□ -0.46
NOTCH4-201ENST00000375023 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.17□□□□□ -0.46
NOTCH4-201ENST00000375023 PSG8Q9UQ74 426 aa12.17□□□□□ -0.46
NOTCH4-201ENST00000375023 SCN4AP35499 1836 aa12.17□□□□□ -0.46
NOTCH4-201ENST00000375023 SLC25A39Q9BZJ4 359 aaPredicted RBP12.17□□□□□ -0.46
NOTCH4-201ENST00000375023 EPDR1Q9UM22 224 aa12.17□□□□□ -0.46
NOTCH4-201ENST00000375023 CHTOPQ9Y3Y2 248 aaKnown RBP12.17□□□□□ -0.46
NOTCH4-201ENST00000375023 IGLV2-23P01705 113 aa12.17□□□□□ -0.46
NOTCH4-201ENST00000375023 C1orf122Q6ZSJ8 110 aa12.17□□□□□ -0.46
NOTCH4-201ENST00000375023 WFDC1Q9HC57 220 aa12.17□□□□□ -0.46
NOTCH4-201ENST00000375023 TRGV1A0A0A0MS02 117 aa12.17□□□□□ -0.46
NOTCH4-201ENST00000375023 C15orf32Q32M92 178 aa12.17□□□□□ -0.46
NOTCH4-201ENST00000375023 TMEM30BQ3MIR4 351 aa12.17□□□□□ -0.46
NOTCH4-201ENST00000375023 TMEM200BQ69YZ2 307 aa12.17□□□□□ -0.46
NOTCH4-201ENST00000375023 PHLDA1Q8WV24 401 aaPredicted RBP12.17□□□□□ -0.46
NOTCH4-201ENST00000375023 TRIOBPQ9H2D6 2365 aa12.17□□□□□ -0.46
NOTCH4-201ENST00000375023 SBF2Q86WG5 1849 aa12.16□□□□□ -0.46
NOTCH4-201ENST00000375023 THSD7AQ9UPZ6 1657 aa12.16□□□□□ -0.46
NOTCH4-201ENST00000375023 CIARTQ8N365 385 aaPredicted RBP12.16□□□□□ -0.46
NOTCH4-201ENST00000375023 MEGF9Q9H1U4 602 aa12.16□□□□□ -0.46
NOTCH4-201ENST00000375023 BRCA1P38398 1863 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms