RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 ITLN2Q8WWU7 325 aaPredicted RBP16.52■□□□□ 0.23
COL15A1-201ENST00000375001 TRBV6-7A0A0A0MS04 114 aa16.52■□□□□ 0.23
COL15A1-201ENST00000375001 NCR2O95944 276 aa16.52■□□□□ 0.23
COL15A1-201ENST00000375001 RAMP3O60896 148 aa16.51■□□□□ 0.23
COL15A1-201ENST00000375001 IGKV1D-33P01593 117 aa16.51■□□□□ 0.23
COL15A1-201ENST00000375001 IGKV1-33P01594 117 aa16.51■□□□□ 0.23
COL15A1-201ENST00000375001 LGALS1P09382 135 aaKnown RBP16.51■□□□□ 0.23
COL15A1-201ENST00000375001 PSG3Q16557 428 aa16.51■□□□□ 0.23
COL15A1-201ENST00000375001 CDCP2Q5VXM1 449 aa16.51■□□□□ 0.23
COL15A1-201ENST00000375001 FAM216BQ8N7L0 139 aa16.51■□□□□ 0.23
COL15A1-201ENST00000375001 LINC01587Q99440 93 aa16.51■□□□□ 0.23
COL15A1-201ENST00000375001 SCN10AQ9Y5Y9 1956 aa16.51■□□□□ 0.23
COL15A1-201ENST00000375001 LINC01551Q86U37 167 aa16.5■□□□□ 0.23
COL15A1-201ENST00000375001 GATD1Q8NB37 220 aa16.5■□□□□ 0.23
COL15A1-201ENST00000375001 CST9LQ9H4G1 147 aa16.5■□□□□ 0.23
COL15A1-201ENST00000375001 TMPRSS3P57727 454 aa16.5■□□□□ 0.23
COL15A1-201ENST00000375001 TMEM42Q69YG0 159 aa16.5■□□□□ 0.23
COL15A1-201ENST00000375001 CENPVQ7Z7K6 275 aaPredicted RBP16.5■□□□□ 0.23
COL15A1-201ENST00000375001 ZNF703Q9H7S9 590 aaPredicted RBP16.5■□□□□ 0.23
COL15A1-201ENST00000375001 GFRA3O60609 400 aa16.5■□□□□ 0.23
COL15A1-201ENST00000375001 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.5■□□□□ 0.23
COL15A1-201ENST00000375001 TMEM238C9JI98 176 aa16.5■□□□□ 0.23
COL15A1-201ENST00000375001 CD5LO43866 347 aa16.5■□□□□ 0.23
COL15A1-201ENST00000375001 SCRT1Q9BWW7 348 aa16.5■□□□□ 0.23
COL15A1-201ENST00000375001 SPAARA0A1B0GVQ0 90 aa16.49■□□□□ 0.23
COL15A1-201ENST00000375001 MALP21145 153 aa16.49■□□□□ 0.23
COL15A1-201ENST00000375001 MRPL52Q86TS9 123 aaKnown RBP16.49■□□□□ 0.23
COL15A1-201ENST00000375001 EPOPA6NHQ4 379 aa16.49■□□□□ 0.23
COL15A1-201ENST00000375001 D6R8Y8 96 aa16.49■□□□□ 0.23
COL15A1-201ENST00000375001 CCL1P22362 96 aa16.49■□□□□ 0.23
COL15A1-201ENST00000375001 NYNRINQ9P2P1 1898 aaKnown RBP16.49■□□□□ 0.23
COL15A1-201ENST00000375001 MCRIP2Q9BUT9 160 aaKnown RBP16.49■□□□□ 0.23
COL15A1-201ENST00000375001 WDR83OSQ9Y284 106 aa16.49■□□□□ 0.23
COL15A1-201ENST00000375001 CHD5Q8TDI0 1954 aa16.49■□□□□ 0.23
COL15A1-201ENST00000375001 UPK2O00526 184 aa16.49■□□□□ 0.23
COL15A1-201ENST00000375001 KLF17Q5JT82 389 aaPredicted RBP16.49■□□□□ 0.23
COL15A1-201ENST00000375001 C9orf153Q5TBE3 101 aa16.49■□□□□ 0.23
COL15A1-201ENST00000375001 CRPP02741 224 aa16.48■□□□□ 0.23
COL15A1-201ENST00000375001 LAGE3Q14657 143 aa16.48■□□□□ 0.23
COL15A1-201ENST00000375001 TRGV2A0A075B6R0 118 aa16.48■□□□□ 0.23
COL15A1-201ENST00000375001 A8MWP6 167 aa16.48■□□□□ 0.23
COL15A1-201ENST00000375001 PPP1R27Q86WC6 154 aa16.48■□□□□ 0.23
COL15A1-201ENST00000375001 ZNF837Q96EG3 531 aaPredicted RBP16.48■□□□□ 0.23
COL15A1-201ENST00000375001 DPM3Q9P2X0 92 aa16.48■□□□□ 0.23
COL15A1-201ENST00000375001 C15orf61A6NNL5 157 aa16.48■□□□□ 0.23
COL15A1-201ENST00000375001 RFPL3SP0C7P2 107 aa16.48■□□□□ 0.23
COL15A1-201ENST00000375001 ARPC1AQ92747 370 aa16.48■□□□□ 0.23
COL15A1-201ENST00000375001 LINC00158P58513 81 aa16.47■□□□□ 0.23
COL15A1-201ENST00000375001 BMPERQ8N8U9 685 aa16.47■□□□□ 0.23
COL15A1-201ENST00000375001 IGKV1D-8A0A087WSZ0 117 aa16.47■□□□□ 0.23
COL15A1-201ENST00000375001 TCRBV4S1A1TA0A5B7 111 aa16.47■□□□□ 0.23
COL15A1-201ENST00000375001 SYS1-DBNDD2H3BUS1 97 aa16.47■□□□□ 0.23
COL15A1-201ENST00000375001 J3QW42 95 aa16.47■□□□□ 0.23
COL15A1-201ENST00000375001 FAM89BQ8N5H3 189 aa16.47■□□□□ 0.23
COL15A1-201ENST00000375001 TNFRSF14Q92956 283 aa16.47■□□□□ 0.23
COL15A1-201ENST00000375001 RFNGQ9Y644 331 aa16.47■□□□□ 0.23
COL15A1-201ENST00000375001 LHFPL4Q7Z7J7 247 aa16.47■□□□□ 0.23
COL15A1-201ENST00000375001 TET1Q8NFU7 2136 aa16.47■□□□□ 0.23
COL15A1-201ENST00000375001 SAP25Q8TEE9 199 aa16.47■□□□□ 0.23
COL15A1-201ENST00000375001 RNF125Q96EQ8 232 aa16.47■□□□□ 0.23
COL15A1-201ENST00000375001 CHCHD2Q9Y6H1 151 aaPredicted RBP16.47■□□□□ 0.23
COL15A1-201ENST00000375001 DOPEY2Q9Y3R5 2298 aa16.46■□□□□ 0.23
COL15A1-201ENST00000375001 A0A1W2PR77 199 aa16.46■□□□□ 0.23
COL15A1-201ENST00000375001 A0A1B0GW64 132 aa16.46■□□□□ 0.23
COL15A1-201ENST00000375001 PAQR4Q8N4S7 273 aaPredicted RBP16.46■□□□□ 0.23
COL15A1-201ENST00000375001 DEFB104AQ8WTQ1 72 aa16.46■□□□□ 0.23
COL15A1-201ENST00000375001 SAA2-SAA4A0A096LPE2 208 aa16.46■□□□□ 0.23
COL15A1-201ENST00000375001 TRAV8-3A0A0A6YYJ7 113 aa16.46■□□□□ 0.23
COL15A1-201ENST00000375001 TM4SF5O14894 197 aa16.46■□□□□ 0.23
COL15A1-201ENST00000375001 SAA2P0DJI9 122 aaPredicted RBP16.46■□□□□ 0.23
COL15A1-201ENST00000375001 SDK2Q58EX2 2172 aa16.46■□□□□ 0.22
COL15A1-201ENST00000375001 ZNF625Q96I27 306 aaPredicted RBP16.46■□□□□ 0.22
COL15A1-201ENST00000375001 TOMM40O96008 361 aa16.45■□□□□ 0.22
COL15A1-201ENST00000375001 LCNL1Q6ZST4 164 aa16.45■□□□□ 0.22
COL15A1-201ENST00000375001 SLC25A48Q6ZT89 311 aaKnown RBP16.45■□□□□ 0.22
COL15A1-201ENST00000375001 RNF115Q9Y4L5 304 aa16.45■□□□□ 0.22
COL15A1-201ENST00000375001 PDCD11Q14690 1871 aaKnown RBP16.45■□□□□ 0.22
COL15A1-201ENST00000375001 MORN3Q6PF18 240 aaPredicted RBP16.45■□□□□ 0.22
COL15A1-201ENST00000375001 TMEM86BQ8N661 226 aa16.45■□□□□ 0.22
COL15A1-201ENST00000375001 SNHG12Q9BXW3 62 aa16.45■□□□□ 0.22
COL15A1-201ENST00000375001 GREB1Q4ZG55 1949 aa16.45■□□□□ 0.22
COL15A1-201ENST00000375001 BRCA1P38398 1863 aaKnown RBP16.45■□□□□ 0.22
COL15A1-201ENST00000375001 SPATA31B1PQ5VZV4 182 aa16.45■□□□□ 0.22
COL15A1-201ENST00000375001 NPSP0C0P6 89 aa16.45■□□□□ 0.22
COL15A1-201ENST00000375001 OR9G9P0C7N8 305 aa16.45■□□□□ 0.22
COL15A1-201ENST00000375001 PATJQ8NI35 1801 aa16.45■□□□□ 0.22
COL15A1-201ENST00000375001 IGKV1-9A0A0C4DH69 117 aa16.44■□□□□ 0.22
COL15A1-201ENST00000375001 PDLIM4P50479 330 aa16.44■□□□□ 0.22
COL15A1-201ENST00000375001 KIF26BQ2KJY2 2108 aa16.44■□□□□ 0.22
COL15A1-201ENST00000375001 C9JAW5 83 aa16.44■□□□□ 0.22
COL15A1-201ENST00000375001 SCN8AQ9UQD0 1980 aa16.44■□□□□ 0.22
COL15A1-201ENST00000375001 TRAV1-1A0A0B4J248 108 aa16.44■□□□□ 0.22
COL15A1-201ENST00000375001 IGHV3-11P01762 117 aa16.44■□□□□ 0.22
COL15A1-201ENST00000375001 ZNF138P52744 262 aa16.44■□□□□ 0.22
COL15A1-201ENST00000375001 SLC50A1Q9BRV3 221 aa16.44■□□□□ 0.22
COL15A1-201ENST00000375001 REPIN1Q9BWE0 567 aaKnown RBP16.44■□□□□ 0.22
COL15A1-201ENST00000375001 ZNF319Q9P2F9 582 aa16.44■□□□□ 0.22
COL15A1-201ENST00000375001 LCTP09848 1927 aa16.44■□□□□ 0.22
COL15A1-201ENST00000375001 HGFACQ04756 655 aa16.44■□□□□ 0.22
COL15A1-201ENST00000375001 F2Z2F3 143 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms