RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 AMY1AP04745 511 aa13.69□□□□□ -0.22
PHF1-202ENST00000374516 PCP4P48539 62 aa13.69□□□□□ -0.22
PHF1-202ENST00000374516 HSPE1P61604 102 aaKnown RBP13.69□□□□□ -0.22
PHF1-202ENST00000374516 MRPL54Q6P161 138 aaKnown RBP13.69□□□□□ -0.22
PHF1-202ENST00000374516 MUC15Q8N387 334 aa13.69□□□□□ -0.22
PHF1-202ENST00000374516 FAM19A2Q8N3H0 131 aa13.69□□□□□ -0.22
PHF1-202ENST00000374516 TSKUQ8WUA8 353 aa13.69□□□□□ -0.22
PHF1-202ENST00000374516 DDB2Q92466 427 aa13.69□□□□□ -0.22
PHF1-202ENST00000374516 WNT10AQ9GZT5 417 aa13.69□□□□□ -0.22
PHF1-202ENST00000374516 SMIM27A0A1W2PRY6 76 aa13.69□□□□□ -0.22
PHF1-202ENST00000374516 HNRNPA3P51991 378 aaKnown RBP13.69□□□□□ -0.22
PHF1-202ENST00000374516 ZNF503Q96F45 646 aa13.69□□□□□ -0.22
PHF1-202ENST00000374516 NABP2Q9BQ15 211 aa13.69□□□□□ -0.22
PHF1-202ENST00000374516 LINC00574Q9H8X3 128 aa13.69□□□□□ -0.22
PHF1-202ENST00000374516 CDC42EP3Q9UKI2 254 aa13.69□□□□□ -0.22
PHF1-202ENST00000374516 TET2Q6N021 2002 aaPredicted RBP13.69□□□□□ -0.22
PHF1-202ENST00000374516 HIVEP3Q5T1R4 2406 aa13.68□□□□□ -0.22
PHF1-202ENST00000374516 ITGB1BP1O14713 200 aa13.68□□□□□ -0.22
PHF1-202ENST00000374516 NDUFB3O43676 98 aa13.68□□□□□ -0.22
PHF1-202ENST00000374516 IGLV2-8P01709 118 aa13.68□□□□□ -0.22
PHF1-202ENST00000374516 KIR2DS2P43631 304 aa13.68□□□□□ -0.22
PHF1-202ENST00000374516 C21orf62-AS1Q17RA5 79 aa13.68□□□□□ -0.22
PHF1-202ENST00000374516 C19orf35Q6ZS72 473 aa13.68□□□□□ -0.22
PHF1-202ENST00000374516 FAM216AQ8WUB2 273 aa13.68□□□□□ -0.22
PHF1-202ENST00000374516 ENY2Q9NPA8 101 aa13.68□□□□□ -0.22
PHF1-202ENST00000374516 TMEM14BQ9NUH8 114 aa13.68□□□□□ -0.22
PHF1-202ENST00000374516 TECRQ9NZ01 308 aaKnown RBP13.68□□□□□ -0.22
PHF1-202ENST00000374516 CACNA1AO00555 2505 aa13.68□□□□□ -0.22
PHF1-202ENST00000374516 TNFRSF13BO14836 293 aaPredicted RBP13.68□□□□□ -0.22
PHF1-202ENST00000374516 APCSP02743 223 aa13.68□□□□□ -0.22
PHF1-202ENST00000374516 IBA57Q5T440 356 aaKnown RBP13.68□□□□□ -0.22
PHF1-202ENST00000374516 KLHDC1Q8N7A1 406 aa13.68□□□□□ -0.22
PHF1-202ENST00000374516 OR4S2Q8NH73 311 aa13.68□□□□□ -0.22
PHF1-202ENST00000374516 ZNF714Q96N38 554 aa13.68□□□□□ -0.22
PHF1-202ENST00000374516 FOXA2Q9Y261 457 aaPredicted RBP13.68□□□□□ -0.22
PHF1-202ENST00000374516 GGTLC3B5MD39 225 aa13.67□□□□□ -0.22
PHF1-202ENST00000374516 LRRC10Q5BKY1 277 aa13.67□□□□□ -0.22
PHF1-202ENST00000374516 OR4A47Q6IF82 309 aa13.67□□□□□ -0.22
PHF1-202ENST00000374516 BORCS7Q96B45 105 aa13.67□□□□□ -0.22
PHF1-202ENST00000374516 GAL3ST2Q9H3Q3 398 aa13.67□□□□□ -0.22
PHF1-202ENST00000374516 SERTAD4Q9NUC0 356 aa13.67□□□□□ -0.22
PHF1-202ENST00000374516 C20orf202A1L168 122 aa13.67□□□□□ -0.22
PHF1-202ENST00000374516 FNDC10F2Z333 226 aa13.67□□□□□ -0.22
PHF1-202ENST00000374516 PPOXP50336 477 aa13.67□□□□□ -0.22
PHF1-202ENST00000374516 MEF2CQ06413 473 aaPredicted RBP13.67□□□□□ -0.22
PHF1-202ENST00000374516 SLC25A48Q6ZT89 311 aaKnown RBP13.67□□□□□ -0.22
PHF1-202ENST00000374516 OR7C2O60412 319 aa13.66□□□□□ -0.22
PHF1-202ENST00000374516 MGST1P10620 155 aaKnown RBP13.66□□□□□ -0.22
PHF1-202ENST00000374516 MYOD1P15172 320 aa13.66□□□□□ -0.22
PHF1-202ENST00000374516 ORAOV1Q8WV07 137 aa13.66□□□□□ -0.22
PHF1-202ENST00000374516 FAM122AQ96E09 287 aa13.66□□□□□ -0.22
PHF1-202ENST00000374516 PRORYQ9H606 182 aa13.66□□□□□ -0.22
PHF1-202ENST00000374516 SLC35D1Q9NTN3 355 aa13.66□□□□□ -0.22
PHF1-202ENST00000374516 ASH1LQ9NR48 2969 aaKnown RBP13.66□□□□□ -0.22
PHF1-202ENST00000374516 IZUMO1RA6ND01 250 aa13.65□□□□□ -0.22
PHF1-202ENST00000374516 NTF3P20783 257 aa13.65□□□□□ -0.22
PHF1-202ENST00000374516 ZNF672Q499Z4 452 aaPredicted RBP13.65□□□□□ -0.22
PHF1-202ENST00000374516 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.65□□□□□ -0.22
PHF1-202ENST00000374516 HINT2Q9BX68 163 aa13.65□□□□□ -0.22
PHF1-202ENST00000374516 CLEC7AQ9BXN2 247 aa13.65□□□□□ -0.22
PHF1-202ENST00000374516 PLEKHA3Q9HB20 300 aa13.65□□□□□ -0.22
PHF1-202ENST00000374516 IGKV1OR2-108A0A075B7D4 117 aa13.65□□□□□ -0.22
PHF1-202ENST00000374516 LY6HO94772 140 aa13.65□□□□□ -0.22
PHF1-202ENST00000374516 IGKV1-16P04430 117 aa13.65□□□□□ -0.22
PHF1-202ENST00000374516 CT45A6P0DMU7 189 aa13.65□□□□□ -0.22
PHF1-202ENST00000374516 CT45A5P0DMU8 189 aa13.65□□□□□ -0.22
PHF1-202ENST00000374516 CT45A7P0DMV0 189 aa13.65□□□□□ -0.22
PHF1-202ENST00000374516 GATA2P23769 480 aaPredicted RBP13.65□□□□□ -0.22
PHF1-202ENST00000374516 MOB3BQ86TA1 216 aa13.65□□□□□ -0.22
PHF1-202ENST00000374516 ATOH7Q8N100 152 aa13.65□□□□□ -0.22
PHF1-202ENST00000374516 IGF2BP2-AS1Q96M15 143 aa13.65□□□□□ -0.22
PHF1-202ENST00000374516 ZNF331Q9NQX6 463 aaPredicted RBP13.65□□□□□ -0.22
PHF1-202ENST00000374516 COL12A1Q99715 3063 aa13.65□□□□□ -0.22
PHF1-202ENST00000374516 TRAV34A0A0B4J273 112 aa13.64□□□□□ -0.23
PHF1-202ENST00000374516 CCL25O15444 150 aa13.64□□□□□ -0.23
PHF1-202ENST00000374516 CA1P00915 261 aaPredicted RBP13.64□□□□□ -0.23
PHF1-202ENST00000374516 USF1P22415 310 aaPredicted RBP13.64□□□□□ -0.23
PHF1-202ENST00000374516 LOXP28300 417 aaPredicted RBP13.64□□□□□ -0.23
PHF1-202ENST00000374516 TSPOP30536 169 aa13.64□□□□□ -0.23
PHF1-202ENST00000374516 REG1BP48304 166 aa13.64□□□□□ -0.23
PHF1-202ENST00000374516 SLAQ13239 276 aa13.64□□□□□ -0.23
PHF1-202ENST00000374516 MAJINQ3KP22 176 aa13.64□□□□□ -0.23
PHF1-202ENST00000374516 C18orf32Q8TCD1 76 aa13.64□□□□□ -0.23
PHF1-202ENST00000374516 FAM168AQ92567 244 aa13.64□□□□□ -0.23
PHF1-202ENST00000374516 MRPL27Q9P0M9 148 aaKnown RBP13.64□□□□□ -0.23
PHF1-202ENST00000374516 A0A1W2PRE2 83 aa13.64□□□□□ -0.23
PHF1-202ENST00000374516 PTTG1IPP53801 180 aa13.64□□□□□ -0.23
PHF1-202ENST00000374516 LCN12Q6JVE5 192 aa13.64□□□□□ -0.23
PHF1-202ENST00000374516 MRPS16Q9Y3D3 137 aaKnown RBP13.64□□□□□ -0.23
PHF1-202ENST00000374516 OR51B2Q9Y5P1 312 aa13.64□□□□□ -0.23
PHF1-202ENST00000374516 TAS2R45P59539 299 aa13.63□□□□□ -0.23
PHF1-202ENST00000374516 PMCHL1Q16048 86 aa13.63□□□□□ -0.23
PHF1-202ENST00000374516 RALYQ9UKM9 306 aaKnown RBP13.63□□□□□ -0.23
PHF1-202ENST00000374516 MALRD1Q5VYJ5 2156 aa13.63□□□□□ -0.23
PHF1-202ENST00000374516 TNXAQ16473 311 aa13.63□□□□□ -0.23
PHF1-202ENST00000374516 C19orf24Q9BVV8 132 aa13.63□□□□□ -0.23
PHF1-202ENST00000374516 CFAP46Q8IYW2 2715 aa13.62□□□□□ -0.23
PHF1-202ENST00000374516 J3QR06 171 aa13.62□□□□□ -0.23
PHF1-202ENST00000374516 HINT1P49773 126 aaPredicted RBP13.62□□□□□ -0.23
PHF1-202ENST00000374516 DLX1P56177 255 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms