RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 IGKV1-27A0A075B6S5 117 aa8.51□□□□□ -1.05
CD28-202ENST00000374481 A0A1W2PRD5 423 aa8.51□□□□□ -1.05
CD28-202ENST00000374481 A0A1W2PRF3 423 aa8.51□□□□□ -1.05
CD28-202ENST00000374481 A0A1W2PRM7 423 aa8.51□□□□□ -1.05
CD28-202ENST00000374481 C12orf77C9JDV5 145 aa8.51□□□□□ -1.05
CD28-202ENST00000374481 IGKV3-11P04433 115 aa8.51□□□□□ -1.05
CD28-202ENST00000374481 MEIG1Q5JSS6 88 aa8.51□□□□□ -1.05
CD28-202ENST00000374481 LCNL1Q6ZST4 164 aa8.51□□□□□ -1.05
CD28-202ENST00000374481 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.51□□□□□ -1.05
CD28-202ENST00000374481 VKORC1Q9BQB6 163 aa8.51□□□□□ -1.05
CD28-202ENST00000374481 SCNM1Q9BWG6 230 aa8.51□□□□□ -1.05
CD28-202ENST00000374481 A0A1W2PQF6 199 aa8.51□□□□□ -1.05
CD28-202ENST00000374481 C9orf153Q5TBE3 101 aa8.51□□□□□ -1.05
CD28-202ENST00000374481 SHISA5Q8N114 240 aa8.51□□□□□ -1.05
CD28-202ENST00000374481 DUSP23Q9BVJ7 150 aa8.51□□□□□ -1.05
CD28-202ENST00000374481 PRDM14Q9GZV8 571 aa8.5□□□□□ -1.05
CD28-202ENST00000374481 PHF3Q92576 2039 aaKnown RBP8.5□□□□□ -1.05
CD28-202ENST00000374481 A0A1W2PQM1 296 aa8.5□□□□□ -1.05
CD28-202ENST00000374481 F5H697 171 aa8.5□□□□□ -1.05
CD28-202ENST00000374481 CELA3BP08861 270 aa8.5□□□□□ -1.05
CD28-202ENST00000374481 WNT2P09544 360 aa8.5□□□□□ -1.05
CD28-202ENST00000374481 LGALS3P17931 250 aaKnown RBP8.5□□□□□ -1.05
CD28-202ENST00000374481 EVI2AP22794 236 aa8.5□□□□□ -1.05
CD28-202ENST00000374481 NPPCP23582 126 aa8.5□□□□□ -1.05
CD28-202ENST00000374481 TMPRSS3P57727 454 aa8.5□□□□□ -1.05
CD28-202ENST00000374481 ASCL4Q6XD76 172 aa8.5□□□□□ -1.05
CD28-202ENST00000374481 REG1BP48304 166 aa8.5□□□□□ -1.05
CD28-202ENST00000374481 SRSF6Q13247 344 aaKnown RBP8.5□□□□□ -1.05
CD28-202ENST00000374481 ZNF562Q6V9R5 426 aa8.5□□□□□ -1.05
CD28-202ENST00000374481 RND1Q92730 232 aa8.5□□□□□ -1.05
CD28-202ENST00000374481 RNF183Q96D59 192 aa8.5□□□□□ -1.05
CD28-202ENST00000374481 TRPM7Q96QT4 1865 aa8.5□□□□□ -1.05
CD28-202ENST00000374481 PPP1R32Q7Z5V6 425 aa8.5□□□□□ -1.05
CD28-202ENST00000374481 CXXC4Q9H2H0 198 aa8.5□□□□□ -1.05
CD28-202ENST00000374481 IFI27L2Q9H2X8 130 aa8.5□□□□□ -1.05
CD28-202ENST00000374481 K7ESF4 209 aa8.49□□□□□ -1.05
CD28-202ENST00000374481 SYNGR3O43761 229 aa8.49□□□□□ -1.05
CD28-202ENST00000374481 LGALS7P47929 136 aa8.49□□□□□ -1.05
CD28-202ENST00000374481 ATP5IP56385 69 aaPredicted RBP8.49□□□□□ -1.05
CD28-202ENST00000374481 SLC25A48Q6ZT89 311 aaKnown RBP8.49□□□□□ -1.05
CD28-202ENST00000374481 UBALD2Q8IYN6 164 aa8.49□□□□□ -1.05
CD28-202ENST00000374481 LINC00479Q96M42 142 aa8.49□□□□□ -1.05
CD28-202ENST00000374481 SMPXQ9UHP9 88 aa8.49□□□□□ -1.05
CD28-202ENST00000374481 TMEM8BA6NDV4 472 aa8.49□□□□□ -1.05
CD28-202ENST00000374481 APELAP0DMC3 54 aa8.49□□□□□ -1.05
CD28-202ENST00000374481 NTF4P34130 210 aa8.49□□□□□ -1.05
CD28-202ENST00000374481 SCRT2Q9NQ03 307 aa8.49□□□□□ -1.05
CD28-202ENST00000374481 TNRC6AQ8NDV7 1962 aaKnown RBP8.49□□□□□ -1.05
CD28-202ENST00000374481 K7EN84 100 aa8.49□□□□□ -1.05
CD28-202ENST00000374481 SIVA1O15304 175 aa8.49□□□□□ -1.05
CD28-202ENST00000374481 CD24P25063 80 aa8.49□□□□□ -1.05
CD28-202ENST00000374481 MYO7BQ6PIF6 2116 aa8.49□□□□□ -1.05
CD28-202ENST00000374481 PPP1R27Q86WC6 154 aa8.49□□□□□ -1.05
CD28-202ENST00000374481 TEX45Q8NA69 505 aa8.49□□□□□ -1.05
CD28-202ENST00000374481 TRBV7-9A0A0J9YWB2 115 aa8.48□□□□□ -1.05
CD28-202ENST00000374481 SMIM27A0A1W2PRY6 76 aa8.48□□□□□ -1.05
CD28-202ENST00000374481 KLRC4-KLRK1H3BQV0 150 aa8.48□□□□□ -1.05
CD28-202ENST00000374481 ZNF714Q96N38 554 aa8.48□□□□□ -1.05
CD28-202ENST00000374481 ARHGAP21Q5T5U3 1957 aa8.48□□□□□ -1.05
CD28-202ENST00000374481 TRAV2A0A0B4J234 112 aa8.48□□□□□ -1.05
CD28-202ENST00000374481 C15orf62A8K5M9 175 aa8.48□□□□□ -1.05
CD28-202ENST00000374481 D6R8Y8 96 aa8.48□□□□□ -1.05
CD28-202ENST00000374481 IGHV4-39P01824 125 aa8.48□□□□□ -1.05
CD28-202ENST00000374481 ALKBH6Q3KRA9 238 aa8.48□□□□□ -1.05
CD28-202ENST00000374481 CENPVQ7Z7K6 275 aaPredicted RBP8.48□□□□□ -1.05
CD28-202ENST00000374481 IDI2-AS1Q9NZ38 188 aa8.48□□□□□ -1.05
CD28-202ENST00000374481 PRSS29PA6NIE9 313 aa8.48□□□□□ -1.05
CD28-202ENST00000374481 ZNF815PA8K554 130 aa8.48□□□□□ -1.05
CD28-202ENST00000374481 TMEM54Q969K7 222 aa8.48□□□□□ -1.05
CD28-202ENST00000374481 RALGAPA1Q6GYQ0 2036 aa8.48□□□□□ -1.05
CD28-202ENST00000374481 MTCL1Q9Y4B5 1905 aaKnown RBP8.48□□□□□ -1.05
CD28-202ENST00000374481 FCN3O75636 299 aa8.48□□□□□ -1.05
CD28-202ENST00000374481 MGPP08493 103 aa8.48□□□□□ -1.05
CD28-202ENST00000374481 LINC00271P0C7V0 271 aa8.47□□□□□ -1.05
CD28-202ENST00000374481 IFI27P40305 119 aaPredicted RBP8.47□□□□□ -1.05
CD28-202ENST00000374481 RPL39P5Q59GN2 51 aa8.47□□□□□ -1.05
CD28-202ENST00000374481 PATJQ8NI35 1801 aa8.47□□□□□ -1.05
CD28-202ENST00000374481 ABCA1O95477 2261 aa8.47□□□□□ -1.05
CD28-202ENST00000374481 TRAV24A0A0B4J272 114 aa8.47□□□□□ -1.05
CD28-202ENST00000374481 VDAC2P45880 294 aaPredicted RBP8.47□□□□□ -1.05
CD28-202ENST00000374481 LOXL3P58215 753 aa8.47□□□□□ -1.05
CD28-202ENST00000374481 HCP5Q6MZN7 132 aa8.47□□□□□ -1.05
CD28-202ENST00000374481 ZNF826PQ6ZT77 177 aa8.47□□□□□ -1.05
CD28-202ENST00000374481 ZNF837Q96EG3 531 aaPredicted RBP8.47□□□□□ -1.05
CD28-202ENST00000374481 ICE1Q9Y2F5 2266 aa8.47□□□□□ -1.05
CD28-202ENST00000374481 FRMD6-AS1P0C7T7 363 aa8.47□□□□□ -1.05
CD28-202ENST00000374481 ZNF688P0C7X2 276 aa8.47□□□□□ -1.05
CD28-202ENST00000374481 CCL3P10147 92 aa8.47□□□□□ -1.05
CD28-202ENST00000374481 ADIPOQQ15848 244 aa8.47□□□□□ -1.05
CD28-202ENST00000374481 LINC00173Q6ZV60 143 aa8.47□□□□□ -1.05
CD28-202ENST00000374481 SSC4DQ8WTU2 575 aa8.47□□□□□ -1.05
CD28-202ENST00000374481 C11orf52Q96A22 123 aa8.47□□□□□ -1.05
CD28-202ENST00000374481 SCGB3A1Q96QR1 104 aa8.47□□□□□ -1.05
CD28-202ENST00000374481 Q9H3A6 140 aa8.47□□□□□ -1.05
CD28-202ENST00000374481 NXT2Q9NPJ8 142 aaKnown RBP8.47□□□□□ -1.05
CD28-202ENST00000374481 PRR33A8MZF0 331 aa8.46□□□□□ -1.05
CD28-202ENST00000374481 RPL11P62913 178 aaKnown RBP8.46□□□□□ -1.05
CD28-202ENST00000374481 TMEM170BQ5T4T1 132 aa8.46□□□□□ -1.05
CD28-202ENST00000374481 SPATA12Q7Z6I5 190 aa8.46□□□□□ -1.05
CD28-202ENST00000374481 TUSC5Q8IXB3 177 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms