RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 C10orf113Q5VZT2 155 aa13.34□□□□□ -0.27
PTPN20-203ENST00000374342 TMEM219Q86XT9 240 aa13.34□□□□□ -0.27
PTPN20-203ENST00000374342 RNF2Q99496 336 aa13.34□□□□□ -0.27
PTPN20-203ENST00000374342 DNAJC4Q9NNZ3 241 aa13.34□□□□□ -0.27
PTPN20-203ENST00000374342 USP9YO00507 2555 aaPredicted RBP13.34□□□□□ -0.27
PTPN20-203ENST00000374342 MORN5Q5VZ52 161 aa13.33□□□□□ -0.28
PTPN20-203ENST00000374342 LINC01356Q8N9X3 169 aa13.33□□□□□ -0.28
PTPN20-203ENST00000374342 MAPK1IP1LQ8NDC0 245 aa13.33□□□□□ -0.28
PTPN20-203ENST00000374342 UHRF2Q96PU4 802 aa13.33□□□□□ -0.28
PTPN20-203ENST00000374342 SMCO4Q9NRQ5 59 aa13.33□□□□□ -0.28
PTPN20-203ENST00000374342 BEX4Q9NWD9 120 aaPredicted RBP13.33□□□□□ -0.28
PTPN20-203ENST00000374342 YTHDF2Q9Y5A9 579 aaKnown RBP13.33□□□□□ -0.28
PTPN20-203ENST00000374342 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.33□□□□□ -0.28
PTPN20-203ENST00000374342 DEFB113Q30KQ7 82 aa13.33□□□□□ -0.28
PTPN20-203ENST00000374342 PATE2Q6UY27 113 aa13.33□□□□□ -0.28
PTPN20-203ENST00000374342 PARLQ9H300 379 aa13.33□□□□□ -0.28
PTPN20-203ENST00000374342 SOX21Q9Y651 276 aaPredicted RBP13.33□□□□□ -0.28
PTPN20-203ENST00000374342 TENM4Q6N022 2769 aa13.33□□□□□ -0.28
PTPN20-203ENST00000374342 POLQO75417 2590 aa13.32□□□□□ -0.28
PTPN20-203ENST00000374342 CR1P17927 2039 aa13.32□□□□□ -0.28
PTPN20-203ENST00000374342 IGLV11-55A0A075B6I3 123 aa13.32□□□□□ -0.28
PTPN20-203ENST00000374342 TRAV5A0A0B4J249 113 aa13.32□□□□□ -0.28
PTPN20-203ENST00000374342 SH2D7A6NKC9 451 aaPredicted RBP13.32□□□□□ -0.28
PTPN20-203ENST00000374342 J3QKU1 62 aa13.32□□□□□ -0.28
PTPN20-203ENST00000374342 PDE6DO43924 150 aa13.32□□□□□ -0.28
PTPN20-203ENST00000374342 IGLC1P0CG04 106 aa13.32□□□□□ -0.28
PTPN20-203ENST00000374342 C8orf88P0DMB2 117 aa13.32□□□□□ -0.28
PTPN20-203ENST00000374342 EGR2P11161 476 aaPredicted RBP13.32□□□□□ -0.28
PTPN20-203ENST00000374342 ECSCRQ19T08 205 aa13.32□□□□□ -0.28
PTPN20-203ENST00000374342 Q5PR19 223 aa13.32□□□□□ -0.28
PTPN20-203ENST00000374342 PQLC2Q6ZP29 291 aa13.32□□□□□ -0.28
PTPN20-203ENST00000374342 TTC9CQ8N5M4 171 aa13.32□□□□□ -0.28
PTPN20-203ENST00000374342 OR5T1Q8NG75 326 aa13.32□□□□□ -0.28
PTPN20-203ENST00000374342 OR1B1Q8NGR6 318 aa13.32□□□□□ -0.28
PTPN20-203ENST00000374342 ZNF503Q96F45 646 aa13.32□□□□□ -0.28
PTPN20-203ENST00000374342 SLC25A2Q9BXI2 301 aa13.32□□□□□ -0.28
PTPN20-203ENST00000374342 ZNF355PQ9NSJ1 428 aa13.32□□□□□ -0.28
PTPN20-203ENST00000374342 S4R3C0 116 aa13.32□□□□□ -0.28
PTPN20-203ENST00000374342 CENPEQ02224 2701 aa13.32□□□□□ -0.28
PTPN20-203ENST00000374342 RNF223E7ERA6 249 aa13.31□□□□□ -0.28
PTPN20-203ENST00000374342 NDUFS6O75380 124 aaKnown RBP13.31□□□□□ -0.28
PTPN20-203ENST00000374342 CLN5O75503 358 aa13.31□□□□□ -0.28
PTPN20-203ENST00000374342 OR10J4P0C629 311 aa13.31□□□□□ -0.28
PTPN20-203ENST00000374342 ORM2P19652 201 aa13.31□□□□□ -0.28
PTPN20-203ENST00000374342 GATA3P23771 443 aa13.31□□□□□ -0.28
PTPN20-203ENST00000374342 TIGITQ495A1 244 aa13.31□□□□□ -0.28
PTPN20-203ENST00000374342 OR5AU1Q8NGC0 362 aa13.31□□□□□ -0.28
PTPN20-203ENST00000374342 OR51G1Q8NGK1 321 aa13.31□□□□□ -0.28
PTPN20-203ENST00000374342 FANCD2OSQ96PS1 177 aa13.31□□□□□ -0.28
PTPN20-203ENST00000374342 TMEM167BQ9NRX6 74 aa13.31□□□□□ -0.28
PTPN20-203ENST00000374342 MOB4Q9Y3A3 225 aa13.31□□□□□ -0.28
PTPN20-203ENST00000374342 ABCA1O95477 2261 aa13.31□□□□□ -0.28
PTPN20-203ENST00000374342 F6UZH7 168 aa13.31□□□□□ -0.28
PTPN20-203ENST00000374342 ATP6V0E1O15342 81 aa13.31□□□□□ -0.28
PTPN20-203ENST00000374342 AVPP01185 164 aa13.31□□□□□ -0.28
PTPN20-203ENST00000374342 C5orf56Q8N8D9 126 aa13.31□□□□□ -0.28
PTPN20-203ENST00000374342 NAT8Q9UHE5 227 aa13.31□□□□□ -0.28
PTPN20-203ENST00000374342 CSMD2Q7Z408 3487 aa13.3□□□□□ -0.28
PTPN20-203ENST00000374342 UBE2L3P68036 154 aaKnown RBP13.3□□□□□ -0.28
PTPN20-203ENST00000374342 PNRC1Q12796 327 aaPredicted RBP13.3□□□□□ -0.28
PTPN20-203ENST00000374342 LINC00305Q7Z4B0 112 aa13.3□□□□□ -0.28
PTPN20-203ENST00000374342 ISOC2Q96AB3 205 aa13.3□□□□□ -0.28
PTPN20-203ENST00000374342 FAM167A-AS1Q96KT0 104 aa13.3□□□□□ -0.28
PTPN20-203ENST00000374342 SSX3Q99909 188 aa13.3□□□□□ -0.28
PTPN20-203ENST00000374342 TXNDC17Q9BRA2 123 aa13.3□□□□□ -0.28
PTPN20-203ENST00000374342 MEGF9Q9H1U4 602 aa13.3□□□□□ -0.28
PTPN20-203ENST00000374342 SDF2L1Q9HCN8 221 aa13.3□□□□□ -0.28
PTPN20-203ENST00000374342 MAP1AP78559 2803 aaPredicted RBP13.29□□□□□ -0.28
PTPN20-203ENST00000374342 NPPCP23582 126 aa13.29□□□□□ -0.28
PTPN20-203ENST00000374342 LYZP61626 148 aa13.29□□□□□ -0.28
PTPN20-203ENST00000374342 UNQ5815/PRO19632Q6UWF5 114 aa13.29□□□□□ -0.28
PTPN20-203ENST00000374342 SGMS2Q8NHU3 365 aa13.29□□□□□ -0.28
PTPN20-203ENST00000374342 PIFOQ8TCI5 191 aa13.29□□□□□ -0.28
PTPN20-203ENST00000374342 TMUB1Q9BVT8 246 aa13.29□□□□□ -0.28
PTPN20-203ENST00000374342 ELOA3CA0A087WX78 387 aaPredicted RBP13.29□□□□□ -0.28
PTPN20-203ENST00000374342 SCO2A0A1W2PP80 73 aa13.29□□□□□ -0.28
PTPN20-203ENST00000374342 ATF4P18848 351 aaPredicted RBP13.29□□□□□ -0.28
PTPN20-203ENST00000374342 LOXL1Q08397 574 aaPredicted RBP13.29□□□□□ -0.28
PTPN20-203ENST00000374342 PTPN13Q12923 2485 aa13.29□□□□□ -0.28
PTPN20-203ENST00000374342 ADIRFQ15847 76 aa13.29□□□□□ -0.28
PTPN20-203ENST00000374342 LRRC75A-AS1Q8N1F1 130 aa13.29□□□□□ -0.28
PTPN20-203ENST00000374342 DOPEY2Q9Y3R5 2298 aa13.28□□□□□ -0.28
PTPN20-203ENST00000374342 HYPMO75409 117 aa13.28□□□□□ -0.28
PTPN20-203ENST00000374342 OR2J3O76001 311 aa13.28□□□□□ -0.28
PTPN20-203ENST00000374342 IGKV1-17P01599 117 aa13.28□□□□□ -0.28
PTPN20-203ENST00000374342 PSG1P11464 419 aa13.28□□□□□ -0.28
PTPN20-203ENST00000374342 LY6EQ16553 131 aa13.28□□□□□ -0.28
PTPN20-203ENST00000374342 TMEM241Q24JQ0 296 aa13.28□□□□□ -0.28
PTPN20-203ENST00000374342 HIST2H2BCQ6DN03 193 aa13.28□□□□□ -0.28
PTPN20-203ENST00000374342 FAM110DQ8TAY7 271 aaPredicted RBP13.28□□□□□ -0.28
PTPN20-203ENST00000374342 DERL1Q9BUN8 251 aa13.28□□□□□ -0.28
PTPN20-203ENST00000374342 CELSR1Q9NYQ6 3014 aa13.27□□□□□ -0.28
PTPN20-203ENST00000374342 H3BUX3 64 aa13.27□□□□□ -0.28
PTPN20-203ENST00000374342 NDUFB4O95168 129 aa13.27□□□□□ -0.28
PTPN20-203ENST00000374342 TGFAP01135 160 aa13.27□□□□□ -0.28
PTPN20-203ENST00000374342 PYYP10082 97 aa13.27□□□□□ -0.28
PTPN20-203ENST00000374342 C15orf54Q8N8G6 183 aa13.27□□□□□ -0.28
PTPN20-203ENST00000374342 PAXXQ9BUH6 204 aa13.27□□□□□ -0.28
PTPN20-203ENST00000374342 ARL2-SNX15V9GYD0 113 aa13.27□□□□□ -0.28
PTPN20-203ENST00000374342 ABCA12Q86UK0 2595 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms