RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 LRTM2Q8N967 370 aa14.24□□□□□ -0.13
TRAPPC3-204ENST00000373166 TMEM116Q8NCL8 245 aa14.24□□□□□ -0.13
TRAPPC3-204ENST00000373166 OR4X1Q8NH49 305 aa14.24□□□□□ -0.13
TRAPPC3-204ENST00000373166 RNASEH2CQ8TDP1 164 aaKnown RBP14.24□□□□□ -0.13
TRAPPC3-204ENST00000373166 DTD1Q8TEA8 209 aa14.24□□□□□ -0.13
TRAPPC3-204ENST00000373166 ZNF414Q96IQ9 312 aa14.24□□□□□ -0.13
TRAPPC3-204ENST00000373166 SDHCQ99643 169 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC3-204ENST00000373166 C7orf50Q9BRJ6 194 aaKnown RBP14.24□□□□□ -0.13
TRAPPC3-204ENST00000373166 SMPXQ9UHP9 88 aa14.24□□□□□ -0.13
TRAPPC3-204ENST00000373166 TRAV14DV4A0A0A6YYC5 116 aa14.23□□□□□ -0.13
TRAPPC3-204ENST00000373166 TSPAN4O14817 238 aa14.23□□□□□ -0.13
TRAPPC3-204ENST00000373166 SPRY2O43597 315 aa14.23□□□□□ -0.13
TRAPPC3-204ENST00000373166 TMEM50AO95807 157 aa14.23□□□□□ -0.13
TRAPPC3-204ENST00000373166 IFNA10P01566 189 aa14.23□□□□□ -0.13
TRAPPC3-204ENST00000373166 IL7P13232 177 aa14.23□□□□□ -0.13
TRAPPC3-204ENST00000373166 ATF4P18848 351 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC3-204ENST00000373166 APOC4P55056 127 aa14.23□□□□□ -0.13
TRAPPC3-204ENST00000373166 RBKSQ9H477 322 aa14.23□□□□□ -0.13
TRAPPC3-204ENST00000373166 PUS1Q9Y606 427 aaKnown RBP eCLIP14.23□□□□□ -0.13
TRAPPC3-204ENST00000373166 SLC25A4P12235 298 aa14.22□□□□□ -0.13
TRAPPC3-204ENST00000373166 ETFRF1Q6IPR1 90 aa14.22□□□□□ -0.13
TRAPPC3-204ENST00000373166 TOMM20LQ6UXN7 152 aa14.22□□□□□ -0.13
TRAPPC3-204ENST00000373166 RHPN1-AS1Q9BWJ2 59 aa14.22□□□□□ -0.13
TRAPPC3-204ENST00000373166 MRPL36Q9P0J6 103 aaKnown RBP14.22□□□□□ -0.13
TRAPPC3-204ENST00000373166 TMED3Q9Y3Q3 217 aa14.22□□□□□ -0.13
TRAPPC3-204ENST00000373166 HECTD4Q9Y4D8 3996 aa14.22□□□□□ -0.13
TRAPPC3-204ENST00000373166 TRAV30A0A087WSZ9 112 aa14.21□□□□□ -0.13
TRAPPC3-204ENST00000373166 IGHV3-49A0A0A0MS15 119 aa14.21□□□□□ -0.13
TRAPPC3-204ENST00000373166 OR4C46A6NHA9 309 aa14.21□□□□□ -0.13
TRAPPC3-204ENST00000373166 CHEK1O14757 476 aa14.21□□□□□ -0.13
TRAPPC3-204ENST00000373166 DEDDO75618 318 aa14.21□□□□□ -0.13
TRAPPC3-204ENST00000373166 SLC25A6P12236 298 aa14.21□□□□□ -0.13
TRAPPC3-204ENST00000373166 MLANAQ16655 118 aa14.21□□□□□ -0.13
TRAPPC3-204ENST00000373166 LGALS9CQ6DKI2 356 aa14.21□□□□□ -0.13
TRAPPC3-204ENST00000373166 TMEM217Q8N7C4 229 aa14.21□□□□□ -0.13
TRAPPC3-204ENST00000373166 ZFAND3Q9H8U3 227 aa14.21□□□□□ -0.13
TRAPPC3-204ENST00000373166 U3KQ87 197 aa14.21□□□□□ -0.13
TRAPPC3-204ENST00000373166 UBE2CO00762 179 aa14.2□□□□□ -0.14
TRAPPC3-204ENST00000373166 RND2P52198 227 aa14.2□□□□□ -0.14
TRAPPC3-204ENST00000373166 TMEM170AQ8WVE7 144 aa14.2□□□□□ -0.14
TRAPPC3-204ENST00000373166 RNF2Q99496 336 aa14.2□□□□□ -0.14
TRAPPC3-204ENST00000373166 FAM90A26D6RGX4 464 aa14.19□□□□□ -0.14
TRAPPC3-204ENST00000373166 PITX3O75364 302 aa14.19□□□□□ -0.14
TRAPPC3-204ENST00000373166 DEFB135Q30KP9 77 aa14.19□□□□□ -0.14
TRAPPC3-204ENST00000373166 PRSS54Q6PEW0 395 aa14.19□□□□□ -0.14
TRAPPC3-204ENST00000373166 OR1S2Q8NGQ3 325 aa14.19□□□□□ -0.14
TRAPPC3-204ENST00000373166 IGHV3OR16-13A0A075B7E8 117 aa14.18□□□□□ -0.14
TRAPPC3-204ENST00000373166 IGHV3-74A0A0B4J1X5 117 aa14.18□□□□□ -0.14
TRAPPC3-204ENST00000373166 C9orf170A2RU37 121 aa14.18□□□□□ -0.14
TRAPPC3-204ENST00000373166 MED6O75586 246 aa14.18□□□□□ -0.14
TRAPPC3-204ENST00000373166 CD5P06127 495 aa14.18□□□□□ -0.14
TRAPPC3-204ENST00000373166 HOXB5P09067 269 aa14.18□□□□□ -0.14
TRAPPC3-204ENST00000373166 OR10J1P30954 320 aa14.18□□□□□ -0.14
TRAPPC3-204ENST00000373166 BTCP35070 178 aa14.18□□□□□ -0.14
TRAPPC3-204ENST00000373166 ATP5IP56385 69 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC3-204ENST00000373166 TIGITQ495A1 244 aa14.18□□□□□ -0.14
TRAPPC3-204ENST00000373166 COQ8AQ8NI60 647 aa14.18□□□□□ -0.14
TRAPPC3-204ENST00000373166 PHLDA1Q8WV24 401 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC3-204ENST00000373166 METTL26Q96S19 204 aa14.18□□□□□ -0.14
TRAPPC3-204ENST00000373166 TMEM231Q9H6L2 316 aa14.18□□□□□ -0.14
TRAPPC3-204ENST00000373166 FLVCR2Q9UPI3 526 aa14.18□□□□□ -0.14
TRAPPC3-204ENST00000373166 IGKV1-17P01599 117 aa14.17□□□□□ -0.14
TRAPPC3-204ENST00000373166 IFNA4P05014 189 aa14.17□□□□□ -0.14
TRAPPC3-204ENST00000373166 OR4E1P0C645 316 aa14.17□□□□□ -0.14
TRAPPC3-204ENST00000373166 IGLC1P0CG04 106 aa14.17□□□□□ -0.14
TRAPPC3-204ENST00000373166 DHRS2Q13268 280 aa14.17□□□□□ -0.14
TRAPPC3-204ENST00000373166 CNPY1Q3B7I2 92 aa14.17□□□□□ -0.14
TRAPPC3-204ENST00000373166 C4orf46Q504U0 113 aa14.17□□□□□ -0.14
TRAPPC3-204ENST00000373166 GGNBP1Q5YKI7 109 aa14.17□□□□□ -0.14
TRAPPC3-204ENST00000373166 STPG3Q8N7X2 389 aa14.17□□□□□ -0.14
TRAPPC3-204ENST00000373166 ST8SIA2Q92186 375 aa14.17□□□□□ -0.14
TRAPPC3-204ENST00000373166 RNF183Q96D59 192 aa14.17□□□□□ -0.14
TRAPPC3-204ENST00000373166 ACY3Q96HD9 319 aa14.17□□□□□ -0.14
TRAPPC3-204ENST00000373166 NARS2Q96I59 477 aaKnown RBP14.17□□□□□ -0.14
TRAPPC3-204ENST00000373166 UBQLN2Q9UHD9 624 aa14.17□□□□□ -0.14
TRAPPC3-204ENST00000373166 KIR2DL5BA0A0G2JN68 375 aa14.16□□□□□ -0.14
TRAPPC3-204ENST00000373166 KIR2DL5BA0A0G2JPC4 375 aa14.16□□□□□ -0.14
TRAPPC3-204ENST00000373166 LYRM1O43325 122 aa14.16□□□□□ -0.14
TRAPPC3-204ENST00000373166 IAPPP10997 89 aa14.16□□□□□ -0.14
TRAPPC3-204ENST00000373166 NPPCP23582 126 aa14.16□□□□□ -0.14
TRAPPC3-204ENST00000373166 LINC00299Q6ZSB3 139 aa14.16□□□□□ -0.14
TRAPPC3-204ENST00000373166 TCF24Q7RTU0 167 aa14.16□□□□□ -0.14
TRAPPC3-204ENST00000373166 KIR2DL5AQ8N109 375 aa14.16□□□□□ -0.14
TRAPPC3-204ENST00000373166 KIR2DL5BQ8NHK3 375 aa14.16□□□□□ -0.14
TRAPPC3-204ENST00000373166 CIB3Q96Q77 187 aaPredicted RBP14.16□□□□□ -0.14
TRAPPC3-204ENST00000373166 CCDC32Q9BV29 185 aa14.16□□□□□ -0.14
TRAPPC3-204ENST00000373166 VSIRQ9H7M9 311 aa14.16□□□□□ -0.14
TRAPPC3-204ENST00000373166 IGKV3-7A0A075B6H7 116 aa14.15□□□□□ -0.14
TRAPPC3-204ENST00000373166 A0A1W2PS18 150 aa14.15□□□□□ -0.14
TRAPPC3-204ENST00000373166 IFNA21P01568 189 aa14.15□□□□□ -0.14
TRAPPC3-204ENST00000373166 ANXA7P20073 488 aaKnown RBP14.15□□□□□ -0.14
TRAPPC3-204ENST00000373166 TFPI2P48307 235 aa14.15□□□□□ -0.14
TRAPPC3-204ENST00000373166 YPEL3P61236 119 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC3-204ENST00000373166 RAB11AP62491 216 aa14.15□□□□□ -0.14
TRAPPC3-204ENST00000373166 PAFAH1B2P68402 229 aa14.15□□□□□ -0.14
TRAPPC3-204ENST00000373166 ODF3L2Q3SX64 289 aa14.15□□□□□ -0.14
TRAPPC3-204ENST00000373166 Q8WTZ3 238 aa14.15□□□□□ -0.14
TRAPPC3-204ENST00000373166 NPIPB3Q92617 1050 aa14.15□□□□□ -0.14
TRAPPC3-204ENST00000373166 VPS13DQ5THJ4 4388 aa14.14□□□□□ -0.15
TRAPPC3-204ENST00000373166 IGHV3-66A0A0C4DH42 116 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms