RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 SRRM4A7MD48 611 aaKnown RBP4.41□□□□□ -1.7
ATG4A-204ENST00000372246 H0YJW9 148 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 REG1BP48304 166 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 DLX1P56177 255 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 RHOBP62745 196 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 ZNF146Q15072 292 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 ZNF766Q5HY98 468 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 BVES-AS1Q5T3Y7 98 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 WFDC3Q8IUB2 231 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 SAP25Q8TEE9 199 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 MBD6Q96DN6 1003 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 PGLYRP4Q96LB8 373 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 NPVFQ9HCQ7 196 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 ZNF331Q9NQX6 463 aaPredicted RBP4.41□□□□□ -1.7
ATG4A-204ENST00000372246 MRPL36Q9P0J6 103 aaKnown RBP4.41□□□□□ -1.7
ATG4A-204ENST00000372246 MPC1Q9Y5U8 109 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 TRIOBPQ9H2D6 2365 aa4.41□□□□□ -1.7
ATG4A-204ENST00000372246 TNRC6AQ8NDV7 1962 aaKnown RBP4.41□□□□□ -1.7
ATG4A-204ENST00000372246 IGHV1-24A0A0C4DH33 117 aa4.4□□□□□ -1.7
ATG4A-204ENST00000372246 IGHV1-69-2A0A0G2JMI3 117 aa4.4□□□□□ -1.7
ATG4A-204ENST00000372246 SMIM27A0A1W2PRY6 76 aa4.4□□□□□ -1.7
ATG4A-204ENST00000372246 PLGLB1Q02325 96 aa4.4□□□□□ -1.7
ATG4A-204ENST00000372246 MSMPQ1L6U9 139 aa4.4□□□□□ -1.7
ATG4A-204ENST00000372246 OR10J3Q5JRS4 329 aa4.4□□□□□ -1.7
ATG4A-204ENST00000372246 SLC35E4Q6ICL7 350 aa4.4□□□□□ -1.7
ATG4A-204ENST00000372246 TMEM251Q8N6I4 163 aa4.4□□□□□ -1.7
ATG4A-204ENST00000372246 STXBP6Q8NFX7 210 aa4.4□□□□□ -1.7
ATG4A-204ENST00000372246 OR5B3Q8NH48 314 aa4.4□□□□□ -1.7
ATG4A-204ENST00000372246 MAFAQ8NHW3 353 aaPredicted RBP4.4□□□□□ -1.7
ATG4A-204ENST00000372246 KLF14Q8TD94 323 aaPredicted RBP4.4□□□□□ -1.7
ATG4A-204ENST00000372246 FAM222BQ8WU58 562 aa4.4□□□□□ -1.7
ATG4A-204ENST00000372246 RAB1CQ92928 201 aa4.4□□□□□ -1.7
ATG4A-204ENST00000372246 IGF2BP2-AS1Q96M15 143 aa4.4□□□□□ -1.7
ATG4A-204ENST00000372246 TTTY12Q9BZ98 90 aa4.4□□□□□ -1.7
ATG4A-204ENST00000372246 C7orf69Q9H7B7 122 aa4.4□□□□□ -1.7
ATG4A-204ENST00000372246 PEF1Q9UBV8 284 aaKnown RBP4.4□□□□□ -1.7
ATG4A-204ENST00000372246 TPRP12270 2363 aaKnown RBP4.4□□□□□ -1.7
ATG4A-204ENST00000372246 PTPRBP23467 1997 aa4.4□□□□□ -1.7
ATG4A-204ENST00000372246 CELSR1Q9NYQ6 3014 aa4.4□□□□□ -1.71
ATG4A-204ENST00000372246 COL12A1Q99715 3063 aa4.4□□□□□ -1.71
ATG4A-204ENST00000372246 GAGE12BA1L429 117 aa4.4□□□□□ -1.71
ATG4A-204ENST00000372246 OOEPA6NGQ2 149 aa4.4□□□□□ -1.71
ATG4A-204ENST00000372246 FBLL1A6NHQ2 334 aaKnown RBP4.4□□□□□ -1.71
ATG4A-204ENST00000372246 C15orf65H3BRN8 121 aa4.4□□□□□ -1.71
ATG4A-204ENST00000372246 UBE2L3P68036 154 aaKnown RBP4.4□□□□□ -1.71
ATG4A-204ENST00000372246 RPL19P84098 196 aaKnown RBP4.4□□□□□ -1.71
ATG4A-204ENST00000372246 MORN2Q502X0 79 aa4.4□□□□□ -1.71
ATG4A-204ENST00000372246 WDR82Q6UXN9 313 aa4.4□□□□□ -1.71
ATG4A-204ENST00000372246 ACP7Q6ZNF0 438 aa4.4□□□□□ -1.71
ATG4A-204ENST00000372246 ITLN1Q8WWA0 313 aa4.4□□□□□ -1.71
ATG4A-204ENST00000372246 IGFBPL1Q8WX77 278 aa4.4□□□□□ -1.71
ATG4A-204ENST00000372246 JMJD8Q96S16 334 aa4.4□□□□□ -1.71
ATG4A-204ENST00000372246 TTTY13Q9BZ97 58 aa4.4□□□□□ -1.71
ATG4A-204ENST00000372246 PKIBQ9C010 78 aa4.4□□□□□ -1.71
ATG4A-204ENST00000372246 IFI27L2Q9H2X8 130 aa4.4□□□□□ -1.71
ATG4A-204ENST00000372246 MRPS16Q9Y3D3 137 aaKnown RBP4.4□□□□□ -1.71
ATG4A-204ENST00000372246 CEP192Q8TEP8 1941 aa4.4□□□□□ -1.71
ATG4A-204ENST00000372246 PKDREJQ9NTG1 2253 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 IGKV1D-17A0A075B6S4 117 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 SAA2-SAA4A0A096LPE2 208 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 IZUMO1RA6ND01 250 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 C9JCJ5 164 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 IGLV1-40P01703 118 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 SAA2P0DJI9 122 aaPredicted RBP4.39□□□□□ -1.71
ATG4A-204ENST00000372246 AREGP15514 252 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 LOXL1Q08397 574 aaPredicted RBP4.39□□□□□ -1.71
ATG4A-204ENST00000372246 DIAPH2-AS1Q14236 149 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 TBR1Q16650 682 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 MOB1BQ7L9L4 216 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 KLHDC1Q8N7A1 406 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 LRRC29Q8WV35 223 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 GTSF1Q8WW33 167 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 C11orf52Q96A22 123 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 S1PR3Q99500 378 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 SLC25A2Q9BXI2 301 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 GVINP1Q7Z2Y8 2422 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 FAM231BA6NCW3 169 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 C21orf140B9A014 251 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 M0R296 226 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 SPINT2O43291 252 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 MOSP00540 346 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 HLA-DQA1P01909 254 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 SRFP11831 508 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 IGHV1-2P23083 117 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 CT45A1Q5HYN5 189 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 LINC00596Q86U02 117 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 MTURNQ8N3F0 131 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 CNEP1R1Q8N9A8 125 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 OR2Z1Q8NG97 314 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 CT45A3Q8NHU0 189 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 TMEM70Q9BUB7 260 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 TPPP3Q9BW30 176 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 ZNF835Q9Y2P0 537 aa4.39□□□□□ -1.71
ATG4A-204ENST00000372246 IGKV3D-15A0A087WSY6 115 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 TRAV30A0A087WSZ9 112 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 A0A1B0GV72 72 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 A0A1W2PRE2 83 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 SYS1-DBNDD2H3BUS1 97 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 TIMM8AO60220 97 aaPredicted RBP4.38□□□□□ -1.71
ATG4A-204ENST00000372246 BRI3O95415 125 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms