RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 MT-ND6P03923 174 aa8.11□□□□□ -1.11
COL4A6-202ENST00000372216 NBEAP1P0C6P0 100 aa8.11□□□□□ -1.11
COL4A6-202ENST00000372216 FOLR2P14207 255 aa8.11□□□□□ -1.11
COL4A6-202ENST00000372216 ZNF474Q6S9Z5 364 aaPredicted RBP8.11□□□□□ -1.11
COL4A6-202ENST00000372216 Q6ZS92 163 aa8.11□□□□□ -1.11
COL4A6-202ENST00000372216 PRADC1Q9BSG0 188 aa8.11□□□□□ -1.11
COL4A6-202ENST00000372216 COL25A1Q9BXS0 654 aaPredicted RBP8.11□□□□□ -1.11
COL4A6-202ENST00000372216 ST20Q9HBF5 79 aa8.11□□□□□ -1.11
COL4A6-202ENST00000372216 ZNF625Q96I27 306 aaPredicted RBP8.11□□□□□ -1.11
COL4A6-202ENST00000372216 A0A096LPF7 62 aa8.11□□□□□ -1.11
COL4A6-202ENST00000372216 MLNRO43193 412 aa8.11□□□□□ -1.11
COL4A6-202ENST00000372216 HOXA3O43365 443 aaPredicted RBP8.11□□□□□ -1.11
COL4A6-202ENST00000372216 RAMP3O60896 148 aa8.11□□□□□ -1.11
COL4A6-202ENST00000372216 ZP1P60852 638 aa8.11□□□□□ -1.11
COL4A6-202ENST00000372216 FER1L6-AS1Q8NA97 138 aa8.11□□□□□ -1.11
COL4A6-202ENST00000372216 PSMG3Q9BT73 122 aaPredicted RBP8.11□□□□□ -1.11
COL4A6-202ENST00000372216 IGHV2-26A0A0B4J1V2 119 aa8.11□□□□□ -1.11
COL4A6-202ENST00000372216 IGKV1D-13A0A0B4J2D9 117 aa8.11□□□□□ -1.11
COL4A6-202ENST00000372216 TMEM178BH3BS89 294 aa8.11□□□□□ -1.11
COL4A6-202ENST00000372216 C1QTNF9P0C862 333 aa8.11□□□□□ -1.11
COL4A6-202ENST00000372216 IGKV1-13P0DP09 117 aa8.11□□□□□ -1.11
COL4A6-202ENST00000372216 MYOD1P15172 320 aa8.11□□□□□ -1.11
COL4A6-202ENST00000372216 TMEM200BQ69YZ2 307 aa8.11□□□□□ -1.11
COL4A6-202ENST00000372216 OR52E5Q8NH55 327 aa8.11□□□□□ -1.11
COL4A6-202ENST00000372216 MBD3L4A6NDZ8 208 aaPredicted RBP8.11□□□□□ -1.11
COL4A6-202ENST00000372216 MBD3L3A6NE82 208 aaPredicted RBP8.11□□□□□ -1.11
COL4A6-202ENST00000372216 MBD3L5A6NJ08 208 aaPredicted RBP8.11□□□□□ -1.11
COL4A6-202ENST00000372216 SAMD13Q5VXD3 122 aa8.11□□□□□ -1.11
COL4A6-202ENST00000372216 SIGLEC15Q6ZMC9 328 aa8.11□□□□□ -1.11
COL4A6-202ENST00000372216 MBD3L2Q8NHZ7 208 aaPredicted RBP8.11□□□□□ -1.11
COL4A6-202ENST00000372216 HIST1H2BAQ96A08 127 aa8.11□□□□□ -1.11
COL4A6-202ENST00000372216 IGKV2-40A0A087WW87 121 aaPredicted RBP8.1□□□□□ -1.11
COL4A6-202ENST00000372216 C15orf61A6NNL5 157 aa8.1□□□□□ -1.11
COL4A6-202ENST00000372216 IGKV2D-40P01614 121 aaPredicted RBP8.1□□□□□ -1.11
COL4A6-202ENST00000372216 HLA-DQA1P01909 254 aa8.1□□□□□ -1.11
COL4A6-202ENST00000372216 C14orf144Q96I85 54 aa8.1□□□□□ -1.11
COL4A6-202ENST00000372216 SSBP4Q9BWG4 385 aaPredicted RBP8.1□□□□□ -1.11
COL4A6-202ENST00000372216 TMEM250H0YL14 139 aa8.1□□□□□ -1.11
COL4A6-202ENST00000372216 AGAP20933 346 aa8.1□□□□□ -1.11
COL4A6-202ENST00000372216 C18orf12Q96KH6 178 aa8.1□□□□□ -1.11
COL4A6-202ENST00000372216 CABIN1Q9Y6J0 2220 aa8.1□□□□□ -1.11
COL4A6-202ENST00000372216 LINC00614P0C842 121 aa8.1□□□□□ -1.11
COL4A6-202ENST00000372216 Q5BKY6 102 aa8.1□□□□□ -1.11
COL4A6-202ENST00000372216 OR11H12B2RN74 326 aa8.1□□□□□ -1.11
COL4A6-202ENST00000372216 H3BUX3 64 aa8.1□□□□□ -1.11
COL4A6-202ENST00000372216 PAX1P15863 534 aa8.1□□□□□ -1.11
COL4A6-202ENST00000372216 PCP4P48539 62 aa8.1□□□□□ -1.11
COL4A6-202ENST00000372216 OR11H1Q8NG94 326 aa8.1□□□□□ -1.11
COL4A6-202ENST00000372216 OR11H2Q8NH07 326 aa8.1□□□□□ -1.11
COL4A6-202ENST00000372216 B3GALT5-AS1P59052 145 aa8.1□□□□□ -1.11
COL4A6-202ENST00000372216 PKIAP61925 76 aa8.1□□□□□ -1.11
COL4A6-202ENST00000372216 C2orf68Q2NKX9 166 aa8.1□□□□□ -1.11
COL4A6-202ENST00000372216 ZNF525Q8N782 197 aa8.1□□□□□ -1.11
COL4A6-202ENST00000372216 CA1P00915 261 aaPredicted RBP8.09□□□□□ -1.11
COL4A6-202ENST00000372216 RPL32P62910 135 aaKnown RBP8.09□□□□□ -1.11
COL4A6-202ENST00000372216 FMC1Q96HJ9 113 aa8.09□□□□□ -1.11
COL4A6-202ENST00000372216 A0A0A6YYD4 124 aa8.09□□□□□ -1.11
COL4A6-202ENST00000372216 B4DSR2 109 aa8.09□□□□□ -1.11
COL4A6-202ENST00000372216 NMBP08949 121 aa8.09□□□□□ -1.11
COL4A6-202ENST00000372216 IFI27P40305 119 aaPredicted RBP8.09□□□□□ -1.11
COL4A6-202ENST00000372216 PAX8Q06710 450 aa8.09□□□□□ -1.11
COL4A6-202ENST00000372216 PAPPA-AS1Q5QFB9 102 aa8.09□□□□□ -1.11
COL4A6-202ENST00000372216 SLC25A34Q6PIV7 304 aa8.09□□□□□ -1.11
COL4A6-202ENST00000372216 FAM19A2Q8N3H0 131 aa8.09□□□□□ -1.11
COL4A6-202ENST00000372216 IGHG3P01860 377 aa8.09□□□□□ -1.11
COL4A6-202ENST00000372216 CACNG8Q8WXS5 425 aa8.09□□□□□ -1.11
COL4A6-202ENST00000372216 PARD6GQ9BYG4 376 aaPredicted RBP8.09□□□□□ -1.11
COL4A6-202ENST00000372216 GPX4P36969 197 aaPredicted RBP8.09□□□□□ -1.11
COL4A6-202ENST00000372216 ATP5G3P48201 142 aa8.09□□□□□ -1.11
COL4A6-202ENST00000372216 KLHDC3Q9BQ90 382 aa8.09□□□□□ -1.11
COL4A6-202ENST00000372216 FCN3O75636 299 aa8.09□□□□□ -1.11
COL4A6-202ENST00000372216 SELLP14151 372 aa8.09□□□□□ -1.11
COL4A6-202ENST00000372216 NEUROG1Q92886 237 aa8.09□□□□□ -1.11
COL4A6-202ENST00000372216 JPT2Q9H910 190 aa8.09□□□□□ -1.11
COL4A6-202ENST00000372216 LSM4Q9Y4Z0 139 aaKnown RBP8.09□□□□□ -1.11
COL4A6-202ENST00000372216 TRAV41A0A0B4J266 112 aa8.08□□□□□ -1.12
COL4A6-202ENST00000372216 MPTX1A8MV57 137 aa8.08□□□□□ -1.12
COL4A6-202ENST00000372216 J3QRE1 110 aa8.08□□□□□ -1.12
COL4A6-202ENST00000372216 CD177Q8N6Q3 437 aa8.08□□□□□ -1.12
COL4A6-202ENST00000372216 TNFRSF14Q92956 283 aa8.08□□□□□ -1.12
COL4A6-202ENST00000372216 F5H768 121 aa8.08□□□□□ -1.12
COL4A6-202ENST00000372216 OR9G9P0C7N8 305 aa8.08□□□□□ -1.12
COL4A6-202ENST00000372216 IGHV1-8P0DP01 117 aa8.08□□□□□ -1.12
COL4A6-202ENST00000372216 CEACAM8P31997 349 aaPredicted RBP8.08□□□□□ -1.12
COL4A6-202ENST00000372216 ZNF362Q5T0B9 420 aaPredicted RBP8.08□□□□□ -1.12
COL4A6-202ENST00000372216 OR10W1Q8NGF6 305 aa8.08□□□□□ -1.12
COL4A6-202ENST00000372216 PYYP10082 97 aa8.08□□□□□ -1.12
COL4A6-202ENST00000372216 PRSS33Q8NF86 280 aa8.08□□□□□ -1.12
COL4A6-202ENST00000372216 LAMTOR3Q9UHA4 124 aa8.08□□□□□ -1.12
COL4A6-202ENST00000372216 TPTE2P1Q5T6R2 138 aa8.08□□□□□ -1.12
COL4A6-202ENST00000372216 RCC1LQ96I51 464 aaKnown RBP8.08□□□□□ -1.12
COL4A6-202ENST00000372216 SLC25A39Q9BZJ4 359 aaPredicted RBP8.08□□□□□ -1.12
COL4A6-202ENST00000372216 PVRIGQ6DKI7 326 aa8.07□□□□□ -1.12
COL4A6-202ENST00000372216 RNASE7Q9H1E1 156 aaKnown RBP8.07□□□□□ -1.12
COL4A6-202ENST00000372216 SRRM5B3KS81 715 aa8.07□□□□□ -1.12
COL4A6-202ENST00000372216 ERVH48-1M5A8F1 160 aa8.07□□□□□ -1.12
COL4A6-202ENST00000372216 COL8A2P25067 703 aa8.07□□□□□ -1.12
COL4A6-202ENST00000372216 LINC01356Q8N9X3 169 aa8.07□□□□□ -1.12
COL4A6-202ENST00000372216 IGHV3-16A0A0C4DH30 117 aa8.07□□□□□ -1.12
COL4A6-202ENST00000372216 PIP4P2Q8N4L2 257 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms