RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 HELTA6NFD8 242 aa9.46□□□□□ -0.9
PDE6C-201ENST00000371447 DLL1O00548 723 aa9.46□□□□□ -0.9
PDE6C-201ENST00000371447 ITGB1BP1O14713 200 aa9.46□□□□□ -0.9
PDE6C-201ENST00000371447 RBP4P02753 201 aa9.46□□□□□ -0.9
PDE6C-201ENST00000371447 UQCRFS1P47985 274 aa9.46□□□□□ -0.9
PDE6C-201ENST00000371447 KIAA1644Q3SXP7 199 aa9.46□□□□□ -0.9
PDE6C-201ENST00000371447 CENPWQ5EE01 88 aa9.46□□□□□ -0.9
PDE6C-201ENST00000371447 KCNIP4Q6PIL6 250 aa9.46□□□□□ -0.9
PDE6C-201ENST00000371447 OR10G8Q8NGN5 311 aa9.46□□□□□ -0.9
PDE6C-201ENST00000371447 UBTD1Q9HAC8 227 aa9.46□□□□□ -0.9
PDE6C-201ENST00000371447 TECRQ9NZ01 308 aaKnown RBP9.46□□□□□ -0.9
PDE6C-201ENST00000371447 TRAPPC1Q9Y5R8 145 aa9.46□□□□□ -0.9
PDE6C-201ENST00000371447 GNG4P50150 75 aa9.46□□□□□ -0.9
PDE6C-201ENST00000371447 PRR20EP86478 221 aa9.46□□□□□ -0.9
PDE6C-201ENST00000371447 PRR20CP86479 221 aa9.46□□□□□ -0.9
PDE6C-201ENST00000371447 PRR20DP86480 221 aa9.46□□□□□ -0.9
PDE6C-201ENST00000371447 PRR20BP86481 221 aa9.46□□□□□ -0.9
PDE6C-201ENST00000371447 PRR20AP86496 221 aa9.46□□□□□ -0.9
PDE6C-201ENST00000371447 ZNF257Q9Y2Q1 563 aa9.46□□□□□ -0.9
PDE6C-201ENST00000371447 A0A087X0M5 115 aa9.45□□□□□ -0.9
PDE6C-201ENST00000371447 A0A1B0GX30 115 aa9.45□□□□□ -0.9
PDE6C-201ENST00000371447 NCBP2LA6PVI3 153 aaKnown RBP9.45□□□□□ -0.9
PDE6C-201ENST00000371447 K7EN84 100 aa9.45□□□□□ -0.9
PDE6C-201ENST00000371447 TIMM23O14925 209 aa9.45□□□□□ -0.9
PDE6C-201ENST00000371447 CIDEAO60543 219 aa9.45□□□□□ -0.9
PDE6C-201ENST00000371447 IGHV3-23P01764 117 aa9.45□□□□□ -0.9
PDE6C-201ENST00000371447 RPL27AP46776 148 aaKnown RBP9.45□□□□□ -0.9
PDE6C-201ENST00000371447 VPS13CQ709C8 3753 aa9.45□□□□□ -0.9
PDE6C-201ENST00000371447 GGTLC3B5MD39 225 aa9.45□□□□□ -0.9
PDE6C-201ENST00000371447 PRRX1P54821 245 aa9.45□□□□□ -0.9
PDE6C-201ENST00000371447 PDPNQ86YL7 162 aa9.45□□□□□ -0.9
PDE6C-201ENST00000371447 OR8B3Q8NGG8 313 aa9.45□□□□□ -0.9
PDE6C-201ENST00000371447 VSTM2AQ8TAG5 236 aa9.45□□□□□ -0.9
PDE6C-201ENST00000371447 ZNF503Q96F45 646 aa9.45□□□□□ -0.9
PDE6C-201ENST00000371447 PACRGQ96M98 296 aaPredicted RBP9.45□□□□□ -0.9
PDE6C-201ENST00000371447 OR8B2Q96RD0 313 aa9.45□□□□□ -0.9
PDE6C-201ENST00000371447 CLEC7AQ9BXN2 247 aa9.45□□□□□ -0.9
PDE6C-201ENST00000371447 DNAJC4Q9NNZ3 241 aa9.45□□□□□ -0.9
PDE6C-201ENST00000371447 GOLT1BQ9Y3E0 138 aa9.45□□□□□ -0.9
PDE6C-201ENST00000371447 LRRK2Q5S007 2527 aa9.45□□□□□ -0.9
PDE6C-201ENST00000371447 TRBV24-1A0A075B6N3 115 aa9.44□□□□□ -0.9
PDE6C-201ENST00000371447 IGHV1-3A0A0C4DH29 117 aa9.44□□□□□ -0.9
PDE6C-201ENST00000371447 IGLV2-23P01705 113 aa9.44□□□□□ -0.9
PDE6C-201ENST00000371447 IER3P46695 156 aa9.44□□□□□ -0.9
PDE6C-201ENST00000371447 TMEM177Q53S58 311 aa9.44□□□□□ -0.9
PDE6C-201ENST00000371447 C2orf83Q53S99 150 aa9.44□□□□□ -0.9
PDE6C-201ENST00000371447 LDLRAD2Q5SZI1 272 aa9.44□□□□□ -0.9
PDE6C-201ENST00000371447 C10orf113Q5VZT2 155 aa9.44□□□□□ -0.9
PDE6C-201ENST00000371447 OR8I2Q8N0Y5 310 aa9.44□□□□□ -0.9
PDE6C-201ENST00000371447 HIST3H2BBQ8N257 126 aa9.44□□□□□ -0.9
PDE6C-201ENST00000371447 TNFRSF19Q9NS68 423 aa9.44□□□□□ -0.9
PDE6C-201ENST00000371447 LYZP61626 148 aa9.44□□□□□ -0.9
PDE6C-201ENST00000371447 LCN2P80188 198 aa9.44□□□□□ -0.9
PDE6C-201ENST00000371447 MRPL54Q6P161 138 aaKnown RBP9.44□□□□□ -0.9
PDE6C-201ENST00000371447 LINC00305Q7Z4B0 112 aa9.44□□□□□ -0.9
PDE6C-201ENST00000371447 ST6GALNAC6Q969X2 333 aa9.44□□□□□ -0.9
PDE6C-201ENST00000371447 NCOR1P1Q9H4R4 102 aa9.44□□□□□ -0.9
PDE6C-201ENST00000371447 DMRT1Q9Y5R6 373 aa9.44□□□□□ -0.9
PDE6C-201ENST00000371447 IGHV3OR16-10A0A075B7F0 116 aa9.44□□□□□ -0.9
PDE6C-201ENST00000371447 SUB1P53999 127 aaKnown RBP eCLIP9.44□□□□□ -0.9
PDE6C-201ENST00000371447 PMS2P11Q13670 270 aa9.44□□□□□ -0.9
PDE6C-201ENST00000371447 POU2AF1Q16633 256 aa9.44□□□□□ -0.9
PDE6C-201ENST00000371447 TMEM167AQ8TBQ9 72 aa9.44□□□□□ -0.9
PDE6C-201ENST00000371447 SRD5A3Q9H8P0 318 aa9.44□□□□□ -0.9
PDE6C-201ENST00000371447 LINC00574Q9H8X3 128 aa9.44□□□□□ -0.9
PDE6C-201ENST00000371447 BUB1B-PAK6H3BSN5 160 aa9.43□□□□□ -0.9
PDE6C-201ENST00000371447 C8orf88P0DMB2 117 aa9.43□□□□□ -0.9
PDE6C-201ENST00000371447 RAB4AP20338 218 aa9.43□□□□□ -0.9
PDE6C-201ENST00000371447 MFAP2P55001 183 aa9.43□□□□□ -0.9
PDE6C-201ENST00000371447 DLX6P56179 175 aa9.43□□□□□ -0.9
PDE6C-201ENST00000371447 DMRTA1Q5VZB9 504 aa9.43□□□□□ -0.9
PDE6C-201ENST00000371447 RAB1BQ9H0U4 201 aa9.43□□□□□ -0.9
PDE6C-201ENST00000371447 USP9XQ93008 2570 aaPredicted RBP9.43□□□□□ -0.9
PDE6C-201ENST00000371447 A0A1W2PN81 502 aa9.43□□□□□ -0.9
PDE6C-201ENST00000371447 PHOX2AO14813 284 aa9.43□□□□□ -0.9
PDE6C-201ENST00000371447 TEX38Q6PEX7 206 aa9.43□□□□□ -0.9
PDE6C-201ENST00000371447 RAB1CQ92928 201 aa9.43□□□□□ -0.9
PDE6C-201ENST00000371447 ANAPC16Q96DE5 110 aa9.43□□□□□ -0.9
PDE6C-201ENST00000371447 CLUHP3Q96NS8 147 aa9.43□□□□□ -0.9
PDE6C-201ENST00000371447 TCEAL7Q9BRU2 100 aa9.43□□□□□ -0.9
PDE6C-201ENST00000371447 SEBOXQ9HB31 216 aaPredicted RBP9.43□□□□□ -0.9
PDE6C-201ENST00000371447 TMEM242Q9NWH2 141 aa9.43□□□□□ -0.9
PDE6C-201ENST00000371447 MAS1LP35410 378 aa9.43□□□□□ -0.9
PDE6C-201ENST00000371447 TAS2R45P59539 299 aa9.43□□□□□ -0.9
PDE6C-201ENST00000371447 FBLN7Q53RD9 439 aa9.43□□□□□ -0.9
PDE6C-201ENST00000371447 UNQ6494/PRO21346Q6UXR6 183 aa9.43□□□□□ -0.9
PDE6C-201ENST00000371447 PPP1R27Q86WC6 154 aa9.43□□□□□ -0.9
PDE6C-201ENST00000371447 MRPL41Q8IXM3 137 aaKnown RBP9.43□□□□□ -0.9
PDE6C-201ENST00000371447 TMEM256Q8N2U0 113 aa9.43□□□□□ -0.9
PDE6C-201ENST00000371447 HIST1H2BLQ99880 126 aa9.43□□□□□ -0.9
PDE6C-201ENST00000371447 PAXXQ9BUH6 204 aa9.43□□□□□ -0.9
PDE6C-201ENST00000371447 CSMD2Q7Z408 3487 aa9.43□□□□□ -0.9
PDE6C-201ENST00000371447 CELSR2Q9HCU4 2923 aa9.42□□□□□ -0.9
PDE6C-201ENST00000371447 A0A1W2PPR1 153 aa9.42□□□□□ -0.9
PDE6C-201ENST00000371447 SH2D7A6NKC9 451 aaPredicted RBP9.42□□□□□ -0.9
PDE6C-201ENST00000371447 TNFRSF13BO14836 293 aaPredicted RBP9.42□□□□□ -0.9
PDE6C-201ENST00000371447 MC5RP33032 325 aa9.42□□□□□ -0.9
PDE6C-201ENST00000371447 TIGITQ495A1 244 aa9.42□□□□□ -0.9
PDE6C-201ENST00000371447 ZNF841Q6ZN19 808 aa9.42□□□□□ -0.9
PDE6C-201ENST00000371447 TIMD4Q96H15 378 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms