RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 PRTN3P24158 256 aa12.12□□□□□ -0.47
NDC1-201ENST00000371429 SUMO2P61956 95 aaKnown RBP12.12□□□□□ -0.47
NDC1-201ENST00000371429 ZGRF1Q86YA3 2104 aa12.11□□□□□ -0.47
NDC1-201ENST00000371429 PPP1R17O96001 155 aa12.11□□□□□ -0.47
NDC1-201ENST00000371429 SAA4P35542 130 aa12.11□□□□□ -0.47
NDC1-201ENST00000371429 C3orf56Q8N813 242 aa12.11□□□□□ -0.47
NDC1-201ENST00000371429 COQ2Q96H96 371 aa12.11□□□□□ -0.47
NDC1-201ENST00000371429 KCNS1Q96KK3 526 aa12.11□□□□□ -0.47
NDC1-201ENST00000371429 TGIF2-C20orf24A0A0A6YYL0 155 aa12.11□□□□□ -0.47
NDC1-201ENST00000371429 CD7P09564 240 aa12.11□□□□□ -0.47
NDC1-201ENST00000371429 MBNL3Q9NUK0 354 aaKnown RBP12.11□□□□□ -0.47
NDC1-201ENST00000371429 MPZP25189 248 aa12.11□□□□□ -0.47
NDC1-201ENST00000371429 TEX38Q6PEX7 206 aa12.11□□□□□ -0.47
NDC1-201ENST00000371429 NOTCH4Q99466 2003 aa12.11□□□□□ -0.47
NDC1-201ENST00000371429 A0A1B0GUT8 65 aa12.11□□□□□ -0.47
NDC1-201ENST00000371429 FABP5P3A8MUU1 101 aa12.11□□□□□ -0.47
NDC1-201ENST00000371429 ETV2O00321 342 aaPredicted RBP12.11□□□□□ -0.47
NDC1-201ENST00000371429 FAM71F2Q6NXP2 309 aa12.11□□□□□ -0.47
NDC1-201ENST00000371429 ZNF329Q86UD4 541 aa12.11□□□□□ -0.47
NDC1-201ENST00000371429 OR4D5Q8NGN0 318 aa12.11□□□□□ -0.47
NDC1-201ENST00000371429 CD33P20138 364 aa12.1□□□□□ -0.47
NDC1-201ENST00000371429 GATA3P23771 443 aa12.1□□□□□ -0.47
NDC1-201ENST00000371429 Q6P435 159 aa12.1□□□□□ -0.47
NDC1-201ENST00000371429 RNF222A6NCQ9 220 aa12.1□□□□□ -0.47
NDC1-201ENST00000371429 A6NDN8 102 aa12.1□□□□□ -0.47
NDC1-201ENST00000371429 LEPP41159 167 aa12.1□□□□□ -0.47
NDC1-201ENST00000371429 FOXA3P55318 350 aaPredicted RBP12.1□□□□□ -0.47
NDC1-201ENST00000371429 ASCL2Q99929 193 aa12.1□□□□□ -0.47
NDC1-201ENST00000371429 MEIG1Q5JSS6 88 aa12.1□□□□□ -0.47
NDC1-201ENST00000371429 Q96MF0 132 aa12.1□□□□□ -0.47
NDC1-201ENST00000371429 TAS2R60P59551 318 aa12.1□□□□□ -0.47
NDC1-201ENST00000371429 PSMG4Q5JS54 123 aa12.1□□□□□ -0.47
NDC1-201ENST00000371429 FER1L6-AS1Q8NA97 138 aa12.1□□□□□ -0.47
NDC1-201ENST00000371429 TRBV9A0A0B4J1U6 114 aa12.09□□□□□ -0.47
NDC1-201ENST00000371429 PYYP10082 97 aa12.09□□□□□ -0.47
NDC1-201ENST00000371429 KLF17Q5JT82 389 aaPredicted RBP12.09□□□□□ -0.47
NDC1-201ENST00000371429 TMEM136Q6ZRR5 245 aa12.09□□□□□ -0.47
NDC1-201ENST00000371429 LGALS3P17931 250 aaKnown RBP12.09□□□□□ -0.47
NDC1-201ENST00000371429 CIRBPQ14011 172 aaKnown RBP12.09□□□□□ -0.47
NDC1-201ENST00000371429 PIP4P2Q8N4L2 257 aa12.09□□□□□ -0.47
NDC1-201ENST00000371429 ZMAT5Q9UDW3 170 aaKnown RBP12.09□□□□□ -0.47
NDC1-201ENST00000371429 H0YJW9 148 aa12.09□□□□□ -0.47
NDC1-201ENST00000371429 SLC17A3O00476 420 aa12.09□□□□□ -0.47
NDC1-201ENST00000371429 RAB37Q96AX2 223 aa12.09□□□□□ -0.47
NDC1-201ENST00000371429 RPP21Q9H633 154 aaKnown RBP12.09□□□□□ -0.47
NDC1-201ENST00000371429 WDR83OSQ9Y284 106 aa12.09□□□□□ -0.47
NDC1-201ENST00000371429 LDLRAD4O15165 306 aa12.08□□□□□ -0.48
NDC1-201ENST00000371429 BTCP35070 178 aa12.08□□□□□ -0.48
NDC1-201ENST00000371429 DEFB121Q5J5C9 76 aa12.08□□□□□ -0.48
NDC1-201ENST00000371429 SIGLEC15Q6ZMC9 328 aa12.08□□□□□ -0.48
NDC1-201ENST00000371429 RNF144BQ7Z419 303 aa12.08□□□□□ -0.48
NDC1-201ENST00000371429 ATG101Q9BSB4 218 aa12.08□□□□□ -0.48
NDC1-201ENST00000371429 TMEM70Q9BUB7 260 aa12.08□□□□□ -0.48
NDC1-201ENST00000371429 RNF126Q9BV68 326 aa12.08□□□□□ -0.48
NDC1-201ENST00000371429 CMC4P56277 68 aaPredicted RBP12.08□□□□□ -0.48
NDC1-201ENST00000371429 GNG5P63218 68 aa12.08□□□□□ -0.48
NDC1-201ENST00000371429 SPSB3Q6PJ21 355 aa12.08□□□□□ -0.48
NDC1-201ENST00000371429 LRTM2Q8N967 370 aa12.08□□□□□ -0.48
NDC1-201ENST00000371429 GTF3C1Q12789 2109 aa12.08□□□□□ -0.48
NDC1-201ENST00000371429 KLHL30-AS1Q8NEE0 82 aa12.08□□□□□ -0.48
NDC1-201ENST00000371429 PRELID3AQ96N28 172 aa12.08□□□□□ -0.48
NDC1-201ENST00000371429 FAM215AQ9Y5M1 114 aa12.08□□□□□ -0.48
NDC1-201ENST00000371429 Q6AWC8 147 aa12.08□□□□□ -0.48
NDC1-201ENST00000371429 SELENOKQ9Y6D0 94 aa12.08□□□□□ -0.48
NDC1-201ENST00000371429 TANC1Q9C0D5 1861 aa12.07□□□□□ -0.48
NDC1-201ENST00000371429 PIEZO1Q92508 2521 aa12.07□□□□□ -0.48
NDC1-201ENST00000371429 CBLN1P23435 193 aa12.07□□□□□ -0.48
NDC1-201ENST00000371429 FBLN7Q53RD9 439 aa12.07□□□□□ -0.48
NDC1-201ENST00000371429 KIR3DL3Q8N743 410 aa12.07□□□□□ -0.48
NDC1-201ENST00000371429 TRAV21A0A0B4J279 112 aa12.07□□□□□ -0.48
NDC1-201ENST00000371429 LHFPL1Q86WI0 220 aa12.07□□□□□ -0.48
NDC1-201ENST00000371429 RNF114Q9Y508 228 aa12.07□□□□□ -0.48
NDC1-201ENST00000371429 TRBV6-6A0A0A6YYG2 114 aa12.07□□□□□ -0.48
NDC1-201ENST00000371429 A0A1B0GWJ7 208 aa12.07□□□□□ -0.48
NDC1-201ENST00000371429 LCNL1Q6ZST4 164 aa12.07□□□□□ -0.48
NDC1-201ENST00000371429 SIGLEC9Q9Y336 463 aa12.07□□□□□ -0.48
NDC1-201ENST00000371429 A0A087X0M5 115 aa12.06□□□□□ -0.48
NDC1-201ENST00000371429 A0A1B0GX30 115 aa12.06□□□□□ -0.48
NDC1-201ENST00000371429 ZNF383Q8NA42 475 aa12.06□□□□□ -0.48
NDC1-201ENST00000371429 OR5AN1Q8NGI8 311 aa12.06□□□□□ -0.48
NDC1-201ENST00000371429 EPDR1Q9UM22 224 aa12.06□□□□□ -0.48
NDC1-201ENST00000371429 C5orf24Q7Z6I8 188 aa12.06□□□□□ -0.48
NDC1-201ENST00000371429 TECTAO75443 2155 aa12.06□□□□□ -0.48
NDC1-201ENST00000371429 TMEM238LA0A1B0GVL6 79 aa12.06□□□□□ -0.48
NDC1-201ENST00000371429 A6NJY4 79 aa12.06□□□□□ -0.48
NDC1-201ENST00000371429 OVOL1O14753 267 aa12.06□□□□□ -0.48
NDC1-201ENST00000371429 EFNB3Q15768 340 aa12.06□□□□□ -0.48
NDC1-201ENST00000371429 A0A1W2PRE2 83 aa12.06□□□□□ -0.48
NDC1-201ENST00000371429 PSG1P11464 419 aa12.06□□□□□ -0.48
NDC1-201ENST00000371429 LY6G6FQ5SQ64 297 aa12.06□□□□□ -0.48
NDC1-201ENST00000371429 IL36BQ9NZH7 164 aa12.06□□□□□ -0.48
NDC1-201ENST00000371429 C7orf71A4D174 169 aa12.05□□□□□ -0.48
NDC1-201ENST00000371429 H7C2G1 150 aa12.05□□□□□ -0.48
NDC1-201ENST00000371429 SRP19P09132 144 aaKnown RBP12.05□□□□□ -0.48
NDC1-201ENST00000371429 FOLR2P14207 255 aa12.05□□□□□ -0.48
NDC1-201ENST00000371429 WT1P19544 449 aaPredicted RBP12.05□□□□□ -0.48
NDC1-201ENST00000371429 WFDC12Q8WWY7 111 aa12.05□□□□□ -0.48
NDC1-201ENST00000371429 USMG5Q96IX5 58 aa12.05□□□□□ -0.48
NDC1-201ENST00000371429 H0YIZ8 118 aa12.05□□□□□ -0.48
NDC1-201ENST00000371429 PSG8Q9UQ74 426 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms