RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 F11RQ9Y624 299 aaKnown RBP12.33□□□□□ -0.44
PFDN4-201ENST00000371419 CEBPZOSA8MTT3 80 aa12.32□□□□□ -0.44
PFDN4-201ENST00000371419 H3BP45 60 aa12.32□□□□□ -0.44
PFDN4-201ENST00000371419 ATP6V1FQ16864 119 aa12.32□□□□□ -0.44
PFDN4-201ENST00000371419 C15orf32Q32M92 178 aa12.32□□□□□ -0.44
PFDN4-201ENST00000371419 SPANXN5Q5MJ07 72 aa12.32□□□□□ -0.44
PFDN4-201ENST00000371419 TMEM14EPQ6UXP3 125 aa12.32□□□□□ -0.44
PFDN4-201ENST00000371419 OR11H1Q8NG94 326 aa12.32□□□□□ -0.44
PFDN4-201ENST00000371419 OR1L6Q8NGR2 347 aa12.32□□□□□ -0.44
PFDN4-201ENST00000371419 OR1N2Q8NGR9 330 aa12.32□□□□□ -0.44
PFDN4-201ENST00000371419 OR1P1Q8NH06 330 aa12.32□□□□□ -0.44
PFDN4-201ENST00000371419 DTD1Q8TEA8 209 aa12.32□□□□□ -0.44
PFDN4-201ENST00000371419 DUX3Q96PT4 197 aa12.32□□□□□ -0.44
PFDN4-201ENST00000371419 P2RX4Q99571 388 aa12.32□□□□□ -0.44
PFDN4-201ENST00000371419 THYN1Q9P016 225 aa12.32□□□□□ -0.44
PFDN4-201ENST00000371419 NDUFB8O95169 186 aa12.31□□□□□ -0.44
PFDN4-201ENST00000371419 METTL15P1P0C7V9 234 aa12.31□□□□□ -0.44
PFDN4-201ENST00000371419 RPP30P78346 268 aaKnown RBP12.31□□□□□ -0.44
PFDN4-201ENST00000371419 PXDC1Q5TGL8 231 aa12.31□□□□□ -0.44
PFDN4-201ENST00000371419 SLC25A24Q6NUK1 477 aa12.31□□□□□ -0.44
PFDN4-201ENST00000371419 ZNF343Q6P1L6 599 aa12.31□□□□□ -0.44
PFDN4-201ENST00000371419 ZNF114Q8NC26 417 aa12.31□□□□□ -0.44
PFDN4-201ENST00000371419 SCGB1C1Q8TD33 95 aa12.31□□□□□ -0.44
PFDN4-201ENST00000371419 DPF1Q92782 380 aa12.31□□□□□ -0.44
PFDN4-201ENST00000371419 PARD6GQ9BYG4 376 aaPredicted RBP12.31□□□□□ -0.44
PFDN4-201ENST00000371419 DMRT1Q9Y5R6 373 aa12.31□□□□□ -0.44
PFDN4-201ENST00000371419 OR8U8P0C7N1 319 aa12.3□□□□□ -0.44
PFDN4-201ENST00000371419 ATP6V0CP27449 155 aa12.3□□□□□ -0.44
PFDN4-201ENST00000371419 SNCAP37840 140 aa12.3□□□□□ -0.44
PFDN4-201ENST00000371419 CAMLGP49069 296 aa12.3□□□□□ -0.44
PFDN4-201ENST00000371419 MFAP2P55001 183 aa12.3□□□□□ -0.44
PFDN4-201ENST00000371419 ZNF616Q08AN1 781 aa12.3□□□□□ -0.44
PFDN4-201ENST00000371419 FHL3Q13643 280 aa12.3□□□□□ -0.44
PFDN4-201ENST00000371419 Q6ZRG5 221 aa12.3□□□□□ -0.44
PFDN4-201ENST00000371419 CCDC28AQ8IWP9 274 aa12.3□□□□□ -0.44
PFDN4-201ENST00000371419 CMYA5Q8N3K9 4069 aa12.29□□□□□ -0.44
PFDN4-201ENST00000371419 HSPB1P04792 205 aaKnown RBP12.29□□□□□ -0.44
PFDN4-201ENST00000371419 FAM209BQ5JX69 171 aa12.29□□□□□ -0.44
PFDN4-201ENST00000371419 BTNL8Q6UX41 500 aa12.29□□□□□ -0.44
PFDN4-201ENST00000371419 LILRB2Q8N423 598 aa12.29□□□□□ -0.44
PFDN4-201ENST00000371419 LINC00482Q8N8I6 264 aa12.29□□□□□ -0.44
PFDN4-201ENST00000371419 OR2G3Q8NGZ4 309 aa12.29□□□□□ -0.44
PFDN4-201ENST00000371419 PINX1Q96BK5 328 aaKnown RBP12.29□□□□□ -0.44
PFDN4-201ENST00000371419 HIPK2Q9H2X6 1198 aa12.29□□□□□ -0.44
PFDN4-201ENST00000371419 HRH4Q9H3N8 390 aa12.29□□□□□ -0.44
PFDN4-201ENST00000371419 HEYLQ9NQ87 328 aaPredicted RBP12.29□□□□□ -0.44
PFDN4-201ENST00000371419 PLA2G2EQ9NZK7 142 aa12.29□□□□□ -0.44
PFDN4-201ENST00000371419 IGHV4OR15-8A0A075B7B6 117 aa12.28□□□□□ -0.44
PFDN4-201ENST00000371419 A0A087WW49 117 aa12.28□□□□□ -0.44
PFDN4-201ENST00000371419 LINC01619G3V211 115 aa12.28□□□□□ -0.44
PFDN4-201ENST00000371419 SUB1P53999 127 aaKnown RBP eCLIP12.28□□□□□ -0.44
PFDN4-201ENST00000371419 DPPA3Q6W0C5 159 aa12.28□□□□□ -0.44
PFDN4-201ENST00000371419 WFDC9Q8NEX5 89 aa12.28□□□□□ -0.44
PFDN4-201ENST00000371419 LYPD6BQ8NI32 183 aa12.28□□□□□ -0.44
PFDN4-201ENST00000371419 EEF1AKMT3Q96AZ1 226 aa12.28□□□□□ -0.44
PFDN4-201ENST00000371419 SH3BGRL3Q9H299 93 aa12.28□□□□□ -0.44
PFDN4-201ENST00000371419 PEF1Q9UBV8 284 aaKnown RBP12.28□□□□□ -0.44
PFDN4-201ENST00000371419 CD33P20138 364 aa12.27□□□□□ -0.44
PFDN4-201ENST00000371419 SLC38A11Q08AI6 406 aa12.27□□□□□ -0.44
PFDN4-201ENST00000371419 TMEM182Q6ZP80 229 aaPredicted RBP12.27□□□□□ -0.44
PFDN4-201ENST00000371419 HAPLN4Q86UW8 402 aa12.27□□□□□ -0.44
PFDN4-201ENST00000371419 OR10P1Q8NGE3 313 aa12.27□□□□□ -0.44
PFDN4-201ENST00000371419 VN1R17PQ8TDU5 208 aa12.27□□□□□ -0.44
PFDN4-201ENST00000371419 LINC00052Q96N35 136 aa12.27□□□□□ -0.44
PFDN4-201ENST00000371419 PSMG3Q9BT73 122 aaPredicted RBP12.27□□□□□ -0.44
PFDN4-201ENST00000371419 NOTCH3Q9UM47 2321 aa12.27□□□□□ -0.44
PFDN4-201ENST00000371419 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.27□□□□□ -0.45
PFDN4-201ENST00000371419 TRBV7-1A0A0A6YYK4 115 aa12.27□□□□□ -0.45
PFDN4-201ENST00000371419 RNASE2P10153 161 aaKnown RBP12.27□□□□□ -0.45
PFDN4-201ENST00000371419 ARL16Q0P5N6 197 aa12.27□□□□□ -0.45
PFDN4-201ENST00000371419 BSXQ3C1V8 233 aa12.27□□□□□ -0.45
PFDN4-201ENST00000371419 MISP3Q96FF7 219 aa12.27□□□□□ -0.45
PFDN4-201ENST00000371419 OR4C12Q96R67 309 aa12.27□□□□□ -0.45
PFDN4-201ENST00000371419 TMEM147Q9BVK8 224 aa12.27□□□□□ -0.45
PFDN4-201ENST00000371419 S4R3C0 116 aa12.27□□□□□ -0.45
PFDN4-201ENST00000371419 TRBV12-3P01733 135 aa12.26□□□□□ -0.45
PFDN4-201ENST00000371419 IGHV3-23P01764 117 aa12.26□□□□□ -0.45
PFDN4-201ENST00000371419 AKR1C8PQ5T2L2 129 aa12.26□□□□□ -0.45
PFDN4-201ENST00000371419 OR8G2PQ6IF36 304 aa12.26□□□□□ -0.45
PFDN4-201ENST00000371419 TIMM9Q9Y5J7 89 aa12.26□□□□□ -0.45
PFDN4-201ENST00000371419 NBEAL1Q6ZS30 2694 aa12.25□□□□□ -0.45
PFDN4-201ENST00000371419 PMS2P5A8MQ11 134 aa12.25□□□□□ -0.45
PFDN4-201ENST00000371419 K7EIM0 57 aa12.25□□□□□ -0.45
PFDN4-201ENST00000371419 CORTO00230 105 aa12.25□□□□□ -0.45
PFDN4-201ENST00000371419 HOXD3P31249 432 aaPredicted RBP12.25□□□□□ -0.45
PFDN4-201ENST00000371419 SLURP1P55000 103 aa12.25□□□□□ -0.45
PFDN4-201ENST00000371419 SERF2P84101 59 aa12.25□□□□□ -0.45
PFDN4-201ENST00000371419 PVRIGQ6DKI7 326 aa12.25□□□□□ -0.45
PFDN4-201ENST00000371419 CLEC19AQ6UXS0 136 aa12.25□□□□□ -0.45
PFDN4-201ENST00000371419 SLC24A4Q8NFF2 622 aa12.25□□□□□ -0.45
PFDN4-201ENST00000371419 BPIFCQ8NFQ6 507 aa12.25□□□□□ -0.45
PFDN4-201ENST00000371419 FAM213BQ8TBF2 198 aa12.25□□□□□ -0.45
PFDN4-201ENST00000371419 ZNF502Q8TBZ5 544 aa12.25□□□□□ -0.45
PFDN4-201ENST00000371419 CCDC140Q96MF4 163 aa12.25□□□□□ -0.45
PFDN4-201ENST00000371419 WDR61Q9GZS3 305 aaKnown RBP12.25□□□□□ -0.45
PFDN4-201ENST00000371419 IGHV3-21A0A0B4J1V1 117 aa12.24□□□□□ -0.45
PFDN4-201ENST00000371419 I3L2K1 104 aa12.24□□□□□ -0.45
PFDN4-201ENST00000371419 MT-CO2P00403 227 aa12.24□□□□□ -0.45
PFDN4-201ENST00000371419 ATP5IP56385 69 aaPredicted RBP12.24□□□□□ -0.45
PFDN4-201ENST00000371419 RAB2AP61019 212 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms