RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 NGFP01138 241 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 ATP5G1P05496 136 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 EBI3Q14213 229 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 ZNF718Q3SXZ3 478 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 ZNF833PQ6ZTB9 187 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 TOMM5Q8N4H5 51 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 OR10G7Q8NGN6 311 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 ZNF418Q8TF45 676 aaPredicted RBP3.03□□□□□ -1.92
MCF2-203ENST00000370576 RNASE6Q93091 150 aaKnown RBP3.03□□□□□ -1.92
MCF2-203ENST00000370576 ARHGAP5-AS1Q96IT6 56 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 HYLS1Q96M11 299 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 UQCC1Q9NVA1 299 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 ASPMQ8IZT6 3477 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 TET2Q6N021 2002 aaPredicted RBP3.03□□□□□ -1.92
MCF2-203ENST00000370576 IGKV1D-17A0A075B6S4 117 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 A0A087WZ39 114 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 CYSRT1A8MQ03 144 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 FAM166BA8MTA8 275 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 F6UZH7 168 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 INMT-MINDY4F8WBC2 141 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 K7N7A8 449 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 EEF1E1O43324 174 aaKnown RBP3.03□□□□□ -1.92
MCF2-203ENST00000370576 PROP1O75360 226 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 FSHBP01225 129 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 CD3DP04234 171 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 CXCL3P19876 107 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 PVALBP20472 110 aaPredicted RBP3.03□□□□□ -1.92
MCF2-203ENST00000370576 HLA-DRB3P79483 266 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 PYDC2Q56P42 97 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 CD177Q8N6Q3 437 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 PHLDA1Q8WV24 401 aaPredicted RBP3.03□□□□□ -1.92
MCF2-203ENST00000370576 GAFA1Q96PS6 74 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 SUCNR1Q9BXA5 334 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 ZNF581Q9P0T4 197 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 PROCRQ9UNN8 238 aa3.03□□□□□ -1.92
MCF2-203ENST00000370576 SMG1Q96Q15 3661 aaKnown RBP3.03□□□□□ -1.92
MCF2-203ENST00000370576 DPRXA6NFQ7 191 aa3.03□□□□□ -1.93
MCF2-203ENST00000370576 ODF3BA8MYP8 253 aa3.03□□□□□ -1.93
MCF2-203ENST00000370576 MCRIP1C9JLW8 97 aa3.03□□□□□ -1.93
MCF2-203ENST00000370576 GATA2P23769 480 aaPredicted RBP3.03□□□□□ -1.93
MCF2-203ENST00000370576 FAUP35544 74 aaKnown RBP3.03□□□□□ -1.93
MCF2-203ENST00000370576 ZNF154Q13106 437 aa3.03□□□□□ -1.93
MCF2-203ENST00000370576 DEFB109BQ30KR1 87 aa3.03□□□□□ -1.93
MCF2-203ENST00000370576 TMEM155Q4W5P6 130 aa3.03□□□□□ -1.93
MCF2-203ENST00000370576 CLLU1Q5K131 121 aa3.03□□□□□ -1.93
MCF2-203ENST00000370576 ZNF114Q8NC26 417 aa3.03□□□□□ -1.93
MCF2-203ENST00000370576 OR2K2Q8NGT1 345 aa3.03□□□□□ -1.93
MCF2-203ENST00000370576 CLCC1Q96S66 551 aa3.03□□□□□ -1.93
MCF2-203ENST00000370576 RTL8AQ9BWD3 113 aa3.03□□□□□ -1.93
MCF2-203ENST00000370576 BORCS7-ASMTA0A0B4J1R7 106 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 FAM236DA0A1B0GTK5 79 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 H0YJW9 148 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 HAX1O00165 279 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 SOX15O60248 233 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 GNG7O60262 68 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 IGKV1-39P01597 117 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 MAS1P04201 325 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 IGKV1D-39P04432 117 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 FAM236CP0DP71 79 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 NDUFA6P56556 154 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 DHRS2Q13268 280 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 FOXI2Q6ZQN5 318 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 LINC01587Q99440 93 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 TRAV38-1A0A0B4J264 116 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 IGHV1-46P01743 117 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 ZNF20P17024 532 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 ORM2P19652 201 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 EVI2AP22794 236 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 GPR183P32249 361 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 G6PCP35575 357 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 GABRA2P47869 451 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 BEAN1Q3B7T3 259 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 FAAP20Q6NZ36 180 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 TRAPPC6BQ86SZ2 158 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 CIARTQ8N365 385 aaPredicted RBP3.02□□□□□ -1.93
MCF2-203ENST00000370576 RPRMLQ8N4K4 120 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 Q8N6K4 173 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 SUMF2Q8NBJ7 301 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 SLC25A40Q8TBP6 338 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 CMBLQ96DG6 245 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 EHFQ9NZC4 300 aa3.02□□□□□ -1.93
MCF2-203ENST00000370576 TRGV8A0A0C4DH27 118 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 MAP1LC3B2A6NCE7 125 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 TIMM23O14925 209 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 LGALS1P09382 135 aaKnown RBP3.01□□□□□ -1.93
MCF2-203ENST00000370576 SMIM17P0DL12 118 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 CD99P14209 185 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 DYNLT3P51808 116 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 RIPPLY3P57055 190 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 RPS23P62266 143 aaKnown RBP3.01□□□□□ -1.93
MCF2-203ENST00000370576 BTN1A1Q13410 526 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 FCN2Q15485 313 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 ZNF506Q5JVG8 444 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 HCP5Q6MZN7 132 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 FA2HQ7L5A8 372 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 NUP35Q8NFH5 326 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 OR2G3Q8NGZ4 309 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 OR13C6PQ8NH95 151 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 SEC22AQ96IW7 307 aa3.01□□□□□ -1.93
MCF2-203ENST00000370576 C17orf77Q96MU5 243 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms