RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 PRR25Q96S07 402 aa11.27□□□□□ -0.61
COL9A1-204ENST00000370496 GINS3Q9BRX5 216 aa11.27□□□□□ -0.61
COL9A1-204ENST00000370496 PUS1Q9Y606 427 aaKnown RBP eCLIP11.27□□□□□ -0.61
COL9A1-204ENST00000370496 C7orf66A4D0T2 115 aa11.26□□□□□ -0.61
COL9A1-204ENST00000370496 K7EPK0 472 aa11.26□□□□□ -0.61
COL9A1-204ENST00000370496 ZNF207O43670 478 aaKnown RBP11.26□□□□□ -0.61
COL9A1-204ENST00000370496 IGLC1P0CG04 106 aa11.26□□□□□ -0.61
COL9A1-204ENST00000370496 PVALBP20472 110 aaPredicted RBP11.26□□□□□ -0.61
COL9A1-204ENST00000370496 CBLN1P23435 193 aa11.26□□□□□ -0.61
COL9A1-204ENST00000370496 GPX4P36969 197 aaPredicted RBP11.26□□□□□ -0.61
COL9A1-204ENST00000370496 BTNL8Q6UX41 500 aa11.26□□□□□ -0.61
COL9A1-204ENST00000370496 MRAPQ8TCY5 172 aa11.26□□□□□ -0.61
COL9A1-204ENST00000370496 ALG5Q9Y673 324 aa11.26□□□□□ -0.61
COL9A1-204ENST00000370496 TSC22D2O75157 780 aa11.25□□□□□ -0.61
COL9A1-204ENST00000370496 SIX6O95475 246 aa11.25□□□□□ -0.61
COL9A1-204ENST00000370496 BCAP31P51572 246 aa11.25□□□□□ -0.61
COL9A1-204ENST00000370496 TAS2R30P59541 319 aa11.25□□□□□ -0.61
COL9A1-204ENST00000370496 AKR1C1Q04828 323 aa11.25□□□□□ -0.61
COL9A1-204ENST00000370496 OR8G2PQ6IF36 304 aa11.25□□□□□ -0.61
COL9A1-204ENST00000370496 ADAMTSL5Q6ZMM2 481 aa11.25□□□□□ -0.61
COL9A1-204ENST00000370496 ACOT7LQ6ZUV0 252 aa11.25□□□□□ -0.61
COL9A1-204ENST00000370496 OR2K2Q8NGT1 345 aa11.25□□□□□ -0.61
COL9A1-204ENST00000370496 TECRQ9NZ01 308 aaKnown RBP11.25□□□□□ -0.61
COL9A1-204ENST00000370496 MRPL27Q9P0M9 148 aaKnown RBP11.25□□□□□ -0.61
COL9A1-204ENST00000370496 MGAT4CQ9UBM8 478 aa11.25□□□□□ -0.61
COL9A1-204ENST00000370496 WI2-2373I1.2A0A1W2PRP0 233 aa11.24□□□□□ -0.61
COL9A1-204ENST00000370496 SMCO3A2RU48 225 aa11.24□□□□□ -0.61
COL9A1-204ENST00000370496 ZFP92A6NM28 416 aa11.24□□□□□ -0.61
COL9A1-204ENST00000370496 IGKV1-17P01599 117 aa11.24□□□□□ -0.61
COL9A1-204ENST00000370496 METTL15P1P0C7V9 234 aa11.24□□□□□ -0.61
COL9A1-204ENST00000370496 GP9P14770 177 aa11.24□□□□□ -0.61
COL9A1-204ENST00000370496 CAV2P51636 162 aa11.24□□□□□ -0.61
COL9A1-204ENST00000370496 PAX9P55771 341 aa11.24□□□□□ -0.61
COL9A1-204ENST00000370496 RAB32Q13637 225 aa11.24□□□□□ -0.61
COL9A1-204ENST00000370496 GAMTQ14353 236 aa11.24□□□□□ -0.61
COL9A1-204ENST00000370496 CD300EQ496F6 205 aaPredicted RBP11.24□□□□□ -0.61
COL9A1-204ENST00000370496 TOMM20LQ6UXN7 152 aa11.24□□□□□ -0.61
COL9A1-204ENST00000370496 MLXQ9UH92 298 aa11.24□□□□□ -0.61
COL9A1-204ENST00000370496 SELENOKQ9Y6D0 94 aa11.24□□□□□ -0.61
COL9A1-204ENST00000370496 DNAH3Q8TD57 4116 aa11.24□□□□□ -0.61
COL9A1-204ENST00000370496 PRSS46E5RG02 174 aa11.23□□□□□ -0.61
COL9A1-204ENST00000370496 K7EMT4 169 aa11.23□□□□□ -0.61
COL9A1-204ENST00000370496 CYCSP99999 105 aaKnown RBP11.23□□□□□ -0.61
COL9A1-204ENST00000370496 LRRC37A5PQ49AS3 106 aa11.23□□□□□ -0.61
COL9A1-204ENST00000370496 TMEM14EPQ6UXP3 125 aa11.23□□□□□ -0.61
COL9A1-204ENST00000370496 ZNF414Q96IQ9 312 aa11.23□□□□□ -0.61
COL9A1-204ENST00000370496 NMES1Q9C002 83 aa11.23□□□□□ -0.61
COL9A1-204ENST00000370496 ZFAND3Q9H8U3 227 aa11.23□□□□□ -0.61
COL9A1-204ENST00000370496 IGHV7-4-1A0A0J9YVY3 117 aa11.22□□□□□ -0.61
COL9A1-204ENST00000370496 IZUMO1RA6ND01 250 aa11.22□□□□□ -0.61
COL9A1-204ENST00000370496 K7EIL1 84 aa11.22□□□□□ -0.61
COL9A1-204ENST00000370496 CCNKO75909 580 aa11.22□□□□□ -0.61
COL9A1-204ENST00000370496 FABP1P07148 127 aa11.22□□□□□ -0.61
COL9A1-204ENST00000370496 BMI1P35226 326 aa11.22□□□□□ -0.61
COL9A1-204ENST00000370496 H2BFSP57053 126 aa11.22□□□□□ -0.61
COL9A1-204ENST00000370496 YPEL3P61236 119 aaPredicted RBP11.22□□□□□ -0.61
COL9A1-204ENST00000370496 RRAS2P62070 204 aaPredicted RBP11.22□□□□□ -0.61
COL9A1-204ENST00000370496 GUCA2BQ16661 112 aa11.22□□□□□ -0.61
COL9A1-204ENST00000370496 DEFB114Q30KQ6 69 aa11.22□□□□□ -0.61
COL9A1-204ENST00000370496 GTSCR1Q86UQ5 136 aa11.22□□□□□ -0.61
COL9A1-204ENST00000370496 OR10P1Q8NGE3 313 aa11.22□□□□□ -0.61
COL9A1-204ENST00000370496 Q8WTZ3 238 aa11.22□□□□□ -0.61
COL9A1-204ENST00000370496 METTL26Q96S19 204 aa11.22□□□□□ -0.61
COL9A1-204ENST00000370496 IGHV3-49A0A0A0MS15 119 aa11.21□□□□□ -0.61
COL9A1-204ENST00000370496 TRAV14DV4A0A0A6YYC5 116 aa11.21□□□□□ -0.61
COL9A1-204ENST00000370496 TOMM40O96008 361 aa11.21□□□□□ -0.61
COL9A1-204ENST00000370496 C8orf88P0DMB2 117 aa11.21□□□□□ -0.61
COL9A1-204ENST00000370496 RBPMS2Q6ZRY4 209 aaKnown RBP11.21□□□□□ -0.61
COL9A1-204ENST00000370496 STX12Q86Y82 276 aa11.21□□□□□ -0.61
COL9A1-204ENST00000370496 TMEM61Q8N0U2 210 aa11.21□□□□□ -0.61
COL9A1-204ENST00000370496 NARS2Q96I59 477 aaKnown RBP11.21□□□□□ -0.61
COL9A1-204ENST00000370496 DEDDO75618 318 aa11.2□□□□□ -0.62
COL9A1-204ENST00000370496 SCAF4O95104 1147 aaKnown RBP11.2□□□□□ -0.62
COL9A1-204ENST00000370496 RLN2P04090 185 aa11.2□□□□□ -0.62
COL9A1-204ENST00000370496 IL4P05112 153 aa11.2□□□□□ -0.62
COL9A1-204ENST00000370496 PET100P0DJ07 73 aa11.2□□□□□ -0.62
COL9A1-204ENST00000370496 RD3LP0DJH9 198 aa11.2□□□□□ -0.62
COL9A1-204ENST00000370496 DLK1P80370 383 aa11.2□□□□□ -0.62
COL9A1-204ENST00000370496 IL15RAQ13261 267 aa11.2□□□□□ -0.62
COL9A1-204ENST00000370496 WDR89Q96FK6 387 aaPredicted RBP11.2□□□□□ -0.62
COL9A1-204ENST00000370496 MED28Q9H204 178 aa11.2□□□□□ -0.62
COL9A1-204ENST00000370496 TMEM231Q9H6L2 316 aa11.2□□□□□ -0.62
COL9A1-204ENST00000370496 LYRM2Q9NU23 88 aaPredicted RBP11.2□□□□□ -0.62
COL9A1-204ENST00000370496 SMPXQ9UHP9 88 aa11.2□□□□□ -0.62
COL9A1-204ENST00000370496 SORL1Q92673 2214 aa11.2□□□□□ -0.62
COL9A1-204ENST00000370496 IGKV1D-37A0A075B6S9 117 aa11.19□□□□□ -0.62
COL9A1-204ENST00000370496 IGHV3OR16-13A0A075B7E8 117 aa11.19□□□□□ -0.62
COL9A1-204ENST00000370496 IGHV3-74A0A0B4J1X5 117 aa11.19□□□□□ -0.62
COL9A1-204ENST00000370496 PMS2P5A8MQ11 134 aa11.19□□□□□ -0.62
COL9A1-204ENST00000370496 PSG1P11464 419 aa11.19□□□□□ -0.62
COL9A1-204ENST00000370496 NPPCP23582 126 aa11.19□□□□□ -0.62
COL9A1-204ENST00000370496 ZNF90Q03938 601 aa11.19□□□□□ -0.62
COL9A1-204ENST00000370496 OXA1LQ15070 435 aa11.19□□□□□ -0.62
COL9A1-204ENST00000370496 DEFB121Q5J5C9 76 aa11.19□□□□□ -0.62
COL9A1-204ENST00000370496 LAMTOR1Q6IAA8 161 aa11.19□□□□□ -0.62
COL9A1-204ENST00000370496 THAP8Q8NA92 274 aa11.19□□□□□ -0.62
COL9A1-204ENST00000370496 OR51G1Q8NGK1 321 aa11.19□□□□□ -0.62
COL9A1-204ENST00000370496 PPP1R1CQ8WVI7 109 aa11.19□□□□□ -0.62
COL9A1-204ENST00000370496 TRGV9Q99603 122 aa11.19□□□□□ -0.62
COL9A1-204ENST00000370496 RHPN1-AS1Q9BWJ2 59 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms