RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 SMAGPQ0VAQ4 97 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 RASL11AQ6T310 242 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 C2orf91Q6ZV80 131 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 FAM58AQ8N1B3 248 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 TTC9CQ8N5M4 171 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 HDHD3Q9BSH5 251 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-204ENST00000369530 DERL1Q9BUN8 251 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 GTSF1LQ9H1H1 148 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 TRAPPC2LQ9UL33 140 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 UBE2J1Q9Y385 318 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-204ENST00000369530 HEATR1Q9H583 2144 aaKnown RBP5.58□□□□□ -1.52
CSDE1-204ENST00000369530 ZNF816-ZNF321PA0A0X1KG74 233 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 C7orf71A4D174 169 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-204ENST00000369530 IGHV4-31P0DP07 118 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 VDAC1P21796 283 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 PSMB3P49720 205 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 GAGE5Q13069 117 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 GAGE6Q13070 117 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 ABCA11PQ4W5N1 156 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 WDR86Q86TI4 376 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 GRAMD2BQ96HH9 432 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 DIDO1Q9BTC0 2240 aaKnown RBP5.57□□□□□ -1.52
CSDE1-204ENST00000369530 PIGYQ3MUY2 71 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 MKXQ8IYA7 352 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 VSTM2AQ8TAG5 236 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 PLPPR2Q96GM1 343 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 RAB1BQ9H0U4 201 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 FZR1Q9UM11 496 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 DNAH17Q9UFH2 4485 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 SPTBN1Q01082 2364 aaKnown RBP5.57□□□□□ -1.52
CSDE1-204ENST00000369530 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.57□□□□□ -1.52
CSDE1-204ENST00000369530 TRAV34A0A0B4J273 112 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-204ENST00000369530 IFNA5P01569 189 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 GRPP07492 148 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 CA6P23280 308 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 NKX2-1P43699 371 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-204ENST00000369530 FAM120AOSQ5T036 256 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 SLC25A34Q6PIV7 304 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 BAGE3Q86Y29 109 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 BAGE2Q86Y30 109 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 GCSAMQ8N6F7 178 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 OR4A5Q8NH83 315 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 CYYR1Q96J86 154 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 OR2D2Q9H210 308 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 SPANXB1Q9NS25 103 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-204ENST00000369530 DUSP13Q9UII6 198 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 ZNF391Q9UJN7 358 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 FAM181BA6NEQ2 426 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 FABP6P51161 128 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 TBC1D28Q2M2D7 210 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 TMEM136Q6ZRR5 245 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 TCF23Q7RTU1 214 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 SPATA12Q7Z6I5 190 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 MDP1Q86V88 176 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 ZNF525Q8N782 197 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 OR2K2Q8NGT1 345 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 RDH5Q92781 318 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 LSM10Q969L4 123 aaKnown RBP5.57□□□□□ -1.52
CSDE1-204ENST00000369530 APOBEC3DQ96AK3 386 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-204ENST00000369530 HARBI1Q96MB7 349 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 PECRQ9BY49 303 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 KCNIP2Q9NS61 270 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 THYN1Q9P016 225 aa5.57□□□□□ -1.52
CSDE1-204ENST00000369530 PIGBOS1A0A0B4J2F0 54 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 CTXND1A0A1B0GTU2 59 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 hADV38S2A0JD32 116 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 SLC17A3O00476 420 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 AMTP48728 403 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 LCN15Q6UWW0 184 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 ZNF562Q6V9R5 426 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 OSR2Q8N2R0 312 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 LY6G5BQ8NDX9 201 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 OR10X1Q8NGY0 326 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 IL1F10Q8WWZ1 152 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 CHRDL1Q9BU40 450 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 TMEM222Q9H0R3 208 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 WASHC3Q9Y3C0 194 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 LINC00312Q9Y6C7 94 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 MED13LQ71F56 2210 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 TEX48A0A1B0GUV7 120 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 A0A1W2PPM0 123 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 SIVA1O15304 175 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 CLEC3BP05452 202 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 GATA2P23769 480 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-204ENST00000369530 GPR12P47775 334 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 FUT6P51993 359 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 HERV-K104P61576 105 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 RPL32P62910 135 aaKnown RBP5.56□□□□□ -1.52
CSDE1-204ENST00000369530 EBLN2Q6P2I7 272 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 ZDHHC23Q8IYP9 409 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 ZNF439Q8NDP4 499 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 BLNKQ8WV28 456 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 GCM1Q9NP62 436 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 TSSC4Q9Y5U2 329 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-204ENST00000369530 KIAA2026Q5HYC2 2103 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 LOC102724200A0A096LPH7 203 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-204ENST00000369530 C9JCJ5 164 aa5.56□□□□□ -1.52
CSDE1-204ENST00000369530 WNT9BO14905 357 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms