RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 C20orf24Q9BUV8 137 aa10.63□□□□□ -0.71
TPM3-211ENST00000368531 TRAV30A0A087WSZ9 112 aa10.62□□□□□ -0.71
TPM3-211ENST00000368531 ZFP92A6NM28 416 aa10.62□□□□□ -0.71
TPM3-211ENST00000368531 SEC14L6B5MCN3 397 aa10.62□□□□□ -0.71
TPM3-211ENST00000368531 ZNF207O43670 478 aaKnown RBP10.62□□□□□ -0.71
TPM3-211ENST00000368531 P2RY1P47900 373 aa10.62□□□□□ -0.71
TPM3-211ENST00000368531 RAP2BP61225 183 aa10.62□□□□□ -0.71
TPM3-211ENST00000368531 NHLH2Q02577 135 aa10.62□□□□□ -0.71
TPM3-211ENST00000368531 RELQ04864 619 aaPredicted RBP10.62□□□□□ -0.71
TPM3-211ENST00000368531 UNQ9165/PRO28630Q6UXU0 137 aa10.62□□□□□ -0.71
TPM3-211ENST00000368531 STX12Q86Y82 276 aa10.62□□□□□ -0.71
TPM3-211ENST00000368531 GPHB5Q86YW7 130 aa10.62□□□□□ -0.71
TPM3-211ENST00000368531 WFDC9Q8NEX5 89 aa10.62□□□□□ -0.71
TPM3-211ENST00000368531 OR1S2Q8NGQ3 325 aa10.62□□□□□ -0.71
TPM3-211ENST00000368531 SLC25A31Q9H0C2 315 aa10.62□□□□□ -0.71
TPM3-211ENST00000368531 SMLR1H3BR10 107 aa10.61□□□□□ -0.71
TPM3-211ENST00000368531 SCGB2A1O75556 95 aa10.61□□□□□ -0.71
TPM3-211ENST00000368531 IGKV1-17P01599 117 aa10.61□□□□□ -0.71
TPM3-211ENST00000368531 IGLC1P0CG04 106 aa10.61□□□□□ -0.71
TPM3-211ENST00000368531 EDN2P20800 178 aa10.61□□□□□ -0.71
TPM3-211ENST00000368531 SULT1A1P50225 295 aa10.61□□□□□ -0.71
TPM3-211ENST00000368531 DLK1P80370 383 aa10.61□□□□□ -0.71
TPM3-211ENST00000368531 EWSR1Q01844 656 aaKnown RBP eCLIP10.61□□□□□ -0.71
TPM3-211ENST00000368531 SLC38A11Q08AI6 406 aa10.61□□□□□ -0.71
TPM3-211ENST00000368531 TM4SF20Q53R12 229 aa10.61□□□□□ -0.71
TPM3-211ENST00000368531 OXLD1Q5BKU9 147 aa10.61□□□□□ -0.71
TPM3-211ENST00000368531 ZNF600Q6ZNG1 722 aa10.61□□□□□ -0.71
TPM3-211ENST00000368531 OR9G4Q8NGQ1 327 aa10.61□□□□□ -0.71
TPM3-211ENST00000368531 OR2T35Q8NGX2 323 aa10.61□□□□□ -0.71
TPM3-211ENST00000368531 RCC1LQ96I51 464 aaKnown RBP10.61□□□□□ -0.71
TPM3-211ENST00000368531 SELENOKQ9Y6D0 94 aa10.61□□□□□ -0.71
TPM3-211ENST00000368531 A0A1B0GVG6 124 aa10.6□□□□□ -0.71
TPM3-211ENST00000368531 NDUFA4O00483 81 aa10.6□□□□□ -0.71
TPM3-211ENST00000368531 SAP30O75446 220 aa10.6□□□□□ -0.71
TPM3-211ENST00000368531 ZNF90Q03938 601 aa10.6□□□□□ -0.71
TPM3-211ENST00000368531 FGL1Q08830 312 aa10.6□□□□□ -0.71
TPM3-211ENST00000368531 OR2F1Q13607 317 aa10.6□□□□□ -0.71
TPM3-211ENST00000368531 LILRB2Q8N423 598 aa10.6□□□□□ -0.71
TPM3-211ENST00000368531 ZNF414Q96IQ9 312 aa10.6□□□□□ -0.71
TPM3-211ENST00000368531 ELOVL1Q9BW60 279 aa10.6□□□□□ -0.71
TPM3-211ENST00000368531 PEMTQ9UBM1 199 aa10.6□□□□□ -0.71
TPM3-211ENST00000368531 PUS1Q9Y606 427 aaKnown RBP eCLIP10.6□□□□□ -0.71
TPM3-211ENST00000368531 IGKV1D-37A0A075B6S9 117 aa10.59□□□□□ -0.71
TPM3-211ENST00000368531 FXYD6-FXYD2A0A087WZ82 144 aa10.59□□□□□ -0.71
TPM3-211ENST00000368531 IGHV3-49A0A0A0MS15 119 aa10.59□□□□□ -0.71
TPM3-211ENST00000368531 LGALS9O00182 355 aa10.59□□□□□ -0.71
TPM3-211ENST00000368531 RPL12P30050 165 aaKnown RBP10.59□□□□□ -0.71
TPM3-211ENST00000368531 HBG1P69891 147 aa10.59□□□□□ -0.71
TPM3-211ENST00000368531 HBG2P69892 147 aa10.59□□□□□ -0.71
TPM3-211ENST00000368531 TOMM20LQ6UXN7 152 aa10.59□□□□□ -0.71
TPM3-211ENST00000368531 REC114Q7Z4M0 266 aa10.59□□□□□ -0.71
TPM3-211ENST00000368531 TMEM144Q7Z5S9 345 aa10.59□□□□□ -0.71
TPM3-211ENST00000368531 Q8WTZ3 238 aa10.59□□□□□ -0.71
TPM3-211ENST00000368531 ASB13Q8WXK3 278 aa10.59□□□□□ -0.71
TPM3-211ENST00000368531 TMEM190Q8WZ59 177 aa10.59□□□□□ -0.71
TPM3-211ENST00000368531 MCRIP2Q9BUT9 160 aaKnown RBP10.59□□□□□ -0.71
TPM3-211ENST00000368531 IGKV1OR2-108A0A075B7D4 117 aa10.58□□□□□ -0.72
TPM3-211ENST00000368531 C2orf70A6NJV1 201 aa10.58□□□□□ -0.72
TPM3-211ENST00000368531 G3V4G9 280 aa10.58□□□□□ -0.72
TPM3-211ENST00000368531 CSN3P07498 182 aa10.58□□□□□ -0.72
TPM3-211ENST00000368531 RD3LP0DJH9 198 aa10.58□□□□□ -0.72
TPM3-211ENST00000368531 LYL1P12980 280 aa10.58□□□□□ -0.72
TPM3-211ENST00000368531 S100A11P31949 105 aa10.58□□□□□ -0.72
TPM3-211ENST00000368531 YPEL3P61236 119 aaPredicted RBP10.58□□□□□ -0.72
TPM3-211ENST00000368531 CLINT1Q14677 625 aa10.58□□□□□ -0.72
TPM3-211ENST00000368531 C9orf66Q5T8R8 295 aa10.58□□□□□ -0.72
TPM3-211ENST00000368531 IL34Q6ZMJ4 242 aa10.58□□□□□ -0.72
TPM3-211ENST00000368531 THAP8Q8NA92 274 aa10.58□□□□□ -0.72
TPM3-211ENST00000368531 OR5C1Q8NGR4 320 aa10.58□□□□□ -0.72
TPM3-211ENST00000368531 SMIM3Q9BZL3 60 aa10.58□□□□□ -0.72
TPM3-211ENST00000368531 NPVFQ9HCQ7 196 aa10.58□□□□□ -0.72
TPM3-211ENST00000368531 UFC1Q9Y3C8 167 aa10.58□□□□□ -0.72
TPM3-211ENST00000368531 UBE2L5PA0A1B0GUS4 154 aa10.57□□□□□ -0.72
TPM3-211ENST00000368531 TMEM213A2RRL7 107 aa10.57□□□□□ -0.72
TPM3-211ENST00000368531 SCAF4O95104 1147 aaKnown RBP10.57□□□□□ -0.72
TPM3-211ENST00000368531 TOMM40O96008 361 aa10.57□□□□□ -0.72
TPM3-211ENST00000368531 PSG1P11464 419 aa10.57□□□□□ -0.72
TPM3-211ENST00000368531 FOLR2P14207 255 aa10.57□□□□□ -0.72
TPM3-211ENST00000368531 GATA2P23769 480 aaPredicted RBP10.57□□□□□ -0.72
TPM3-211ENST00000368531 NUP62P37198 522 aaPredicted RBP10.57□□□□□ -0.72
TPM3-211ENST00000368531 TRGV9Q99603 122 aa10.57□□□□□ -0.72
TPM3-211ENST00000368531 TMEM147Q9BVK8 224 aa10.57□□□□□ -0.72
TPM3-211ENST00000368531 GGACTQ9BVM4 153 aa10.57□□□□□ -0.72
TPM3-211ENST00000368531 ZFAND3Q9H8U3 227 aa10.57□□□□□ -0.72
TPM3-211ENST00000368531 UQCC1Q9NVA1 299 aa10.57□□□□□ -0.72
TPM3-211ENST00000368531 HSPB11Q9Y547 144 aa10.57□□□□□ -0.72
TPM3-211ENST00000368531 IGHV3OR16-13A0A075B7E8 117 aa10.56□□□□□ -0.72
TPM3-211ENST00000368531 IGHV3-74A0A0B4J1X5 117 aa10.56□□□□□ -0.72
TPM3-211ENST00000368531 FNDC10F2Z333 226 aa10.56□□□□□ -0.72
TPM3-211ENST00000368531 IL4P05112 153 aa10.56□□□□□ -0.72
TPM3-211ENST00000368531 FABP1P07148 127 aa10.56□□□□□ -0.72
TPM3-211ENST00000368531 CBLN1P23435 193 aa10.56□□□□□ -0.72
TPM3-211ENST00000368531 BAXQ07812 192 aa10.56□□□□□ -0.72
TPM3-211ENST00000368531 ATP6V1FQ16864 119 aa10.56□□□□□ -0.72
TPM3-211ENST00000368531 TEPPQ6URK8 271 aa10.56□□□□□ -0.72
TPM3-211ENST00000368531 ADAMTSL5Q6ZMM2 481 aa10.56□□□□□ -0.72
TPM3-211ENST00000368531 TMEM182Q6ZP80 229 aaPredicted RBP10.56□□□□□ -0.72
TPM3-211ENST00000368531 ZNF546Q86UE3 836 aa10.56□□□□□ -0.72
TPM3-211ENST00000368531 OR51G1Q8NGK1 321 aa10.56□□□□□ -0.72
TPM3-211ENST00000368531 DYNLRB2Q8TF09 96 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms